RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 PDFQ9HBH1 243 aa4.01□□□□□ -1.77
HCFC2-204ENST00000550335 CACNG2Q9Y698 323 aa4.01□□□□□ -1.77
HCFC2-204ENST00000550335 SMAD5-AS1Q9Y6J3 95 aa4.01□□□□□ -1.77
HCFC2-204ENST00000550335 ADAMTSL1Q8N6G6 1762 aa4.01□□□□□ -1.77
HCFC2-204ENST00000550335 CCDC88AQ3V6T2 1871 aa4.01□□□□□ -1.77
HCFC2-204ENST00000550335 DENND4AQ7Z401 1863 aa4.01□□□□□ -1.77
HCFC2-204ENST00000550335 COL4A5P29400 1685 aa4□□□□□ -1.77
HCFC2-204ENST00000550335 A0A1B0GUH1 482 aa4□□□□□ -1.77
HCFC2-204ENST00000550335 FAM166BA8MTA8 275 aa4□□□□□ -1.77
HCFC2-204ENST00000550335 H0YHG0 523 aa4□□□□□ -1.77
HCFC2-204ENST00000550335 LAD1O00515 517 aa4□□□□□ -1.77
HCFC2-204ENST00000550335 NVLO15381 856 aaKnown RBP4□□□□□ -1.77
HCFC2-204ENST00000550335 SPOPO43791 374 aa4□□□□□ -1.77
HCFC2-204ENST00000550335 MPDU1O75352 247 aa4□□□□□ -1.77
HCFC2-204ENST00000550335 TDP2O95551 362 aa4□□□□□ -1.77
HCFC2-204ENST00000550335 CT45A6P0DMU7 189 aa4□□□□□ -1.77
HCFC2-204ENST00000550335 CT45A5P0DMU8 189 aa4□□□□□ -1.77
HCFC2-204ENST00000550335 CT45A7P0DMV0 189 aa4□□□□□ -1.77
HCFC2-204ENST00000550335 SMIM10L1P0DMW3 83 aa4□□□□□ -1.77
HCFC2-204ENST00000550335 RAB3BP20337 219 aa4□□□□□ -1.77
HCFC2-204ENST00000550335 SEMG2Q02383 582 aa4□□□□□ -1.77
HCFC2-204ENST00000550335 CT45A1Q5HYN5 189 aa4□□□□□ -1.77
HCFC2-204ENST00000550335 FAM71AQ8IYT1 594 aa4□□□□□ -1.77
HCFC2-204ENST00000550335 OR52E2Q8NGJ4 325 aa4□□□□□ -1.77
HCFC2-204ENST00000550335 OR10J6PQ8NGY7 276 aa4□□□□□ -1.77
HCFC2-204ENST00000550335 CT45A3Q8NHU0 189 aa4□□□□□ -1.77
HCFC2-204ENST00000550335 ZNF596Q8TC21 504 aa4□□□□□ -1.77
HCFC2-204ENST00000550335 SMIM10Q96HG1 83 aa4□□□□□ -1.77
HCFC2-204ENST00000550335 ZIM3Q96PE6 472 aa4□□□□□ -1.77
HCFC2-204ENST00000550335 EDA2RQ9HAV5 297 aa4□□□□□ -1.77
HCFC2-204ENST00000550335 PRSS16Q9NQE7 514 aa4□□□□□ -1.77
HCFC2-204ENST00000550335 CLN6Q9NWW5 311 aa4□□□□□ -1.77
HCFC2-204ENST00000550335 SLC39A1Q9NY26 324 aa4□□□□□ -1.77
HCFC2-204ENST00000550335 SCN2AQ99250 2005 aa4□□□□□ -1.77
HCFC2-204ENST00000550335 ZNF646O15015 1829 aaPredicted RBP4□□□□□ -1.77
HCFC2-204ENST00000550335 CACNA1SQ13698 1873 aa3.99□□□□□ -1.77
HCFC2-204ENST00000550335 TRAV6A0A075B6T7 132 aa3.99□□□□□ -1.77
HCFC2-204ENST00000550335 SYCE1LA8MT33 242 aa3.99□□□□□ -1.77
HCFC2-204ENST00000550335 CENPXA8MT69 81 aa3.99□□□□□ -1.77
HCFC2-204ENST00000550335 NME4O00746 187 aa3.99□□□□□ -1.77
HCFC2-204ENST00000550335 CDC40O60508 579 aaKnown RBP eCLIP3.99□□□□□ -1.77
HCFC2-204ENST00000550335 CA11O75493 328 aa3.99□□□□□ -1.77
HCFC2-204ENST00000550335 CIAO1O76071 339 aa3.99□□□□□ -1.77
HCFC2-204ENST00000550335 GABARAPO95166 117 aa3.99□□□□□ -1.77
HCFC2-204ENST00000550335 PRPS2P11908 318 aa3.99□□□□□ -1.77
HCFC2-204ENST00000550335 HOXB8P17481 243 aaPredicted RBP3.99□□□□□ -1.77
HCFC2-204ENST00000550335 RCC1P18754 421 aaPredicted RBP3.99□□□□□ -1.77
HCFC2-204ENST00000550335 IL32P24001 234 aa3.99□□□□□ -1.77
HCFC2-204ENST00000550335 CFHR2P36980 270 aa3.99□□□□□ -1.77
HCFC2-204ENST00000550335 CDH17Q12864 832 aa3.99□□□□□ -1.77
HCFC2-204ENST00000550335 PSG7Q13046 419 aa3.99□□□□□ -1.77
HCFC2-204ENST00000550335 ART3Q13508 389 aa3.99□□□□□ -1.77
HCFC2-204ENST00000550335 DGCR6Q14129 220 aa3.99□□□□□ -1.77
HCFC2-204ENST00000550335 RPEL1Q2QD12 228 aa3.99□□□□□ -1.77
HCFC2-204ENST00000550335 THEM4Q5T1C6 240 aa3.99□□□□□ -1.77
HCFC2-204ENST00000550335 HES5Q5TA89 166 aa3.99□□□□□ -1.77
HCFC2-204ENST00000550335 SLC25A25Q6KCM7 469 aa3.99□□□□□ -1.77
HCFC2-204ENST00000550335 COX15Q7KZN9 410 aa3.99□□□□□ -1.77
HCFC2-204ENST00000550335 HORMAD1Q86X24 394 aa3.99□□□□□ -1.77
HCFC2-204ENST00000550335 C11orf53Q8IXP5 236 aa3.99□□□□□ -1.77
HCFC2-204ENST00000550335 ARHGAP18Q8N392 663 aa3.99□□□□□ -1.77
HCFC2-204ENST00000550335 TRIML2Q8N7C3 387 aa3.99□□□□□ -1.77
HCFC2-204ENST00000550335 OR4S2Q8NH73 311 aa3.99□□□□□ -1.77
HCFC2-204ENST00000550335 TOP1MTQ969P6 601 aa3.99□□□□□ -1.77
HCFC2-204ENST00000550335 NRTNQ99748 197 aa3.99□□□□□ -1.77
HCFC2-204ENST00000550335 UQCC2Q9BRT2 126 aa3.99□□□□□ -1.77
HCFC2-204ENST00000550335 CDC42EP4Q9H3Q1 356 aaKnown RBP3.99□□□□□ -1.77
HCFC2-204ENST00000550335 CD209Q9NNX6 404 aa3.99□□□□□ -1.77
HCFC2-204ENST00000550335 AGPAT3Q9NRZ7 376 aa3.99□□□□□ -1.77
HCFC2-204ENST00000550335 FAM49BQ9NUQ9 324 aa3.99□□□□□ -1.77
HCFC2-204ENST00000550335 UVRAGQ9P2Y5 699 aa3.99□□□□□ -1.77
HCFC2-204ENST00000550335 MYH3P11055 1940 aa3.99□□□□□ -1.77
HCFC2-204ENST00000550335 COL4A1P02462 1669 aa3.98□□□□□ -1.77
HCFC2-204ENST00000550335 ZNFX1Q9P2E3 1918 aaKnown RBP3.98□□□□□ -1.77
HCFC2-204ENST00000550335 H7C1H1 209 aa3.98□□□□□ -1.77
HCFC2-204ENST00000550335 K7EMT4 169 aa3.98□□□□□ -1.77
HCFC2-204ENST00000550335 GABRPO00591 440 aa3.98□□□□□ -1.77
HCFC2-204ENST00000550335 SLC25A27O95847 323 aa3.98□□□□□ -1.77
HCFC2-204ENST00000550335 WARSP23381 471 aaKnown RBP3.98□□□□□ -1.77
HCFC2-204ENST00000550335 YWHAEP62258 255 aaKnown RBP3.98□□□□□ -1.77
HCFC2-204ENST00000550335 HMGCS1Q01581 520 aa3.98□□□□□ -1.77
HCFC2-204ENST00000550335 CAPRIN1Q14444 709 aaKnown RBP3.98□□□□□ -1.77
HCFC2-204ENST00000550335 GINS1Q14691 196 aa3.98□□□□□ -1.77
HCFC2-204ENST00000550335 RGNQ15493 299 aa3.98□□□□□ -1.77
HCFC2-204ENST00000550335 POU2AF1Q16633 256 aa3.98□□□□□ -1.77
HCFC2-204ENST00000550335 FAM83EQ2M2I3 478 aa3.98□□□□□ -1.77
HCFC2-204ENST00000550335 DEFB115Q30KQ5 88 aa3.98□□□□□ -1.77
HCFC2-204ENST00000550335 LCE1FQ5T754 118 aa3.98□□□□□ -1.77
HCFC2-204ENST00000550335 UBE2UQ5VVX9 321 aa3.98□□□□□ -1.77
HCFC2-204ENST00000550335 PLET1Q6UQ28 207 aa3.98□□□□□ -1.77
HCFC2-204ENST00000550335 C6orf120Q7Z4R8 191 aa3.98□□□□□ -1.77
HCFC2-204ENST00000550335 ABHD12BQ7Z5M8 362 aaPredicted RBP3.98□□□□□ -1.77
HCFC2-204ENST00000550335 CAMK2N1Q7Z7J9 78 aa3.98□□□□□ -1.77
HCFC2-204ENST00000550335 UNC93AQ86WB7 457 aa3.98□□□□□ -1.77
HCFC2-204ENST00000550335 PRSS58Q8IYP2 241 aa3.98□□□□□ -1.77
HCFC2-204ENST00000550335 ARRDC1Q8N5I2 433 aa3.98□□□□□ -1.77
HCFC2-204ENST00000550335 CHST4Q8NCG5 386 aa3.98□□□□□ -1.77
HCFC2-204ENST00000550335 ITFG1Q8TB96 612 aa3.98□□□□□ -1.77
HCFC2-204ENST00000550335 CREB3L1Q96BA8 519 aa3.98□□□□□ -1.77
HCFC2-204ENST00000550335 DCPSQ96C86 337 aaKnown RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms