RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 FFAR1O14842 300 aa14.28□□□□□ -0.12
RBFOX1-212ENST00000550418 SPP1P10451 314 aa14.28□□□□□ -0.12
RBFOX1-212ENST00000550418 EMDP50402 254 aa14.28□□□□□ -0.12
RBFOX1-212ENST00000550418 TIAL1Q01085 375 aaKnown RBP eCLIP14.28□□□□□ -0.12
RBFOX1-212ENST00000550418 IQCJQ1A5X6 159 aa14.28□□□□□ -0.12
RBFOX1-212ENST00000550418 TMPRSS7Q7RTY8 843 aa14.28□□□□□ -0.12
RBFOX1-212ENST00000550418 CMBLQ96DG6 245 aa14.28□□□□□ -0.12
RBFOX1-212ENST00000550418 ZNF426Q9BUY5 554 aa14.28□□□□□ -0.12
RBFOX1-212ENST00000550418 SEC11CQ9BY50 192 aa14.28□□□□□ -0.12
RBFOX1-212ENST00000550418 MBNL1Q9NR56 388 aaKnown RBP14.28□□□□□ -0.12
RBFOX1-212ENST00000550418 B9D1Q9UPM9 204 aa14.28□□□□□ -0.12
RBFOX1-212ENST00000550418 IGLV3-16A0A075B6K0 115 aa14.28□□□□□ -0.12
RBFOX1-212ENST00000550418 SEC14L6B5MCN3 397 aa14.28□□□□□ -0.12
RBFOX1-212ENST00000550418 ABCD3P28288 659 aa14.28□□□□□ -0.12
RBFOX1-212ENST00000550418 RBP2P50120 134 aa14.28□□□□□ -0.12
RBFOX1-212ENST00000550418 AGBL4Q5VU57 503 aa14.28□□□□□ -0.12
RBFOX1-212ENST00000550418 PWWP2BQ6NUJ5 590 aa14.28□□□□□ -0.12
RBFOX1-212ENST00000550418 TFAP2EQ6VUC0 442 aa14.28□□□□□ -0.12
RBFOX1-212ENST00000550418 MAGT1Q9H0U3 335 aa14.28□□□□□ -0.12
RBFOX1-212ENST00000550418 TXNIPQ9H3M7 391 aa14.28□□□□□ -0.12
RBFOX1-212ENST00000550418 GPR160Q9UJ42 338 aa14.28□□□□□ -0.12
RBFOX1-212ENST00000550418 PNLIPRP3Q17RR3 467 aa14.28□□□□□ -0.12
RBFOX1-212ENST00000550418 SLC25A30Q5SVS4 291 aa14.28□□□□□ -0.12
RBFOX1-212ENST00000550418 BTNL8Q6UX41 500 aa14.28□□□□□ -0.12
RBFOX1-212ENST00000550418 SIGLECL1Q8N7X8 197 aa14.28□□□□□ -0.12
RBFOX1-212ENST00000550418 VN1R2Q8NFZ6 395 aa14.28□□□□□ -0.12
RBFOX1-212ENST00000550418 BSCL2Q96G97 398 aaPredicted RBP14.28□□□□□ -0.12
RBFOX1-212ENST00000550418 KCNJ15Q99712 375 aa14.28□□□□□ -0.12
RBFOX1-212ENST00000550418 FGF22Q9HCT0 170 aa14.28□□□□□ -0.12
RBFOX1-212ENST00000550418 POMT1Q9Y6A1 747 aa14.28□□□□□ -0.12
RBFOX1-212ENST00000550418 CLDN34H7C241 214 aa14.27□□□□□ -0.12
RBFOX1-212ENST00000550418 DUS4LO95620 317 aaKnown RBP14.27□□□□□ -0.12
RBFOX1-212ENST00000550418 CTXN2P0C2S0 81 aa14.27□□□□□ -0.12
RBFOX1-212ENST00000550418 CXCL12P48061 93 aa14.27□□□□□ -0.12
RBFOX1-212ENST00000550418 RANP62826 216 aaKnown RBP14.27□□□□□ -0.12
RBFOX1-212ENST00000550418 RAB32Q13637 225 aa14.27□□□□□ -0.12
RBFOX1-212ENST00000550418 ETFDHQ16134 617 aa14.27□□□□□ -0.12
RBFOX1-212ENST00000550418 NCMAPQ5T1S8 102 aa14.27□□□□□ -0.12
RBFOX1-212ENST00000550418 PRSS54Q6PEW0 395 aa14.27□□□□□ -0.12
RBFOX1-212ENST00000550418 ZNF66Q6ZN08 573 aa14.27□□□□□ -0.12
RBFOX1-212ENST00000550418 SSX7Q7RTT5 188 aa14.27□□□□□ -0.12
RBFOX1-212ENST00000550418 TEX101Q9BY14 249 aa14.27□□□□□ -0.12
RBFOX1-212ENST00000550418 GHITMQ9H3K2 345 aa14.27□□□□□ -0.12
RBFOX1-212ENST00000550418 HEYLQ9NQ87 328 aaPredicted RBP14.27□□□□□ -0.12
RBFOX1-212ENST00000550418 GPR173Q9NS66 373 aa14.27□□□□□ -0.12
RBFOX1-212ENST00000550418 KIAA1217Q5T5P2 1943 aa14.27□□□□□ -0.12
RBFOX1-212ENST00000550418 CCDC187A0A096LP49 1063 aa14.27□□□□□ -0.12
RBFOX1-212ENST00000550418 H3BNC9 293 aa14.27□□□□□ -0.12
RBFOX1-212ENST00000550418 OTX2P32243 289 aa14.27□□□□□ -0.12
RBFOX1-212ENST00000550418 VAMP3Q15836 100 aa14.27□□□□□ -0.12
RBFOX1-212ENST00000550418 OTOSQ8NHW6 89 aa14.27□□□□□ -0.12
RBFOX1-212ENST00000550418 PBOV1Q9GZY1 135 aa14.27□□□□□ -0.12
RBFOX1-212ENST00000550418 FPR2P25090 351 aa14.27□□□□□ -0.13
RBFOX1-212ENST00000550418 FABP6P51161 128 aa14.27□□□□□ -0.13
RBFOX1-212ENST00000550418 SPANXN5Q5MJ07 72 aa14.27□□□□□ -0.13
RBFOX1-212ENST00000550418 LIMS2Q7Z4I7 341 aa14.27□□□□□ -0.13
RBFOX1-212ENST00000550418 STRADBQ9C0K7 418 aa14.27□□□□□ -0.13
RBFOX1-212ENST00000550418 ZNF331Q9NQX6 463 aaPredicted RBP14.27□□□□□ -0.13
RBFOX1-212ENST00000550418 MCTS1Q9ULC4 181 aaKnown RBP14.27□□□□□ -0.13
RBFOX1-212ENST00000550418 CBY3A6NI87 242 aa14.27□□□□□ -0.13
RBFOX1-212ENST00000550418 ARPC3O15145 178 aa14.27□□□□□ -0.13
RBFOX1-212ENST00000550418 ZNF217O75362 1048 aa14.27□□□□□ -0.13
RBFOX1-212ENST00000550418 POU3F2P20265 443 aaPredicted RBP14.27□□□□□ -0.13
RBFOX1-212ENST00000550418 GZMMP51124 257 aa14.27□□□□□ -0.13
RBFOX1-212ENST00000550418 NOVA1P51513 510 aaKnown RBP14.27□□□□□ -0.13
RBFOX1-212ENST00000550418 KLF9Q13886 244 aaPredicted RBP14.27□□□□□ -0.13
RBFOX1-212ENST00000550418 LHX8Q68G74 356 aa14.27□□□□□ -0.13
RBFOX1-212ENST00000550418 OVCH2Q7RTZ1 564 aa14.27□□□□□ -0.13
RBFOX1-212ENST00000550418 ABHD5Q8WTS1 349 aa14.27□□□□□ -0.13
RBFOX1-212ENST00000550418 LINC00615Q96LM1 132 aaPredicted RBP14.27□□□□□ -0.13
RBFOX1-212ENST00000550418 HIPK2Q9H2X6 1198 aa14.27□□□□□ -0.13
RBFOX1-212ENST00000550418 DHCR7Q9UBM7 475 aaKnown RBP14.27□□□□□ -0.13
RBFOX1-212ENST00000550418 A0A1W2PPH5 198 aa14.26□□□□□ -0.13
RBFOX1-212ENST00000550418 IGHA1P01876 353 aa14.26□□□□□ -0.13
RBFOX1-212ENST00000550418 NMBP08949 121 aa14.26□□□□□ -0.13
RBFOX1-212ENST00000550418 RAB5AP20339 215 aa14.26□□□□□ -0.13
RBFOX1-212ENST00000550418 NTF3P20783 257 aa14.26□□□□□ -0.13
RBFOX1-212ENST00000550418 KCNAB1Q14722 419 aa14.26□□□□□ -0.13
RBFOX1-212ENST00000550418 IL22RA1Q8N6P7 574 aa14.26□□□□□ -0.13
RBFOX1-212ENST00000550418 C4orf45Q96LM5 186 aa14.26□□□□□ -0.13
RBFOX1-212ENST00000550418 MAP3K3Q99759 626 aa14.26□□□□□ -0.13
RBFOX1-212ENST00000550418 CHST11Q9NPF2 352 aa14.26□□□□□ -0.13
RBFOX1-212ENST00000550418 MYOTQ9UBF9 498 aa14.26□□□□□ -0.13
RBFOX1-212ENST00000550418 A0A0B4J2E0 115 aa14.26□□□□□ -0.13
RBFOX1-212ENST00000550418 A0A1B0GX12 115 aa14.26□□□□□ -0.13
RBFOX1-212ENST00000550418 ZNF320A2RRD8 509 aa14.26□□□□□ -0.13
RBFOX1-212ENST00000550418 CDC42EP2O14613 210 aa14.26□□□□□ -0.13
RBFOX1-212ENST00000550418 EIF1BO60739 113 aaKnown RBP14.26□□□□□ -0.13
RBFOX1-212ENST00000550418 DRD1P21728 446 aa14.26□□□□□ -0.13
RBFOX1-212ENST00000550418 PPIAP62937 165 aaKnown RBP14.26□□□□□ -0.13
RBFOX1-212ENST00000550418 THSD4Q6ZMP0 1018 aa14.26□□□□□ -0.13
RBFOX1-212ENST00000550418 ISOC2Q96AB3 205 aa14.26□□□□□ -0.13
RBFOX1-212ENST00000550418 TRMT61AQ96FX7 289 aaKnown RBP14.26□□□□□ -0.13
RBFOX1-212ENST00000550418 TBC1D29Q9UFV1 150 aa14.26□□□□□ -0.13
RBFOX1-212ENST00000550418 DLEC1Q9Y238 1755 aa14.26□□□□□ -0.13
RBFOX1-212ENST00000550418 A0A087X0M5 115 aa14.26□□□□□ -0.13
RBFOX1-212ENST00000550418 TMEM272A0A1B0GTI8 110 aa14.26□□□□□ -0.13
RBFOX1-212ENST00000550418 A0A1B0GX30 115 aa14.26□□□□□ -0.13
RBFOX1-212ENST00000550418 IDSB3KWA1 339 aa14.26□□□□□ -0.13
RBFOX1-212ENST00000550418 MRPL33O75394 65 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms