RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 FAHD1Q6P587 224 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 FAM220AQ7Z4H9 259 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 HSD17B13Q7Z5P4 300 aaPredicted RBP3.22□□□□□ -1.89
SCAF11-210ENST00000547654 SETD3Q86TU7 594 aaPredicted RBP3.22□□□□□ -1.89
SCAF11-210ENST00000547654 Q8N377 158 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 ZADH2Q8N4Q0 377 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 CBR4Q8N4T8 237 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 MREGQ8N565 214 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 OR4F15Q8NGB8 312 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 OR1N2Q8NGR9 330 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 RASL10AQ92737 203 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 ARPC1AQ92747 370 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 IL22RA2Q969J5 263 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 RCN3Q96D15 328 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 FAM122AQ96E09 287 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 DYNLL2Q96FJ2 89 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 LINC00479Q96M42 142 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 SERPINB11Q96P15 392 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 RANBP9Q96S59 729 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 CIB1Q99828 191 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 CTRCQ99895 268 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 APOL2Q9BQE5 337 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 TIMM29Q9BSF4 260 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 C19orf24Q9BVV8 132 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 ANGPTL4Q9BY76 406 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 SRRQ9GZT4 340 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 DRC3Q9H069 523 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 ZDHHC11Q9H8X9 412 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 SLC25A22Q9H936 323 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 ABCB10Q9NRK6 738 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 AIG1Q9NVV5 245 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 RBAKQ9NYW8 714 aaPredicted RBP3.22□□□□□ -1.89
SCAF11-210ENST00000547654 XCL2Q9UBD3 114 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 APOBEC3BQ9UH17 382 aaKnown RBP3.22□□□□□ -1.89
SCAF11-210ENST00000547654 PSMD13Q9UNM6 376 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 FADS3Q9Y5Q0 445 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 URGCP-MRPS24S4R325 110 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 ABCC6O95255 1503 aa3.22□□□□□ -1.89
SCAF11-210ENST00000547654 GAKO14976 1311 aa3.21□□□□□ -1.89
SCAF11-210ENST00000547654 SCN4AP35499 1836 aa3.21□□□□□ -1.89
SCAF11-210ENST00000547654 CACNA1BQ00975 2339 aa3.21□□□□□ -1.89
SCAF11-210ENST00000547654 CFAP54Q96N23 3096 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 CDH23Q9H251 3354 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 TRAV8-7A0A075B6U6 113 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 TRAV39A0A0B4J263 110 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 TVP23AA6NH52 213 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 NME4O00746 187 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 TNFSF11O14788 317 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 RAD51BO15315 384 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 SNAI2O43623 268 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 TRAPPC6AO75865 159 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 CSF3P09919 207 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 ZP3P21754 424 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 GDF1P27539 372 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 SHC1P29353 583 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 P2RY2P41231 377 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 RBM34P42696 430 aaKnown RBP3.21□□□□□ -1.9
SCAF11-210ENST00000547654 BLVRAP53004 296 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 OR2B6P58173 313 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 MXD1Q05195 221 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 ZNF763Q0D2J5 394 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 PIGHQ14442 188 aaPredicted RBP3.21□□□□□ -1.9
SCAF11-210ENST00000547654 OR4D1Q15615 310 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 LCE3EQ5T5B0 92 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 CPTPQ5TA50 214 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 THOC7Q6I9Y2 204 aaKnown RBP3.21□□□□□ -1.9
SCAF11-210ENST00000547654 SPINK14Q6IE38 97 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 FAAP20Q6NZ36 180 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 PLEKHG7Q6ZR37 379 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 P2RY8Q86VZ1 359 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 CBLN2Q8IUK8 224 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 CYB561A3Q8NBI2 242 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 OR2AP1Q8NGE2 309 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 GEMIN6Q8WXD5 167 aaKnown RBP3.21□□□□□ -1.9
SCAF11-210ENST00000547654 IFT81Q8WYA0 676 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 C8orf76Q96K31 380 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 B3GALT6Q96L58 329 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 ZFP3Q96NJ6 502 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 ZNF184Q99676 751 aaPredicted RBP3.21□□□□□ -1.9
SCAF11-210ENST00000547654 KIR2DL4Q99706 377 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 C7orf50Q9BRJ6 194 aaKnown RBP3.21□□□□□ -1.9
SCAF11-210ENST00000547654 SAV1Q9H4B6 383 aaPredicted RBP3.21□□□□□ -1.9
SCAF11-210ENST00000547654 C6orf50Q9HD87 102 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 RMND1Q9NWS8 449 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 SDHAF2Q9NX18 166 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 CLEC5AQ9NY25 188 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 CBY1Q9Y3M2 126 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 TSSC4Q9Y5U2 329 aaPredicted RBP3.21□□□□□ -1.9
SCAF11-210ENST00000547654 KCNE3Q9Y6H6 103 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 KMT2BQ9UMN6 2715 aaPredicted RBP3.21□□□□□ -1.9
SCAF11-210ENST00000547654 COL5A2P05997 1499 aaPredicted RBP3.21□□□□□ -1.9
SCAF11-210ENST00000547654 AKAP11Q9UKA4 1901 aa3.21□□□□□ -1.9
SCAF11-210ENST00000547654 MAPK8IP3Q9UPT6 1336 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 KIAA0100Q14667 2235 aaKnown RBP3.2□□□□□ -1.9
SCAF11-210ENST00000547654 C5orf42Q9H799 3197 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 IGKV1D-13A0A0B4J2D9 117 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 NCBP2LA6PVI3 153 aaKnown RBP3.2□□□□□ -1.9
SCAF11-210ENST00000547654 HIDE1A8MVS5 230 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 RSPH10B2B2RC85 870 aa3.2□□□□□ -1.9
SCAF11-210ENST00000547654 ANKRD65E5RJM6 399 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms