RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 PCGF3Q3KNV8 242 aa12.83□□□□□ -0.36
CD9-210ENST00000543916 CDONQ4KMG0 1287 aa12.83□□□□□ -0.36
CD9-210ENST00000543916 KLHL22Q53GT1 634 aa12.83□□□□□ -0.36
CD9-210ENST00000543916 SPRNQ5BIV9 151 aa12.83□□□□□ -0.36
CD9-210ENST00000543916 ZMAT1Q5H9K5 638 aa12.83□□□□□ -0.36
CD9-210ENST00000543916 LIPNQ5VXI9 398 aa12.83□□□□□ -0.36
CD9-210ENST00000543916 THAP5Q7Z6K1 395 aa12.83□□□□□ -0.36
CD9-210ENST00000543916 LHFPL3Q86UP9 236 aa12.83□□□□□ -0.36
CD9-210ENST00000543916 TGIF2LYQ8IUE0 185 aa12.83□□□□□ -0.36
CD9-210ENST00000543916 OR2Z1Q8NG97 314 aa12.83□□□□□ -0.36
CD9-210ENST00000543916 OR56B2PQ8NGI1 322 aa12.83□□□□□ -0.36
CD9-210ENST00000543916 RNF166Q96A37 237 aaPredicted RBP12.83□□□□□ -0.36
CD9-210ENST00000543916 SIGLEC11Q96RL6 698 aa12.83□□□□□ -0.36
CD9-210ENST00000543916 SLC30A2Q9BRI3 323 aa12.83□□□□□ -0.36
CD9-210ENST00000543916 ZNF649Q9BS31 505 aa12.83□□□□□ -0.36
CD9-210ENST00000543916 SOX7Q9BT81 388 aa12.83□□□□□ -0.36
CD9-210ENST00000543916 PBOV1Q9GZY1 135 aa12.83□□□□□ -0.36
CD9-210ENST00000543916 FGF20Q9NP95 211 aaPredicted RBP12.83□□□□□ -0.36
CD9-210ENST00000543916 G6PC2Q9NQR9 355 aa12.83□□□□□ -0.36
CD9-210ENST00000543916 ACOXLQ9NUZ1 547 aa12.83□□□□□ -0.36
CD9-210ENST00000543916 NUFIP1Q9UHK0 495 aaKnown RBP12.83□□□□□ -0.36
CD9-210ENST00000543916 GNG8Q9UK08 70 aa12.83□□□□□ -0.36
CD9-210ENST00000543916 ZDHHC8Q9ULC8 765 aa12.83□□□□□ -0.36
CD9-210ENST00000543916 GTF2A1LQ9UNN4 478 aa12.83□□□□□ -0.36
CD9-210ENST00000543916 R4GMQ9 66 aa12.83□□□□□ -0.36
CD9-210ENST00000543916 ARID1AO14497 2285 aa12.83□□□□□ -0.36
CD9-210ENST00000543916 IGHV4-30-2A0A087WSY4 118 aa12.82□□□□□ -0.36
CD9-210ENST00000543916 A0A1B0GWJ7 208 aa12.82□□□□□ -0.36
CD9-210ENST00000543916 TRIM64A6NGJ6 449 aa12.82□□□□□ -0.36
CD9-210ENST00000543916 TRIM64BA6NI03 449 aa12.82□□□□□ -0.36
CD9-210ENST00000543916 XPNPEP2O43895 674 aa12.82□□□□□ -0.36
CD9-210ENST00000543916 FAM20BO75063 409 aa12.82□□□□□ -0.36
CD9-210ENST00000543916 TTRP02766 147 aa12.82□□□□□ -0.36
CD9-210ENST00000543916 CD55P08174 381 aa12.82□□□□□ -0.36
CD9-210ENST00000543916 GSK3AP49840 483 aa12.82□□□□□ -0.36
CD9-210ENST00000543916 OR12D2P58182 307 aa12.82□□□□□ -0.36
CD9-210ENST00000543916 GALEQ14376 348 aa12.82□□□□□ -0.36
CD9-210ENST00000543916 FAM209AQ5JX71 171 aa12.82□□□□□ -0.36
CD9-210ENST00000543916 CLEC2AQ6UVW9 174 aa12.82□□□□□ -0.36
CD9-210ENST00000543916 OR10AD1Q8NGE0 317 aa12.82□□□□□ -0.36
CD9-210ENST00000543916 UBASH3BQ8TF42 649 aa12.82□□□□□ -0.36
CD9-210ENST00000543916 RORBQ92753 470 aa12.82□□□□□ -0.36
CD9-210ENST00000543916 YIPF5Q969M3 257 aa12.82□□□□□ -0.36
CD9-210ENST00000543916 ELMOD3Q96FG2 381 aa12.82□□□□□ -0.36
CD9-210ENST00000543916 DIRC2Q96SL1 478 aa12.82□□□□□ -0.36
CD9-210ENST00000543916 ANKRD60Q9BZ19 345 aa12.82□□□□□ -0.36
CD9-210ENST00000543916 RGCCQ9H4X1 137 aa12.82□□□□□ -0.36
CD9-210ENST00000543916 ERVK13-1Q9NX77 482 aa12.82□□□□□ -0.36
CD9-210ENST00000543916 OR52A1Q9UKL2 312 aa12.82□□□□□ -0.36
CD9-210ENST00000543916 SLC22A13Q9Y226 551 aa12.82□□□□□ -0.36
CD9-210ENST00000543916 A0A0U1RQV5 110 aa12.81□□□□□ -0.36
CD9-210ENST00000543916 TPD52L2O43399 206 aaKnown RBP12.81□□□□□ -0.36
CD9-210ENST00000543916 IGLV3-1P01715 115 aa12.81□□□□□ -0.36
CD9-210ENST00000543916 HLA-DPB1P04440 258 aa12.81□□□□□ -0.36
CD9-210ENST00000543916 LIMS3P0CW19 117 aa12.81□□□□□ -0.36
CD9-210ENST00000543916 LIMS4P0CW20 117 aa12.81□□□□□ -0.36
CD9-210ENST00000543916 MYF6P23409 242 aa12.81□□□□□ -0.36
CD9-210ENST00000543916 CFL1P23528 166 aaKnown RBP12.81□□□□□ -0.36
CD9-210ENST00000543916 COL8A2P25067 703 aa12.81□□□□□ -0.36
CD9-210ENST00000543916 PSMB10P40306 273 aa12.81□□□□□ -0.36
CD9-210ENST00000543916 HSPA13P48723 471 aa12.81□□□□□ -0.36
CD9-210ENST00000543916 TNFAIP6P98066 277 aaPredicted RBP12.81□□□□□ -0.36
CD9-210ENST00000543916 HNRNPA0Q13151 305 aaKnown RBP12.81□□□□□ -0.36
CD9-210ENST00000543916 OR8B8Q15620 311 aa12.81□□□□□ -0.36
CD9-210ENST00000543916 CARTPTQ16568 116 aa12.81□□□□□ -0.36
CD9-210ENST00000543916 BCL2L15Q5TBC7 163 aa12.81□□□□□ -0.36
CD9-210ENST00000543916 FAM220AQ7Z4H9 259 aa12.81□□□□□ -0.36
CD9-210ENST00000543916 CATSPERDQ86XM0 798 aa12.81□□□□□ -0.36
CD9-210ENST00000543916 ZNF786Q8N393 782 aa12.81□□□□□ -0.36
CD9-210ENST00000543916 OR13G1Q8NGZ3 307 aa12.81□□□□□ -0.36
CD9-210ENST00000543916 OR51E1Q8TCB6 317 aa12.81□□□□□ -0.36
CD9-210ENST00000543916 C10orf105Q8TEF2 133 aa12.81□□□□□ -0.36
CD9-210ENST00000543916 SPRYD4Q8WW59 207 aaPredicted RBP12.81□□□□□ -0.36
CD9-210ENST00000543916 FAM168AQ92567 244 aa12.81□□□□□ -0.36
CD9-210ENST00000543916 GGHQ92820 318 aa12.81□□□□□ -0.36
CD9-210ENST00000543916 C4orf36Q96KX1 117 aa12.81□□□□□ -0.36
CD9-210ENST00000543916 ALG8Q9BVK2 526 aa12.81□□□□□ -0.36
CD9-210ENST00000543916 JAM3Q9BX67 310 aa12.81□□□□□ -0.36
CD9-210ENST00000543916 MOB1AQ9H8S9 216 aa12.81□□□□□ -0.36
CD9-210ENST00000543916 SAP30LQ9HAJ7 183 aa12.81□□□□□ -0.36
CD9-210ENST00000543916 INPP5EQ9NRR6 644 aa12.81□□□□□ -0.36
CD9-210ENST00000543916 DECR2Q9NUI1 292 aa12.81□□□□□ -0.36
CD9-210ENST00000543916 PLCXD1Q9NUJ7 323 aa12.81□□□□□ -0.36
CD9-210ENST00000543916 SNX5Q9Y5X3 404 aa12.81□□□□□ -0.36
CD9-210ENST00000543916 J3QLW9 94 aa12.8□□□□□ -0.36
CD9-210ENST00000543916 CSF3P09919 207 aa12.8□□□□□ -0.36
CD9-210ENST00000543916 ZNF19P17023 458 aa12.8□□□□□ -0.36
CD9-210ENST00000543916 CA6P23280 308 aa12.8□□□□□ -0.36
CD9-210ENST00000543916 ACKR3P25106 362 aa12.8□□□□□ -0.36
CD9-210ENST00000543916 KIR3DL2P43630 455 aa12.8□□□□□ -0.36
CD9-210ENST00000543916 PDLIM4P50479 330 aa12.8□□□□□ -0.36
CD9-210ENST00000543916 ETV1P50549 477 aa12.8□□□□□ -0.36
CD9-210ENST00000543916 DSCR9P59020 149 aa12.8□□□□□ -0.36
CD9-210ENST00000543916 ACTA2P62736 377 aa12.8□□□□□ -0.36
CD9-210ENST00000543916 ACTG2P63267 376 aa12.8□□□□□ -0.36
CD9-210ENST00000543916 MVKQ03426 396 aa12.8□□□□□ -0.36
CD9-210ENST00000543916 KCTD20Q7Z5Y7 419 aa12.8□□□□□ -0.36
CD9-210ENST00000543916 ELMOD2Q8IZ81 293 aa12.8□□□□□ -0.36
CD9-210ENST00000543916 CIARTQ8N365 385 aaPredicted RBP12.8□□□□□ -0.36
CD9-210ENST00000543916 PRSS35Q8N3Z0 413 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms