RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	CD300LB	A8K4G0	201 aa		8.71	□□□□□ -1.02
CPSF7-221	ENST00000543545		H3BSA7	217 aa		8.71	□□□□□ -1.02
CPSF7-221	ENST00000543545	SYT7	O43581	403 aa		8.71	□□□□□ -1.02
CPSF7-221	ENST00000543545	MTRF1	O75570	445 aa	Known RBP	8.71	□□□□□ -1.02
CPSF7-221	ENST00000543545	TTR	P02766	147 aa		8.71	□□□□□ -1.02
CPSF7-221	ENST00000543545	UBC	P0CG48	685 aa	Known RBP	8.71	□□□□□ -1.02
CPSF7-221	ENST00000543545	PRF1	P14222	555 aa		8.71	□□□□□ -1.02
CPSF7-221	ENST00000543545	ZNF250	P15622	560 aa		8.71	□□□□□ -1.02
CPSF7-221	ENST00000543545	ALDH3B1	P43353	468 aa		8.71	□□□□□ -1.02
CPSF7-221	ENST00000543545	KIR3DL2	P43630	455 aa		8.71	□□□□□ -1.02
CPSF7-221	ENST00000543545	TGM4	P49221	684 aa		8.71	□□□□□ -1.02
CPSF7-221	ENST00000543545	GSK3A	P49840	483 aa		8.71	□□□□□ -1.02
CPSF7-221	ENST00000543545	CCR9	P51686	369 aa		8.71	□□□□□ -1.02
CPSF7-221	ENST00000543545	EMX1	Q04741	257 aa	Predicted RBP	8.71	□□□□□ -1.02
CPSF7-221	ENST00000543545	PSG7	Q13046	419 aa		8.71	□□□□□ -1.02
CPSF7-221	ENST00000543545	MSMP	Q1L6U9	139 aa		8.71	□□□□□ -1.02
CPSF7-221	ENST00000543545	TMEM244	Q5VVB8	128 aa		8.71	□□□□□ -1.02
CPSF7-221	ENST00000543545	FDX2	Q6P4F2	183 aa		8.71	□□□□□ -1.02
CPSF7-221	ENST00000543545	FBXW12	Q6X9E4	464 aa		8.71	□□□□□ -1.02
CPSF7-221	ENST00000543545	C20orf204	Q6ZNR8	217 aa		8.71	□□□□□ -1.02
CPSF7-221	ENST00000543545	ZNF367	Q7RTV3	350 aa		8.71	□□□□□ -1.02
CPSF7-221	ENST00000543545	BHLHE23	Q8NDY6	225 aa		8.71	□□□□□ -1.02
CPSF7-221	ENST00000543545	OR5AK2	Q8NH90	309 aa		8.71	□□□□□ -1.02
CPSF7-221	ENST00000543545	PDCD1LG2	Q9BQ51	273 aa		8.71	□□□□□ -1.02
CPSF7-221	ENST00000543545	REPIN1	Q9BWE0	567 aa	Known RBP	8.71	□□□□□ -1.02
CPSF7-221	ENST00000543545	OPA3	Q9H6K4	179 aa		8.71	□□□□□ -1.02
CPSF7-221	ENST00000543545	ZNF696	Q9H7X3	374 aa		8.71	□□□□□ -1.02
CPSF7-221	ENST00000543545	VCX3A	Q9NNX9	186 aa		8.71	□□□□□ -1.02
CPSF7-221	ENST00000543545	ACOT13	Q9NPJ3	140 aa		8.71	□□□□□ -1.02
CPSF7-221	ENST00000543545	CBLN4	Q9NTU7	201 aa		8.71	□□□□□ -1.02
CPSF7-221	ENST00000543545	ZNF391	Q9UJN7	358 aa		8.71	□□□□□ -1.02
CPSF7-221	ENST00000543545	ABCA4	P78363	2273 aa		8.71	□□□□□ -1.02
CPSF7-221	ENST00000543545	LOC107986453	A0A1B0GWG9	222 aa		8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	TMEM212	A6NML5	194 aa		8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	OR4C45	A6NMZ5	311 aa		8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	ANKRD30BL	A7E2S9	258 aa		8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	ZFPL1	O95159	310 aa		8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	LALBA	P00709	142 aa		8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	IGHV3-13	P01766	116 aa		8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	SOD3	P08294	240 aa		8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	RPSA	P08865	295 aa	Known RBP	8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	ATP6V1B1	P15313	513 aa		8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	CEL	P19835	753 aa		8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	PSMB9	P28065	219 aa		8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	DDOST	P39656	456 aa		8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	MAP2K3	P46734	347 aa		8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	EVX1	P49640	407 aa		8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	KRTAP10-9	P60411	292 aa		8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	FAM3A	P98173	230 aa		8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	RIPPLY1	Q0D2K3	151 aa		8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	CDK5R1	Q15078	307 aa		8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	EFNB3	Q15768	340 aa		8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	TBCE	Q15813	527 aa	Predicted RBP	8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	NEDD8	Q15843	81 aa		8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	XAF1	Q6GPH4	301 aa		8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	KCTD8	Q6ZWB6	473 aa		8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	DOK3	Q7L591	496 aa		8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	ZNF485	Q8NCK3	441 aa		8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	SEMA6D	Q8NFY4	1073 aa		8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	OR56B2P	Q8NGI1	322 aa		8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	NRGN	Q92686	78 aa		8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	GHSR	Q92847	366 aa		8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	UFD1	Q92890	307 aa		8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	RNF166	Q96A37	237 aa	Predicted RBP	8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	SPSB4	Q96A44	273 aa		8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	LYZL4	Q96KX0	146 aa		8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	CCL19	Q99731	98 aa		8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	VRK1	Q99986	396 aa	Predicted RBP	8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	SOX7	Q9BT81	388 aa		8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	MYEF2	Q9P2K5	600 aa	Known RBP	8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	ST6GALNAC2	Q9UJ37	374 aa		8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	HHLA2	Q9UM44	414 aa		8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	SIRT4	Q9Y6E7	314 aa	Predicted RBP	8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	PMF1-BGLAP	U3KQ54	211 aa		8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	ROS1	P08922	2347 aa		8.7	□□□□□ -1.02
CPSF7-221	ENST00000543545	IGLV3-9	A0A075B6K5	115 aa		8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545		A0A1B0GTI1	187 aa		8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	hCG_38984	A0A1B0GV85	526 aa		8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	MAGEA13P	A6NCF6	341 aa		8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545		M0R233	179 aa		8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	OGG1	O15527	345 aa		8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	TPD52L2	O43399	206 aa	Known RBP	8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	SPRY3	O43610	288 aa		8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	DHRS3	O75911	302 aa		8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	DANCR	P0C864	163 aa		8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	NAT2	P11245	290 aa		8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	ZNF12	P17014	697 aa		8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	ZNF20	P17024	532 aa		8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	KITLG	P21583	273 aa		8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	ACHE	P22303	614 aa		8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	GNAL	P38405	381 aa		8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	LIPA	P38571	399 aa		8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	ZNF81	P51508	661 aa		8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	BDH1	Q02338	343 aa		8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	MST1L	Q2TV78	715 aa		8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	ZMAT1	Q5H9K5	638 aa		8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	ARMCX4	Q5H9R4	360 aa		8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	LIPK	Q5VXJ0	399 aa		8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	DMKN	Q6E0U4	476 aa	Predicted RBP	8.69	□□□□□ -1.02
CPSF7-221	ENST00000543545	FTMT	Q8N4E7	242 aa		8.69	□□□□□ -1.02

Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms