RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 YY1AP1Q9H869 796 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 REEP1Q9H902 201 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 CCNB1IP1Q9NPC3 277 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 IL1RAPQ9NPH3 570 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 GLTPQ9NZD2 209 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 B3GAT1Q9P2W7 334 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 IL36RNQ9UBH0 155 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 MOKQ9UQ07 419 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 SAMHD1Q9Y3Z3 626 aaKnown RBP4.04□□□□□ -1.76
ATXN3-220ENST00000553491 APCP25054 2843 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 CR1P17927 2039 aa4.04□□□□□ -1.76
ATXN3-220ENST00000553491 HRNRQ86YZ3 2850 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-220ENST00000553491 ANKHD1Q8IWZ3 2542 aaKnown RBP4.03□□□□□ -1.76
ATXN3-220ENST00000553491 LOC102725191A0A1B0GVB3 256 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 IQCMA0A1B0GVH7 501 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 HTR3EA5X5Y0 456 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 A6NIZ1 184 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 ZNF99A8MXY4 864 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-220ENST00000553491 INAFM1C9JVW0 142 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 CTDSP2O14595 271 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 CDC42EP2O14613 210 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 HS3ST1O14792 307 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 SPRY3O43610 288 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 TRAF3IP2O43734 574 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-220ENST00000553491 SLC16A7O60669 478 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 KRT36O76013 467 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 ZNF432O94892 652 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 NDUFB2O95178 105 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 SLC2A10O95528 541 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 PPP1R3DO95685 299 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 RAB36O95755 333 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 TOMM40O96008 361 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 RENP00797 406 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 OR8G3PP0DMU2 310 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 PRKACGP22612 351 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 PTAFRP25105 342 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 CCKARP32238 428 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 ARHGDIAP52565 204 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 MFAP4P55083 255 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 CDH11P55287 796 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 SH3BGRP55822 239 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-220ENST00000553491 RAP1BP61224 184 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 RAP1AP62834 184 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 GALK2Q01415 458 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 HSF2Q03933 536 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 RUNX1T1Q06455 604 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 FMODQ06828 376 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 SPOCK1Q08629 439 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 BNIP1Q12981 228 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 CARTPTQ16568 116 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 GSG1Q2KHT4 349 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 PCGF3Q3KNV8 242 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 CLEC12AQ5QGZ9 265 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 C1orf146Q5VVC0 180 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 OTPQ5XKR4 325 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 GGNBP1Q5YKI7 109 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 SIGIRRQ6IA17 410 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 OR2T5Q6IEZ7 315 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 TMPRSS11FQ6ZWK6 438 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 SLC16A14Q7RTX9 510 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 HDDC2Q7Z4H3 204 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 TSEN54Q7Z6J9 526 aaKnown RBP4.03□□□□□ -1.76
ATXN3-220ENST00000553491 MDP1Q86V88 176 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 LINC00346Q8IVM7 164 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 WDFY1Q8IWB7 410 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 FOXRED2Q8IWF2 684 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 SKA3Q8IX90 412 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 TMEM123Q8N131 208 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 SLC22A24Q8N4F4 322 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 CLDN22Q8N7P3 220 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 POC5Q8NA72 575 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 OR2T29Q8NH02 315 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 OR4K13Q8NH42 304 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 GIPC3Q8TF64 312 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 SMAP2Q8WU79 429 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-220ENST00000553491 CANT1Q8WVQ1 401 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 TMEM54Q969K7 222 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 PIGTQ969N2 578 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 RASD2Q96D21 266 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 ASB9Q96DX5 294 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 LRR1Q96L50 414 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 Q96M85 177 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 HARBI1Q96MB7 349 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 SLC38A2Q96QD8 506 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 PCGF1Q9BSM1 259 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 CHID1Q9BWS9 393 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 KRTAP1-5Q9BYS1 174 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 OR10A4Q9H209 315 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 LRMDAQ9H2I8 198 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 PLEKHF2Q9H8W4 249 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 ZNF556Q9HAH1 456 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 MAN2C1Q9NTJ4 1040 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 NPAP1Q9NZP6 1156 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 PDP1Q9P0J1 537 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-220ENST00000553491 STX18Q9P2W9 335 aaKnown RBP4.03□□□□□ -1.76
ATXN3-220ENST00000553491 MALT1Q9UDY8 824 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 MGAT4BQ9UQ53 548 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 N6AMT1Q9Y5N5 214 aa4.03□□□□□ -1.76
ATXN3-220ENST00000553491 MAGED1Q9Y5V3 778 aaPredicted RBP4.03□□□□□ -1.76
ATXN3-220ENST00000553491 SLC25A15Q9Y619 301 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms