RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 EXOGQ9Y2C4 368 aaKnown RBP16.45■□□□□ 0.22
DDX54-207ENST00000550016 IGHV1-69-2A0A0G2JMI3 117 aa16.44■□□□□ 0.22
DDX54-207ENST00000550016 A0A1B0GWJ7 208 aa16.44■□□□□ 0.22
DDX54-207ENST00000550016 VWC2LB2RUY7 222 aa16.44■□□□□ 0.22
DDX54-207ENST00000550016 J3QRE1 110 aa16.44■□□□□ 0.22
DDX54-207ENST00000550016 MAGEB4O15481 346 aaPredicted RBP16.44■□□□□ 0.22
DDX54-207ENST00000550016 LILRA1O75019 489 aa16.44■□□□□ 0.22
DDX54-207ENST00000550016 KRT8P05787 483 aa16.44■□□□□ 0.22
DDX54-207ENST00000550016 DBTP11182 482 aaKnown RBP16.44■□□□□ 0.22
DDX54-207ENST00000550016 ACHEP22303 614 aa16.44■□□□□ 0.22
DDX54-207ENST00000550016 DDOSTP39656 456 aa16.44■□□□□ 0.22
DDX54-207ENST00000550016 CRYBB2P43320 205 aa16.44■□□□□ 0.22
DDX54-207ENST00000550016 MMP16P51512 607 aa16.44■□□□□ 0.22
DDX54-207ENST00000550016 ZNF91Q05481 1191 aa16.44■□□□□ 0.22
DDX54-207ENST00000550016 RIPK1Q13546 671 aa16.44■□□□□ 0.22
DDX54-207ENST00000550016 OR8B12Q8NGG6 310 aa16.44■□□□□ 0.22
DDX54-207ENST00000550016 APH1BQ8WW43 257 aa16.44■□□□□ 0.22
DDX54-207ENST00000550016 YIPF5Q969M3 257 aa16.44■□□□□ 0.22
DDX54-207ENST00000550016 LGALS12Q96DT0 336 aa16.44■□□□□ 0.22
DDX54-207ENST00000550016 COX4I2Q96KJ9 171 aa16.44■□□□□ 0.22
DDX54-207ENST00000550016 CHODLQ9H9P2 273 aa16.44■□□□□ 0.22
DDX54-207ENST00000550016 RPL36Q9Y3U8 105 aaKnown RBP16.44■□□□□ 0.22
DDX54-207ENST00000550016 METTL15A6NJ78 407 aa16.43■□□□□ 0.22
DDX54-207ENST00000550016 H0YJX3 145 aa16.43■□□□□ 0.22
DDX54-207ENST00000550016 SMAD7O15105 426 aaKnown RBP16.43■□□□□ 0.22
DDX54-207ENST00000550016 WBP4O75554 376 aaKnown RBP16.43■□□□□ 0.22
DDX54-207ENST00000550016 SULT1C4O75897 302 aa16.43■□□□□ 0.22
DDX54-207ENST00000550016 INHBBP09529 407 aa16.43■□□□□ 0.22
DDX54-207ENST00000550016 NR4A2P43354 598 aa16.43■□□□□ 0.22
DDX54-207ENST00000550016 ACTC1P68032 377 aa16.43■□□□□ 0.22
DDX54-207ENST00000550016 ACTA1P68133 377 aa16.43■□□□□ 0.22
DDX54-207ENST00000550016 FAM3AP98173 230 aa16.43■□□□□ 0.22
DDX54-207ENST00000550016 ZNF85Q03923 595 aa16.43■□□□□ 0.22
DDX54-207ENST00000550016 RIN1Q13671 783 aa16.43■□□□□ 0.22
DDX54-207ENST00000550016 ZNF684Q5T5D7 378 aa16.43■□□□□ 0.22
DDX54-207ENST00000550016 PLEKHG7Q6ZR37 379 aa16.43■□□□□ 0.22
DDX54-207ENST00000550016 LURAP1LQ8IV03 231 aa16.43■□□□□ 0.22
DDX54-207ENST00000550016 YIPF7Q8N8F6 280 aa16.43■□□□□ 0.22
DDX54-207ENST00000550016 SLC22A4Q9H015 551 aa16.43■□□□□ 0.22
DDX54-207ENST00000550016 AMBNQ9NP70 447 aa16.43■□□□□ 0.22
DDX54-207ENST00000550016 IL19Q9UHD0 177 aa16.43■□□□□ 0.22
DDX54-207ENST00000550016 ZNF391Q9UJN7 358 aa16.43■□□□□ 0.22
DDX54-207ENST00000550016 HSPE1-MOB4S4R3N1 261 aa16.43■□□□□ 0.22
DDX54-207ENST00000550016 A0A0U1RQV5 110 aa16.42■□□□□ 0.22
DDX54-207ENST00000550016 DAPL1A0PJW8 107 aa16.42■□□□□ 0.22
DDX54-207ENST00000550016 CDC14BO60729 498 aa16.42■□□□□ 0.22
DDX54-207ENST00000550016 SRSF10O75494 262 aaKnown RBP16.42■□□□□ 0.22
DDX54-207ENST00000550016 RP2O75695 350 aa16.42■□□□□ 0.22
DDX54-207ENST00000550016 PNPP00491 289 aa16.42■□□□□ 0.22
DDX54-207ENST00000550016 GSK3AP49840 483 aa16.42■□□□□ 0.22
DDX54-207ENST00000550016 TMEM33P57088 247 aa16.42■□□□□ 0.22
DDX54-207ENST00000550016 ISL1P61371 349 aa16.42■□□□□ 0.22
DDX54-207ENST00000550016 GFOD2Q3B7J2 385 aa16.42■□□□□ 0.22
DDX54-207ENST00000550016 KLHL22Q53GT1 634 aa16.42■□□□□ 0.22
DDX54-207ENST00000550016 SPRNQ5BIV9 151 aa16.42■□□□□ 0.22
DDX54-207ENST00000550016 ACBD7Q8N6N7 88 aa16.42■□□□□ 0.22
DDX54-207ENST00000550016 OR56B2PQ8NGI1 322 aa16.42■□□□□ 0.22
DDX54-207ENST00000550016 PBOV1Q9GZY1 135 aa16.42■□□□□ 0.22
DDX54-207ENST00000550016 VCX3BQ9H321 246 aa16.42■□□□□ 0.22
DDX54-207ENST00000550016 ZNF275Q9NSD4 429 aaPredicted RBP16.42■□□□□ 0.22
DDX54-207ENST00000550016 MRPS18AQ9NVS2 196 aaKnown RBP16.42■□□□□ 0.22
DDX54-207ENST00000550016 NUFIP1Q9UHK0 495 aaKnown RBP16.42■□□□□ 0.22
DDX54-207ENST00000550016 NOP16Q9Y3C1 178 aaKnown RBP16.42■□□□□ 0.22
DDX54-207ENST00000550016 R4GMQ9 66 aa16.42■□□□□ 0.22
DDX54-207ENST00000550016 ZNF469Q96JG9 3925 aaPredicted RBP16.42■□□□□ 0.22
DDX54-207ENST00000550016 TEP1Q99973 2627 aaKnown RBP16.41■□□□□ 0.22
DDX54-207ENST00000550016 A0A096LNT2 108 aa16.41■□□□□ 0.22
DDX54-207ENST00000550016 hCG_38984A0A1B0GV85 526 aa16.41■□□□□ 0.22
DDX54-207ENST00000550016 LOC110117498-PIK3R3F6TDL0 507 aa16.41■□□□□ 0.22
DDX54-207ENST00000550016 H0YL77 283 aa16.41■□□□□ 0.22
DDX54-207ENST00000550016 MLNRO43193 412 aa16.41■□□□□ 0.22
DDX54-207ENST00000550016 FADS2O95864 444 aaKnown RBP16.41■□□□□ 0.22
DDX54-207ENST00000550016 TNFRSF1AP19438 455 aa16.41■□□□□ 0.22
DDX54-207ENST00000550016 CA6P23280 308 aa16.41■□□□□ 0.22
DDX54-207ENST00000550016 MFGE8Q08431 387 aaPredicted RBP16.41■□□□□ 0.22
DDX54-207ENST00000550016 RAB40BQ12829 278 aa16.41■□□□□ 0.22
DDX54-207ENST00000550016 SMN1Q16637 294 aaKnown RBP16.41■□□□□ 0.22
DDX54-207ENST00000550016 HFEQ30201 348 aa16.41■□□□□ 0.22
DDX54-207ENST00000550016 KCTD20Q7Z5Y7 419 aa16.41■□□□□ 0.22
DDX54-207ENST00000550016 C8orf59Q8N0T1 100 aaPredicted RBP16.41■□□□□ 0.22
DDX54-207ENST00000550016 OR10AD1Q8NGE0 317 aa16.41■□□□□ 0.22
DDX54-207ENST00000550016 CNIH3Q8TBE1 160 aa16.41■□□□□ 0.22
DDX54-207ENST00000550016 ITLN1Q8WWA0 313 aa16.41■□□□□ 0.22
DDX54-207ENST00000550016 TFAP2CQ92754 450 aa16.41■□□□□ 0.22
DDX54-207ENST00000550016 OR2V2Q96R30 315 aa16.41■□□□□ 0.22
DDX54-207ENST00000550016 SIGLEC11Q96RL6 698 aa16.41■□□□□ 0.22
DDX54-207ENST00000550016 BPESC1Q9GZL8 116 aa16.41■□□□□ 0.22
DDX54-207ENST00000550016 MRPL15Q9P015 296 aaKnown RBP16.41■□□□□ 0.22
DDX54-207ENST00000550016 SNX5Q9Y5X3 404 aa16.41■□□□□ 0.22
DDX54-207ENST00000550016 GMDSO60547 372 aa16.4■□□□□ 0.22
DDX54-207ENST00000550016 RPP14O95059 124 aaKnown RBP16.4■□□□□ 0.22
DDX54-207ENST00000550016 ATP6V1G2O95670 118 aa16.4■□□□□ 0.22
DDX54-207ENST00000550016 HLA-DPB1P04440 258 aa16.4■□□□□ 0.22
DDX54-207ENST00000550016 GNAO1P09471 354 aa16.4■□□□□ 0.22
DDX54-207ENST00000550016 USF1P22415 310 aaPredicted RBP16.4■□□□□ 0.22
DDX54-207ENST00000550016 SRP9P49458 86 aaKnown RBP16.4■□□□□ 0.22
DDX54-207ENST00000550016 LOXL1Q08397 574 aaPredicted RBP16.4■□□□□ 0.22
DDX54-207ENST00000550016 OR8G1Q15617 311 aa16.4■□□□□ 0.22
DDX54-207ENST00000550016 SNCBQ16143 134 aa16.4■□□□□ 0.22
DDX54-207ENST00000550016 LIPNQ5VXI9 398 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms