RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 AMBNQ9NP70 447 aa14.3□□□□□ -0.12
CCDC38-203ENST00000546803 DLL4Q9NR61 685 aa14.3□□□□□ -0.12
CCDC38-203ENST00000546803 INPP5EQ9NRR6 644 aa14.3□□□□□ -0.12
CCDC38-203ENST00000546803 TMEM100Q9NV29 134 aa14.3□□□□□ -0.12
CCDC38-203ENST00000546803 ZNF319Q9P2F9 582 aa14.3□□□□□ -0.12
CCDC38-203ENST00000546803 NUFIP1Q9UHK0 495 aaKnown RBP14.3□□□□□ -0.12
CCDC38-203ENST00000546803 R4GMQ9 66 aa14.3□□□□□ -0.12
CCDC38-203ENST00000546803 MAST4O15021 2626 aa14.3□□□□□ -0.12
CCDC38-203ENST00000546803 IGHV4-30-2A0A087WSY4 118 aa14.29□□□□□ -0.12
CCDC38-203ENST00000546803 A0A0U1RQV5 110 aa14.29□□□□□ -0.12
CCDC38-203ENST00000546803 IRGMA1A4Y4 181 aa14.29□□□□□ -0.12
CCDC38-203ENST00000546803 LOC110117498-PIK3R3F6TDL0 507 aa14.29□□□□□ -0.12
CCDC38-203ENST00000546803 FOSL1P15407 271 aa14.29□□□□□ -0.12
CCDC38-203ENST00000546803 ACHEP22303 614 aa14.29□□□□□ -0.12
CCDC38-203ENST00000546803 AQP4P55087 323 aa14.29□□□□□ -0.12
CCDC38-203ENST00000546803 FAM3AP98173 230 aa14.29□□□□□ -0.12
CCDC38-203ENST00000546803 ZNF85Q03923 595 aa14.29□□□□□ -0.12
CCDC38-203ENST00000546803 SNCBQ16143 134 aa14.29□□□□□ -0.12
CCDC38-203ENST00000546803 CARTPTQ16568 116 aa14.29□□□□□ -0.12
CCDC38-203ENST00000546803 FAM220AQ7Z4H9 259 aa14.29□□□□□ -0.12
CCDC38-203ENST00000546803 YIPF7Q8N8F6 280 aa14.29□□□□□ -0.12
CCDC38-203ENST00000546803 BHLHE23Q8NDY6 225 aa14.29□□□□□ -0.12
CCDC38-203ENST00000546803 OR8B12Q8NGG6 310 aa14.29□□□□□ -0.12
CCDC38-203ENST00000546803 CNIH3Q8TBE1 160 aa14.29□□□□□ -0.12
CCDC38-203ENST00000546803 PIMREGQ9BSJ6 248 aa14.29□□□□□ -0.12
CCDC38-203ENST00000546803 PBOV1Q9GZY1 135 aa14.29□□□□□ -0.12
CCDC38-203ENST00000546803 CHODLQ9H9P2 273 aa14.29□□□□□ -0.12
CCDC38-203ENST00000546803 MRPL15Q9P015 296 aaKnown RBP14.29□□□□□ -0.12
CCDC38-203ENST00000546803 IL19Q9UHD0 177 aa14.29□□□□□ -0.12
CCDC38-203ENST00000546803 RRP15Q9Y3B9 282 aaKnown RBP14.29□□□□□ -0.12
CCDC38-203ENST00000546803 LRBAP50851 2863 aa14.28□□□□□ -0.12
CCDC38-203ENST00000546803 hCG_38984A0A1B0GV85 526 aa14.28□□□□□ -0.12
CCDC38-203ENST00000546803 H7C1Q1 480 aa14.28□□□□□ -0.12
CCDC38-203ENST00000546803 MAGEB4O15481 346 aaPredicted RBP14.28□□□□□ -0.12
CCDC38-203ENST00000546803 SRSF10O75494 262 aaKnown RBP14.28□□□□□ -0.12
CCDC38-203ENST00000546803 GNAO1P09471 354 aa14.28□□□□□ -0.12
CCDC38-203ENST00000546803 TACSTD2P09758 323 aa14.28□□□□□ -0.12
CCDC38-203ENST00000546803 TNFRSF1AP19438 455 aa14.28□□□□□ -0.12
CCDC38-203ENST00000546803 GIFP27352 417 aa14.28□□□□□ -0.12
CCDC38-203ENST00000546803 CRYBB2P43320 205 aa14.28□□□□□ -0.12
CCDC38-203ENST00000546803 PRSS12P56730 875 aa14.28□□□□□ -0.12
CCDC38-203ENST00000546803 TMEM33P57088 247 aa14.28□□□□□ -0.12
CCDC38-203ENST00000546803 SMN1Q16637 294 aaKnown RBP14.28□□□□□ -0.12
CCDC38-203ENST00000546803 LIPNQ5VXI9 398 aa14.28□□□□□ -0.12
CCDC38-203ENST00000546803 THAP5Q7Z6K1 395 aa14.28□□□□□ -0.12
CCDC38-203ENST00000546803 KLBQ86Z14 1044 aa14.28□□□□□ -0.12
CCDC38-203ENST00000546803 CSNK2A3Q8NEV1 391 aa14.28□□□□□ -0.12
CCDC38-203ENST00000546803 OR56B2PQ8NGI1 322 aa14.28□□□□□ -0.12
CCDC38-203ENST00000546803 SIGLEC11Q96RL6 698 aa14.28□□□□□ -0.12
CCDC38-203ENST00000546803 TEX15Q9BXT5 2789 aa14.28□□□□□ -0.12
CCDC38-203ENST00000546803 REG4Q9BYZ8 158 aa14.28□□□□□ -0.12
CCDC38-203ENST00000546803 SNX5Q9Y5X3 404 aa14.28□□□□□ -0.12
CCDC38-203ENST00000546803 MYO9AB2RTY4 2548 aa14.28□□□□□ -0.12
CCDC38-203ENST00000546803 ARID1AO14497 2285 aa14.27□□□□□ -0.12
CCDC38-203ENST00000546803 CSMD1Q96PZ7 3565 aa14.27□□□□□ -0.12
CCDC38-203ENST00000546803 IGHV1-69-2A0A0G2JMI3 117 aa14.27□□□□□ -0.13
CCDC38-203ENST00000546803 RRP9O43818 475 aaKnown RBP14.27□□□□□ -0.13
CCDC38-203ENST00000546803 LILRA1O75019 489 aa14.27□□□□□ -0.13
CCDC38-203ENST00000546803 PNPP00491 289 aa14.27□□□□□ -0.13
CCDC38-203ENST00000546803 IGHA1P01876 353 aa14.27□□□□□ -0.13
CCDC38-203ENST00000546803 ATP6V1B1P15313 513 aa14.27□□□□□ -0.13
CCDC38-203ENST00000546803 COL8A2P25067 703 aa14.27□□□□□ -0.13
CCDC38-203ENST00000546803 HSPA13P48723 471 aa14.27□□□□□ -0.13
CCDC38-203ENST00000546803 SRP9P49458 86 aaKnown RBP14.27□□□□□ -0.13
CCDC38-203ENST00000546803 GSK3AP49840 483 aa14.27□□□□□ -0.13
CCDC38-203ENST00000546803 ACTA2P62736 377 aa14.27□□□□□ -0.13
CCDC38-203ENST00000546803 ACTG2P63267 376 aa14.27□□□□□ -0.13
CCDC38-203ENST00000546803 MFGE8Q08431 387 aaPredicted RBP14.27□□□□□ -0.13
CCDC38-203ENST00000546803 GALEQ14376 348 aa14.27□□□□□ -0.13
CCDC38-203ENST00000546803 OR8B8Q15620 311 aa14.27□□□□□ -0.13
CCDC38-203ENST00000546803 GFOD2Q3B7J2 385 aa14.27□□□□□ -0.13
CCDC38-203ENST00000546803 CDONQ4KMG0 1287 aa14.27□□□□□ -0.13
CCDC38-203ENST00000546803 ELMOD2Q8IZ81 293 aa14.27□□□□□ -0.13
CCDC38-203ENST00000546803 FTMTQ8N4E7 242 aa14.27□□□□□ -0.13
CCDC38-203ENST00000546803 OR52I1Q8NGK6 324 aa14.27□□□□□ -0.13
CCDC38-203ENST00000546803 FBLIM1Q8WUP2 373 aa14.27□□□□□ -0.13
CCDC38-203ENST00000546803 C18orf12Q96KH6 178 aa14.27□□□□□ -0.13
CCDC38-203ENST00000546803 COX4I2Q96KJ9 171 aa14.27□□□□□ -0.13
CCDC38-203ENST00000546803 FGF20Q9NP95 211 aaPredicted RBP14.27□□□□□ -0.13
CCDC38-203ENST00000546803 OR52A1Q9UKL2 312 aa14.27□□□□□ -0.13
CCDC38-203ENST00000546803 ARFGEF3Q5TH69 2177 aa14.27□□□□□ -0.13
CCDC38-203ENST00000546803 ANKRD30BLA7E2S9 258 aa14.26□□□□□ -0.13
CCDC38-203ENST00000546803 VWC2LB2RUY7 222 aa14.26□□□□□ -0.13
CCDC38-203ENST00000546803 RNF223E7ERA6 249 aa14.26□□□□□ -0.13
CCDC38-203ENST00000546803 LYNX1G3V0Z9 82 aa14.26□□□□□ -0.13
CCDC38-203ENST00000546803 GMDSO60547 372 aa14.26□□□□□ -0.13
CCDC38-203ENST00000546803 FAM20BO75063 409 aa14.26□□□□□ -0.13
CCDC38-203ENST00000546803 RP2O75695 350 aa14.26□□□□□ -0.13
CCDC38-203ENST00000546803 RPP14O95059 124 aaKnown RBP14.26□□□□□ -0.13
CCDC38-203ENST00000546803 IGLV3-1P01715 115 aa14.26□□□□□ -0.13
CCDC38-203ENST00000546803 LYNX1P0DP58 116 aa14.26□□□□□ -0.13
CCDC38-203ENST00000546803 DCKP27707 260 aa14.26□□□□□ -0.13
CCDC38-203ENST00000546803 NR4A2P43354 598 aa14.26□□□□□ -0.13
CCDC38-203ENST00000546803 RIN1Q13671 783 aa14.26□□□□□ -0.13
CCDC38-203ENST00000546803 HFEQ30201 348 aa14.26□□□□□ -0.13
CCDC38-203ENST00000546803 TP53I3Q53FA7 332 aa14.26□□□□□ -0.13
CCDC38-203ENST00000546803 C6orf52Q5T4I8 152 aa14.26□□□□□ -0.13
CCDC38-203ENST00000546803 BCL2L15Q5TBC7 163 aa14.26□□□□□ -0.13
CCDC38-203ENST00000546803 CELF2-AS1Q8N7Q2 184 aa14.26□□□□□ -0.13
CCDC38-203ENST00000546803 SPERTQ8NA61 448 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms