RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 MGAT4DA6NG13 374 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 PDZK1P1A8MUH7 402 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 BET1O15155 118 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 TPST2O60704 377 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 POP7O75817 140 aaKnown RBP2.21□□□□□ -2.06
SNHG1-224ENST00000545688 OR2B3O76000 313 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 CDK14O94921 469 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 LSM8O95777 96 aaKnown RBP2.21□□□□□ -2.06
SNHG1-224ENST00000545688 ABOP16442 354 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 CMA1P23946 247 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 SDC4P31431 198 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 LEPP41159 167 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 MAXP61244 160 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 SNTB2Q13425 540 aaKnown RBP2.21□□□□□ -2.06
SNHG1-224ENST00000545688 KIR2DS1Q14954 304 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 STK38Q15208 465 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 RSPO1Q2MKA7 263 aaPredicted RBP2.21□□□□□ -2.06
SNHG1-224ENST00000545688 NSUN5P1Q3KNT7 163 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 LINC01620Q4KN68 170 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 BOLA3Q53S33 107 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 ARMC12Q5T9G4 340 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 ATL3Q6DD88 541 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 FRMPD2BQ6IN97 320 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 SLC25A25Q6KCM7 469 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 WDR59Q6PJI9 974 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 PRSS41Q7RTY9 318 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 PCP2Q8IVA1 136 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 CPAMD8Q8IZJ3 1885 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 Q8N976 141 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 ZFP62Q8NB50 900 aaPredicted RBP2.21□□□□□ -2.06
SNHG1-224ENST00000545688 TMEM35BQ8NCS4 154 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 OR4E2Q8NGC2 313 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 OR9G1Q8NH87 305 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 FAM172AQ8WUF8 416 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 RAPGEF5Q92565 580 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 TMEM186Q96B77 213 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 C8orf44Q96CB5 159 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 RMI2Q96E14 147 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 SECISBP2Q96T21 854 aaKnown RBP2.21□□□□□ -2.06
SNHG1-224ENST00000545688 ATP6V0BQ99437 205 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 ZSCAN5AQ9BUG6 496 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 ROGDIQ9GZN7 287 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 FANCEQ9HB96 536 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 CCL28Q9NRJ3 127 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 SMOXQ9NWM0 555 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 SOHLH2Q9NX45 425 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 EURLQ9NYK6 297 aa2.21□□□□□ -2.06
SNHG1-224ENST00000545688 HERC2O95714 4834 aa2.2□□□□□ -2.06
SNHG1-224ENST00000545688 A0A096LNT2 108 aa2.2□□□□□ -2.06
SNHG1-224ENST00000545688 A0A1B0GVL5 298 aa2.2□□□□□ -2.06
SNHG1-224ENST00000545688 GSAPA4D1B5 854 aa2.2□□□□□ -2.06
SNHG1-224ENST00000545688 SIGLEC16A6NMB1 481 aa2.2□□□□□ -2.06
SNHG1-224ENST00000545688 E7ESA3 106 aa2.2□□□□□ -2.06
SNHG1-224ENST00000545688 CD5LO43866 347 aa2.2□□□□□ -2.06
SNHG1-224ENST00000545688 MTX2O75431 263 aa2.2□□□□□ -2.06
SNHG1-224ENST00000545688 SLC25A14O95258 325 aaPredicted RBP2.2□□□□□ -2.06
SNHG1-224ENST00000545688 IGKV4-1P06312 121 aa2.2□□□□□ -2.06
SNHG1-224ENST00000545688 RNASE2P10153 161 aaKnown RBP2.2□□□□□ -2.06
SNHG1-224ENST00000545688 MUC1P15941 1255 aaPredicted RBP2.2□□□□□ -2.06
SNHG1-224ENST00000545688 HLA-DPA1P20036 260 aa2.2□□□□□ -2.06
SNHG1-224ENST00000545688 PAICSP22234 425 aaKnown RBP2.2□□□□□ -2.06
SNHG1-224ENST00000545688 LOXP28300 417 aaPredicted RBP2.2□□□□□ -2.06
SNHG1-224ENST00000545688 PEBP1P30086 187 aaKnown RBP2.2□□□□□ -2.06
SNHG1-224ENST00000545688 CD86P42081 329 aa2.2□□□□□ -2.06
SNHG1-224ENST00000545688 CXCL5P42830 114 aa2.2□□□□□ -2.06
SNHG1-224ENST00000545688 CD151P48509 253 aa2.2□□□□□ -2.06
SNHG1-224ENST00000545688 TPI1P60174 286 aa2.2□□□□□ -2.06
SNHG1-224ENST00000545688 OGDHQ02218 1023 aa2.2□□□□□ -2.06
SNHG1-224ENST00000545688 BCL7AQ4VC05 210 aa2.2□□□□□ -2.06
SNHG1-224ENST00000545688 RIPPLY2Q5TAB7 128 aa2.2□□□□□ -2.06
SNHG1-224ENST00000545688 TMEM220Q6QAJ8 160 aa2.2□□□□□ -2.06
SNHG1-224ENST00000545688 SPESP1Q6UW49 350 aa2.2□□□□□ -2.06
SNHG1-224ENST00000545688 SHISA6Q6ZSJ9 500 aa2.2□□□□□ -2.06
SNHG1-224ENST00000545688 LHFPL4Q7Z7J7 247 aa2.2□□□□□ -2.06
SNHG1-224ENST00000545688 PSTKQ8IV42 348 aaKnown RBP2.2□□□□□ -2.06
SNHG1-224ENST00000545688 OR10G3Q8NGC4 313 aa2.2□□□□□ -2.06
SNHG1-224ENST00000545688 CCDC110Q8TBZ0 833 aa2.2□□□□□ -2.06
SNHG1-224ENST00000545688 TCTEX1D2Q8WW35 142 aa2.2□□□□□ -2.06
SNHG1-224ENST00000545688 ST8SIA1Q92185 356 aa2.2□□□□□ -2.06
SNHG1-224ENST00000545688 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.2□□□□□ -2.06
SNHG1-224ENST00000545688 FCRL1Q96LA6 429 aa2.2□□□□□ -2.06
SNHG1-224ENST00000545688 C20orf85Q9H1P6 137 aa2.2□□□□□ -2.06
SNHG1-224ENST00000545688 OR52A5Q9H2C5 316 aa2.2□□□□□ -2.06
SNHG1-224ENST00000545688 SRMSQ9H3Y6 488 aa2.2□□□□□ -2.06
SNHG1-224ENST00000545688 IL26Q9NPH9 171 aa2.2□□□□□ -2.06
SNHG1-224ENST00000545688 SIRT7Q9NRC8 400 aa2.2□□□□□ -2.06
SNHG1-224ENST00000545688 ETNK2Q9NVF9 386 aa2.2□□□□□ -2.06
SNHG1-224ENST00000545688 C3orf18Q9UK00 162 aa2.2□□□□□ -2.06
SNHG1-224ENST00000545688 PSMD13Q9UNM6 376 aa2.2□□□□□ -2.06
SNHG1-224ENST00000545688 FREM1Q5H8C1 2179 aa2.2□□□□□ -2.06
SNHG1-224ENST00000545688 VWFP04275 2813 aa2.2□□□□□ -2.06
SNHG1-224ENST00000545688 DNAH9Q9NYC9 4486 aa2.2□□□□□ -2.06
SNHG1-224ENST00000545688 DYNC2H1Q8NCM8 4307 aaKnown RBP2.2□□□□□ -2.06
SNHG1-224ENST00000545688 DNAH1Q9P2D7 4330 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 NSG1A0A0A6YYJ2 146 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 C1orf232A0A0U1RR37 186 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 FAM170AA1A519 330 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 DEFB108AA8MXU0 73 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 C2orf74A8MZ97 194 aa2.19□□□□□ -2.06
SNHG1-224ENST00000545688 RASGRF2O14827 1237 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms