RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 EDF1O60869 148 aaKnown RBP4.09□□□□□ -1.75
ATXN3-218ENST00000553309 SCN2BO60939 215 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 KRT33AO76009 404 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 SOD1P00441 154 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 C2P06681 752 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 NBEAP1P0C6P0 100 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 METTL15P1P0C7V9 234 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 VPREB1P12018 145 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 CA6P23280 308 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 GABRR1P24046 479 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 HLA-DMAP28067 261 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 GTF2E2P29084 291 aaKnown RBP4.09□□□□□ -1.75
ATXN3-218ENST00000553309 SLC6A6P31641 620 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 S100A11P31949 105 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 OTX1P32242 354 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-218ENST00000553309 MC5RP33032 325 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 ARR3P36575 388 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 RGRP47804 291 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 TGM4P49221 684 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 ATP5IP56385 69 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-218ENST00000553309 UBE2G2P60604 165 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 PKIAP61925 76 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 NPRL3Q12980 569 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 ECH1Q13011 328 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 TSTA3Q13630 321 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-218ENST00000553309 TRAM1Q15629 374 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 ATP6AP1Q15904 470 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 HFEQ30201 348 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 HIKESHIQ53FT3 197 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 XKR6Q5GH73 641 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 BEX5Q5H9J7 111 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 C9orf152Q5JTZ5 239 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 REP15Q6BDI9 236 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 LPCAT3Q6P1A2 487 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 MED27Q6P2C8 311 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 ULK3Q6PHR2 472 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 AFTPHQ6ULP2 937 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 TEX261Q6UWH6 196 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 CARM1Q86X55 608 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 ANGPTL5Q86XS5 388 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 CNTN4Q8IWV2 1026 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 ZNF440Q8IYI8 595 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 C8orf59Q8N0T1 100 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-218ENST00000553309 C9orf62Q8N4C0 152 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 FAM89BQ8N5H3 189 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 COMMD1Q8N668 190 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 GDPD1Q8N9F7 314 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 OR10Q1Q8NGQ4 319 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 OR4C3Q8NH37 302 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 SLC7A6Q92536 515 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 AP3S1Q92572 193 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 HAS2Q92819 552 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 FAM162AQ96A26 154 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 MRGPRFQ96AM1 343 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 RASD2Q96D21 266 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 FAM120BQ96EK7 910 aaKnown RBP4.09□□□□□ -1.75
ATXN3-218ENST00000553309 DTD2Q96FN9 168 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 HYLS1Q96M11 299 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 SFXN2Q96NB2 322 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 PKP2Q99959 881 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 VGLL1Q99990 258 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 TTYH2Q9BSA4 534 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 UGT2B28Q9BY64 529 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 PCBD2Q9H0N5 130 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 DPAGT1Q9H3H5 408 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 KIR3DX1Q9H7L2 352 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 NOL11Q9H8H0 719 aaKnown RBP4.09□□□□□ -1.75
ATXN3-218ENST00000553309 SIRT7Q9NRC8 400 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 PIGVQ9NUD9 493 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 ZNF701Q9NV72 531 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-218ENST00000553309 PAK1IP1Q9NWT1 392 aaPredicted RBP4.09□□□□□ -1.75
ATXN3-218ENST00000553309 RDH8Q9NYR8 311 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 PAK5Q9P286 719 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 DHCR7Q9UBM7 475 aaKnown RBP4.09□□□□□ -1.75
ATXN3-218ENST00000553309 METTL1Q9UBP6 276 aaKnown RBP4.09□□□□□ -1.75
ATXN3-218ENST00000553309 PCYOX1Q9UHG3 505 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 C3orf18Q9UK00 162 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 FBXO5Q9UKT4 447 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 POFUT2Q9Y2G5 429 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 PEX16Q9Y5Y5 336 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 U3KQ87 197 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 TRRAPQ9Y4A5 3859 aa4.09□□□□□ -1.75
ATXN3-218ENST00000553309 IGLV7-46A0A075B6I9 117 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 A0A1B0GTH9 108 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 TRBC2A0A5B9 178 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 OR5H15A6NDH6 313 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 C5orf52A6NGY3 159 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 AGAP14A8MT82 685 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 A8MXK9 166 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 SUPT3HB4E1H0 165 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 E7EQ34 232 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 NPIPA7E9PJI5 369 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 E9PQ18 207 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 TSTD3H0UI37 97 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 KLF11O14901 512 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 SIGLEC5O15389 551 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 CFLARO15519 480 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 OR10H3O60404 316 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 SELENOFO60613 162 aa4.08□□□□□ -1.76
ATXN3-218ENST00000553309 GGCTO75223 188 aaKnown RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms