RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 USF2Q15853 346 aaPredicted RBP3.42□□□□□ -1.86
MDM2-229ENST00000543046 HLA-BQ31612 363 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 FAM174BQ3ZCQ3 159 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 BSPRYQ5W0U4 402 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 CYB5R2Q6BCY4 276 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 OR52W1Q6IF63 320 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 KRTAP5-11Q6L8G4 156 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 SLC39A4Q6P5W5 647 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 DRAM2Q6UX65 266 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 CD300LGQ6UXG3 332 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 HIST2H3AQ71DI3 136 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 C6orf120Q7Z4R8 191 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 MYPOPQ86VE0 399 aaPredicted RBP3.42□□□□□ -1.86
MDM2-229ENST00000543046 SIAH3Q8IW03 269 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 TOMM5Q8N4H5 51 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 ACBD7Q8N6N7 88 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 CCNYQ8ND76 341 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 OR4K2Q8NGD2 314 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 OR10Q1Q8NGQ4 319 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 OR9A1PQ8NGU1 263 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 OR52P1PQ8NH57 321 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 OR1L3Q8NH93 324 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 PIGXQ8TBF5 258 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 M1APQ8TC57 530 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 RNASEH2CQ8TDP1 164 aaKnown RBP3.42□□□□□ -1.86
MDM2-229ENST00000543046 HAVCR2Q8TDQ0 301 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 NEK7Q8TDX7 302 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 CA5BP1Q8WTZ4 195 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 TAF15Q92804 592 aaKnown RBP eCLIP3.42□□□□□ -1.86
MDM2-229ENST00000543046 ARL11Q969Q4 196 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 SPSB1Q96BD6 273 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 SMIM8Q96KF7 97 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 TEX37Q96LM6 180 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 KLHL5Q96PQ7 755 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 OR5B2Q96R09 309 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 TAAR1Q96RJ0 339 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 PEBP4Q96S96 227 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 INTS14Q96SY0 518 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 CCDC3Q9BQI4 270 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 PIGQQ9BRB3 760 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 FAIM2Q9BWQ8 316 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 PRRG4Q9BZD6 226 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 TM6SF2Q9BZW4 377 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 SYT4Q9H2B2 425 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 TUBB1Q9H4B7 451 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 LMAN1LQ9HAT1 526 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 CDH20Q9HBT6 801 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 POPDC3Q9HBV1 291 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 FGF20Q9NP95 211 aaPredicted RBP3.42□□□□□ -1.86
MDM2-229ENST00000543046 LHX9Q9NQ69 397 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 C19orf25Q9UFG5 118 aaPredicted RBP3.42□□□□□ -1.86
MDM2-229ENST00000543046 PPP1R3CQ9UQK1 317 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 SLC35A3Q9Y2D2 325 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 SLC9A8Q9Y2E8 581 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 NEUROG3Q9Y4Z2 214 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 PCYT1BQ9Y5K3 369 aaPredicted RBP3.42□□□□□ -1.86
MDM2-229ENST00000543046 FLVCR1Q9Y5Y0 555 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 GLI3P10071 1580 aa3.42□□□□□ -1.86
MDM2-229ENST00000543046 GBF1Q92538 1859 aa3.41□□□□□ -1.86
MDM2-229ENST00000543046 IGLV3-22A0A075B6J6 115 aa3.41□□□□□ -1.86
MDM2-229ENST00000543046 A0A1W2PPK0 400 aa3.41□□□□□ -1.86
MDM2-229ENST00000543046 NPIPA2E9PIF3 369 aa3.41□□□□□ -1.86
MDM2-229ENST00000543046 CREBL2O60519 120 aaPredicted RBP3.41□□□□□ -1.86
MDM2-229ENST00000543046 GRAP2O75791 330 aa3.41□□□□□ -1.86
MDM2-229ENST00000543046 AHSA1O95433 338 aa3.41□□□□□ -1.86
MDM2-229ENST00000543046 PRAMEF12O95522 483 aa3.41□□□□□ -1.86
MDM2-229ENST00000543046 DUS4LO95620 317 aaKnown RBP3.41□□□□□ -1.86
MDM2-229ENST00000543046 AIFM1O95831 613 aa3.41□□□□□ -1.86
MDM2-229ENST00000543046 CD8AP01732 235 aa3.41□□□□□ -1.86
MDM2-229ENST00000543046 HLA-DPB1P04440 258 aa3.41□□□□□ -1.86
MDM2-229ENST00000543046 SERPIND1P05546 499 aa3.41□□□□□ -1.86
MDM2-229ENST00000543046 CD5P06127 495 aa3.41□□□□□ -1.86
MDM2-229ENST00000543046 CSN3P07498 182 aa3.41□□□□□ -1.86
MDM2-229ENST00000543046 ELK1P19419 428 aa3.41□□□□□ -1.86
MDM2-229ENST00000543046 NT5EP21589 574 aa3.41□□□□□ -1.86
MDM2-229ENST00000543046 BCKDHBP21953 392 aa3.41□□□□□ -1.86
MDM2-229ENST00000543046 CYP2F1P24903 491 aa3.41□□□□□ -1.86
MDM2-229ENST00000543046 ACKR3P25106 362 aa3.41□□□□□ -1.86
MDM2-229ENST00000543046 HTR2CP28335 458 aa3.41□□□□□ -1.86
MDM2-229ENST00000543046 TEAD1P28347 426 aa3.41□□□□□ -1.86
MDM2-229ENST00000543046 KDELR2P33947 212 aa3.41□□□□□ -1.86
MDM2-229ENST00000543046 CD200P41217 278 aa3.41□□□□□ -1.86
MDM2-229ENST00000543046 SOX3P41225 446 aa3.41□□□□□ -1.86
MDM2-229ENST00000543046 CRISP1P54107 249 aa3.41□□□□□ -1.86
MDM2-229ENST00000543046 CLDN8P56748 225 aa3.41□□□□□ -1.86
MDM2-229ENST00000543046 KLF3P57682 345 aaPredicted RBP3.41□□□□□ -1.86
MDM2-229ENST00000543046 MTPNP58546 118 aa3.41□□□□□ -1.86
MDM2-229ENST00000543046 DAOAP59103 153 aa3.41□□□□□ -1.86
MDM2-229ENST00000543046 TPI1P60174 286 aa3.41□□□□□ -1.86
MDM2-229ENST00000543046 ARF6P62330 175 aa3.41□□□□□ -1.86
MDM2-229ENST00000543046 CRADDP78560 199 aa3.41□□□□□ -1.86
MDM2-229ENST00000543046 MRPS10P82664 201 aaKnown RBP3.41□□□□□ -1.86
MDM2-229ENST00000543046 VLDLRP98155 873 aa3.41□□□□□ -1.86
MDM2-229ENST00000543046 SKP2Q13309 424 aa3.41□□□□□ -1.86
MDM2-229ENST00000543046 GAMTQ14353 236 aa3.41□□□□□ -1.86
MDM2-229ENST00000543046 SLC10A1Q14973 349 aa3.41□□□□□ -1.86
MDM2-229ENST00000543046 PAFAH1B3Q15102 231 aaKnown RBP3.41□□□□□ -1.86
MDM2-229ENST00000543046 SURF2Q15527 256 aaPredicted RBP3.41□□□□□ -1.86
MDM2-229ENST00000543046 ISXQ2M1V0 245 aa3.41□□□□□ -1.86
MDM2-229ENST00000543046 RFTN2Q52LD8 501 aaPredicted RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms