RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 RAP1BP61224 184 aa12.54□□□□□ -0.4
RAPGEF3-218ENST00000548919 RAP1AP62834 184 aa12.54□□□□□ -0.4
RAPGEF3-218ENST00000548919 GFOD2Q3B7J2 385 aa12.54□□□□□ -0.4
RAPGEF3-218ENST00000548919 SHEQ5VZ18 495 aa12.54□□□□□ -0.4
RAPGEF3-218ENST00000548919 H3F3CQ6NXT2 135 aa12.54□□□□□ -0.4
RAPGEF3-218ENST00000548919 FAHD2BQ6P2I3 314 aaPredicted RBP12.54□□□□□ -0.4
RAPGEF3-218ENST00000548919 KLHL24Q6TFL4 600 aa12.54□□□□□ -0.4
RAPGEF3-218ENST00000548919 H1FNTQ75WM6 255 aaPredicted RBP12.54□□□□□ -0.4
RAPGEF3-218ENST00000548919 OR10H5Q8NGA6 315 aa12.54□□□□□ -0.4
RAPGEF3-218ENST00000548919 OR5D14Q8NGL3 314 aa12.54□□□□□ -0.4
RAPGEF3-218ENST00000548919 STOML3Q8TAV4 291 aa12.54□□□□□ -0.4
RAPGEF3-218ENST00000548919 FAHD2AQ96GK7 314 aa12.54□□□□□ -0.4
RAPGEF3-218ENST00000548919 LPAR5Q9H1C0 372 aa12.54□□□□□ -0.4
RAPGEF3-218ENST00000548919 CD79AP11912 226 aa12.54□□□□□ -0.4
RAPGEF3-218ENST00000548919 FBLP22087 321 aaKnown RBP12.54□□□□□ -0.4
RAPGEF3-218ENST00000548919 CDAP32320 146 aa12.54□□□□□ -0.4
RAPGEF3-218ENST00000548919 DAP3P51398 398 aaKnown RBP12.54□□□□□ -0.4
RAPGEF3-218ENST00000548919 TERB2Q8NHR7 220 aa12.54□□□□□ -0.4
RAPGEF3-218ENST00000548919 SEC61A2Q9H9S3 476 aa12.54□□□□□ -0.4
RAPGEF3-218ENST00000548919 CTSFQ9UBX1 484 aa12.54□□□□□ -0.4
RAPGEF3-218ENST00000548919 LILRA5A6NI73 299 aa12.53□□□□□ -0.4
RAPGEF3-218ENST00000548919 ZNF705EA8MWA4 302 aaPredicted RBP12.53□□□□□ -0.4
RAPGEF3-218ENST00000548919 TMEM14DPA8MWL7 114 aa12.53□□□□□ -0.4
RAPGEF3-218ENST00000548919 HTR3BO95264 441 aa12.53□□□□□ -0.4
RAPGEF3-218ENST00000548919 PVALBP20472 110 aaPredicted RBP12.53□□□□□ -0.4
RAPGEF3-218ENST00000548919 OR1D5P58170 312 aa12.53□□□□□ -0.4
RAPGEF3-218ENST00000548919 FOXK1P85037 733 aa12.53□□□□□ -0.4
RAPGEF3-218ENST00000548919 DEGS2Q6QHC5 323 aa12.53□□□□□ -0.4
RAPGEF3-218ENST00000548919 CLEC18BQ6UXF7 455 aa12.53□□□□□ -0.4
RAPGEF3-218ENST00000548919 ZNF441Q8N8Z8 693 aa12.53□□□□□ -0.4
RAPGEF3-218ENST00000548919 DTWD2Q8NBA8 298 aa12.53□□□□□ -0.4
RAPGEF3-218ENST00000548919 SLC30A7Q8NEW0 376 aa12.53□□□□□ -0.4
RAPGEF3-218ENST00000548919 OR51F2Q8NH61 342 aa12.53□□□□□ -0.4
RAPGEF3-218ENST00000548919 MAFIPQ8WZ33 124 aa12.53□□□□□ -0.4
RAPGEF3-218ENST00000548919 UQCC2Q9BRT2 126 aa12.53□□□□□ -0.4
RAPGEF3-218ENST00000548919 HRH4Q9H3N8 390 aa12.53□□□□□ -0.4
RAPGEF3-218ENST00000548919 ZNF304Q9HCX3 659 aa12.53□□□□□ -0.4
RAPGEF3-218ENST00000548919 TMEM100Q9NV29 134 aa12.53□□□□□ -0.4
RAPGEF3-218ENST00000548919 NDRG3Q9UGV2 375 aa12.53□□□□□ -0.4
RAPGEF3-218ENST00000548919 CNTRLQ7Z7A1 2325 aa12.53□□□□□ -0.4
RAPGEF3-218ENST00000548919 SHISA7A6NL88 538 aa12.53□□□□□ -0.4
RAPGEF3-218ENST00000548919 SDCBPO00560 298 aaPredicted RBP12.53□□□□□ -0.4
RAPGEF3-218ENST00000548919 FOLR1P15328 257 aa12.53□□□□□ -0.4
RAPGEF3-218ENST00000548919 ZNF20P17024 532 aa12.53□□□□□ -0.4
RAPGEF3-218ENST00000548919 NFYBP25208 207 aa12.53□□□□□ -0.4
RAPGEF3-218ENST00000548919 ARL4DP49703 201 aa12.53□□□□□ -0.4
RAPGEF3-218ENST00000548919 MFAP5Q13361 173 aa12.53□□□□□ -0.4
RAPGEF3-218ENST00000548919 STK11Q15831 433 aa12.53□□□□□ -0.4
RAPGEF3-218ENST00000548919 ANKRD55Q3KP44 614 aa12.53□□□□□ -0.4
RAPGEF3-218ENST00000548919 TMEM128Q5BJH2 165 aa12.53□□□□□ -0.4
RAPGEF3-218ENST00000548919 ZNF585AQ6P3V2 769 aa12.53□□□□□ -0.4
RAPGEF3-218ENST00000548919 ABHD12BQ7Z5M8 362 aaPredicted RBP12.53□□□□□ -0.4
RAPGEF3-218ENST00000548919 RNF141Q8WVD5 230 aa12.53□□□□□ -0.4
RAPGEF3-218ENST00000548919 ARL11Q969Q4 196 aa12.53□□□□□ -0.4
RAPGEF3-218ENST00000548919 MRPL38Q96DV4 380 aaKnown RBP12.53□□□□□ -0.4
RAPGEF3-218ENST00000548919 RAB3CQ96E17 227 aa12.53□□□□□ -0.4
RAPGEF3-218ENST00000548919 NMES1Q9C002 83 aa12.53□□□□□ -0.4
RAPGEF3-218ENST00000548919 ZNF319Q9P2F9 582 aa12.53□□□□□ -0.4
RAPGEF3-218ENST00000548919 MRPS28Q9Y2Q9 187 aaKnown RBP12.53□□□□□ -0.4
RAPGEF3-218ENST00000548919 H2AFB1P0C5Y9 115 aa12.52□□□□□ -0.4
RAPGEF3-218ENST00000548919 FAM157CP0CG43 387 aa12.52□□□□□ -0.4
RAPGEF3-218ENST00000548919 MYF5P13349 255 aa12.52□□□□□ -0.4
RAPGEF3-218ENST00000548919 FOXRED2Q8IWF2 684 aa12.52□□□□□ -0.4
RAPGEF3-218ENST00000548919 FAM71F1Q96KD3 344 aaPredicted RBP12.52□□□□□ -0.4
RAPGEF3-218ENST00000548919 OR10C1Q96KK4 312 aa12.52□□□□□ -0.4
RAPGEF3-218ENST00000548919 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.52□□□□□ -0.4
RAPGEF3-218ENST00000548919 CHST11Q9NPF2 352 aa12.52□□□□□ -0.4
RAPGEF3-218ENST00000548919 TRBV6-7A0A0A0MS04 114 aa12.52□□□□□ -0.41
RAPGEF3-218ENST00000548919 FARS2O95363 451 aaKnown RBP12.52□□□□□ -0.41
RAPGEF3-218ENST00000548919 TMEM50BP56557 158 aa12.52□□□□□ -0.41
RAPGEF3-218ENST00000548919 SUPT4H1P63272 117 aaKnown RBP12.52□□□□□ -0.41
RAPGEF3-218ENST00000548919 FOXF1Q12946 379 aa12.52□□□□□ -0.41
RAPGEF3-218ENST00000548919 MST1LQ2TV78 715 aa12.52□□□□□ -0.41
RAPGEF3-218ENST00000548919 CARD17Q5XLA6 110 aa12.52□□□□□ -0.41
RAPGEF3-218ENST00000548919 GKN2Q86XP6 184 aa12.52□□□□□ -0.41
RAPGEF3-218ENST00000548919 ZDHHC12Q96GR4 267 aa12.52□□□□□ -0.41
RAPGEF3-218ENST00000548919 ARHGAP5-AS1Q96IT6 56 aa12.52□□□□□ -0.41
RAPGEF3-218ENST00000548919 CNTNAP3BQ96NU0 1288 aa12.52□□□□□ -0.41
RAPGEF3-218ENST00000548919 ST6GALNAC5Q9BVH7 336 aa12.52□□□□□ -0.41
RAPGEF3-218ENST00000548919 WBP1LQ9NX94 342 aa12.52□□□□□ -0.41
RAPGEF3-218ENST00000548919 POLR1DQ9Y2S0 133 aa12.52□□□□□ -0.41
RAPGEF3-218ENST00000548919 LHFPL6Q9Y693 200 aa12.52□□□□□ -0.41
RAPGEF3-218ENST00000548919 COL5A1P20908 1838 aaPredicted RBP12.52□□□□□ -0.41
RAPGEF3-218ENST00000548919 CX3CR1P49238 355 aa12.52□□□□□ -0.41
RAPGEF3-218ENST00000548919 PGAP1Q75T13 922 aa12.52□□□□□ -0.41
RAPGEF3-218ENST00000548919 OR5AS1Q8N127 324 aa12.52□□□□□ -0.41
RAPGEF3-218ENST00000548919 OR5D18Q8NGL1 313 aa12.52□□□□□ -0.41
RAPGEF3-218ENST00000548919 TMEM234Q8WY98 164 aa12.52□□□□□ -0.41
RAPGEF3-218ENST00000548919 C1orf147Q96MC9 270 aaPredicted RBP12.52□□□□□ -0.41
RAPGEF3-218ENST00000548919 GSKIPQ9P0R6 139 aa12.52□□□□□ -0.41
RAPGEF3-218ENST00000548919 GPR132Q9UNW8 380 aa12.52□□□□□ -0.41
RAPGEF3-218ENST00000548919 KLF2Q9Y5W3 355 aaPredicted RBP12.52□□□□□ -0.41
RAPGEF3-218ENST00000548919 ZNF98A6NK75 572 aa12.51□□□□□ -0.41
RAPGEF3-218ENST00000548919 RHPN2P1A8MT19 583 aa12.51□□□□□ -0.41
RAPGEF3-218ENST00000548919 EFNA2O43921 213 aa12.51□□□□□ -0.41
RAPGEF3-218ENST00000548919 CDC14BO60729 498 aa12.51□□□□□ -0.41
RAPGEF3-218ENST00000548919 NME1P15531 152 aaKnown RBP12.51□□□□□ -0.41
RAPGEF3-218ENST00000548919 HIST1H1DP16402 221 aaKnown RBP12.51□□□□□ -0.41
RAPGEF3-218ENST00000548919 TAS2R31P59538 309 aa12.51□□□□□ -0.41
RAPGEF3-218ENST00000548919 RNF4P78317 190 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms