RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 TRAF3IP2O43734 574 aaPredicted RBP2.74□□□□□ -1.97
PTCH1-216ENST00000548379 OR7A10O76100 309 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 C1orf105O95561 183 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 CCDC172P0C7W6 258 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 CHTF8P0CG12 524 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 F8A1P23610 371 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 FDFT1P37268 417 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 RBMXP38159 391 aaKnown RBP2.74□□□□□ -1.97
PTCH1-216ENST00000548379 SSR1P43307 286 aaKnown RBP2.74□□□□□ -1.97
PTCH1-216ENST00000548379 CRYBB2P43320 205 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 TAS2R19P59542 299 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 TGM3Q08188 693 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 ATP6AP1Q15904 470 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.74□□□□□ -1.97
PTCH1-216ENST00000548379 CARD17Q5XLA6 110 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 KCTD16Q68DU8 428 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 PPP1R2P3Q6NXS1 205 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 DNAJC24Q6P3W2 148 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 FAM92BQ6ZTR7 304 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 BIVMQ86UB2 503 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 TMEM135Q86UB9 458 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 PAQR7Q86WK9 346 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 RAB43Q86YS6 212 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 PNKDQ8N490 385 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 ATPAF2Q8N5M1 289 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 SUMF2Q8NBJ7 301 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 OR2L3Q8NG85 312 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 CT55Q8WUE5 264 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 GIMAP1Q8WWP7 306 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 ACOT11Q8WXI4 607 aaPredicted RBP2.74□□□□□ -1.97
PTCH1-216ENST00000548379 PEX13Q92968 403 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 UCN3Q969E3 161 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 MYDGFQ969H8 173 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 ECHDC3Q96DC8 303 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 FCRL1Q96LA6 429 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 IP6K3Q96PC2 410 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 ZIM3Q96PE6 472 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 MCEEQ96PE7 176 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 FMO2Q99518 471 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 C11orf70Q9BRQ4 267 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 TMEM246Q9BRR3 403 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 RIOK2Q9BVS4 552 aaKnown RBP2.74□□□□□ -1.97
PTCH1-216ENST00000548379 OR11A1Q9GZK7 315 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 DEFB127Q9H1M4 99 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 DHX35Q9H5Z1 703 aaKnown RBP2.74□□□□□ -1.97
PTCH1-216ENST00000548379 RNF167Q9H6Y7 350 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 RANBP3Q9H6Z4 567 aaPredicted RBP2.74□□□□□ -1.97
PTCH1-216ENST00000548379 UCK1Q9HA47 277 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 NT5MQ9NPB1 228 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 IL26Q9NPH9 171 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 RPRD1BQ9NQG5 326 aaKnown RBP2.74□□□□□ -1.97
PTCH1-216ENST00000548379 CD84Q9UIB8 345 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 RWDD2AQ9UIY3 292 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 CELA1Q9UNI1 258 aa2.74□□□□□ -1.97
PTCH1-216ENST00000548379 MUC22E2RYF6 1773 aaPredicted RBP2.74□□□□□ -1.97
PTCH1-216ENST00000548379 ANK1P16157 1881 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 PDCD11Q14690 1871 aaKnown RBP2.73□□□□□ -1.97
PTCH1-216ENST00000548379 MN1Q10571 1320 aaPredicted RBP2.73□□□□□ -1.97
PTCH1-216ENST00000548379 THADAQ6YHU6 1953 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 WI2-2373I1.2A0A1W2PRP0 233 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 SIGLEC16A6NMB1 481 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 F8VZ95 297 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 WRBO00258 174 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 KMOO15229 486 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 UPK3AO75631 287 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 SLC25A14O95258 325 aaPredicted RBP2.73□□□□□ -1.97
PTCH1-216ENST00000548379 KRT14P02533 472 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 UQCRHP07919 91 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 PNMA6AP0CW24 399 aaPredicted RBP2.73□□□□□ -1.97
PTCH1-216ENST00000548379 COX6B1P14854 86 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 UCHL3P15374 230 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 NELFEP18615 380 aaKnown RBP2.73□□□□□ -1.97
PTCH1-216ENST00000548379 CAPZBP47756 277 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 GSSP48637 474 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 CDH6P55285 790 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 GFERP55789 205 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 IFT88Q13099 833 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 ARFRP1Q13795 201 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 HADHQ16836 314 aaKnown RBP2.73□□□□□ -1.97
PTCH1-216ENST00000548379 CCDC122Q5T0U0 273 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 LRRC66Q68CR7 880 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 WDR59Q6PJI9 974 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 CLEC2AQ6UVW9 174 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 UTS2BQ765I0 119 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 ZNF571Q7Z3V5 609 aaPredicted RBP2.73□□□□□ -1.97
PTCH1-216ENST00000548379 ZNF546Q86UE3 836 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 OOSP2Q86WS3 158 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 ST6GALNAC3Q8NDV1 305 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 SDR9C7Q8NEX9 313 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 SPATA4Q8NEY3 305 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 FDCSPQ8NFU4 85 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 OR1L6Q8NGR2 347 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 OR9G1Q8NH87 305 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 JOSD2Q8TAC2 188 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 SLC22A8Q8TCC7 542 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 PYROXD1Q8WU10 500 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 ARPC1AQ92747 370 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 ZNF514Q96K75 400 aaPredicted RBP2.73□□□□□ -1.97
PTCH1-216ENST00000548379 PANX2Q96RD6 677 aa2.73□□□□□ -1.97
PTCH1-216ENST00000548379 BCL7BQ9BQE9 202 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms