RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 GBF1Q92538 1859 aa9□□□□□ -0.97
TOP3A-208ENST00000542570 DENND4CQ5VZ89 1909 aa9□□□□□ -0.97
TOP3A-208ENST00000542570 A0A087WZY1 265 aa9□□□□□ -0.97
TOP3A-208ENST00000542570 LOC100289279A0A1B0GTE1 492 aa9□□□□□ -0.97
TOP3A-208ENST00000542570 A0A1W2PQD3 144 aa9□□□□□ -0.97
TOP3A-208ENST00000542570 SULT1C4O75897 302 aa9□□□□□ -0.97
TOP3A-208ENST00000542570 PNPP00491 289 aa9□□□□□ -0.97
TOP3A-208ENST00000542570 NRASP01111 189 aa9□□□□□ -0.97
TOP3A-208ENST00000542570 IGHV3-13P01766 116 aa9□□□□□ -0.97
TOP3A-208ENST00000542570 IGHV3-7P01780 117 aa9□□□□□ -0.97
TOP3A-208ENST00000542570 CD3DP04234 171 aa9□□□□□ -0.97
TOP3A-208ENST00000542570 TCRBP04435 133 aa9□□□□□ -0.97
TOP3A-208ENST00000542570 SP1P08047 785 aa9□□□□□ -0.97
TOP3A-208ENST00000542570 AKAIN1P0CW23 69 aa9□□□□□ -0.97
TOP3A-208ENST00000542570 EDDM3BP56851 147 aa9□□□□□ -0.97
TOP3A-208ENST00000542570 FCN2Q15485 313 aa9□□□□□ -0.97
TOP3A-208ENST00000542570 PHLDA2Q53GA4 152 aa9□□□□□ -0.97
TOP3A-208ENST00000542570 SLC22A25Q6T423 547 aa9□□□□□ -0.97
TOP3A-208ENST00000542570 GTPBP8Q8N3Z3 284 aaPredicted RBP9□□□□□ -0.97
TOP3A-208ENST00000542570 INO80EQ8NBZ0 244 aaPredicted RBP9□□□□□ -0.97
TOP3A-208ENST00000542570 OR6F1Q8NGZ6 308 aa9□□□□□ -0.97
TOP3A-208ENST00000542570 THAP6Q8TBB0 222 aa9□□□□□ -0.97
TOP3A-208ENST00000542570 APOBEC4Q8WW27 367 aaKnown RBP9□□□□□ -0.97
TOP3A-208ENST00000542570 ASB10Q8WXI3 467 aa9□□□□□ -0.97
TOP3A-208ENST00000542570 PSMF1Q92530 271 aa9□□□□□ -0.97
TOP3A-208ENST00000542570 VRK1Q99986 396 aaPredicted RBP9□□□□□ -0.97
TOP3A-208ENST00000542570 PCDHB16Q9NRJ7 776 aa9□□□□□ -0.97
TOP3A-208ENST00000542570 ZNF230Q9UIE0 474 aaPredicted RBP9□□□□□ -0.97
TOP3A-208ENST00000542570 IGKV1D-43A0A0B4J1Z2 117 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 RAB27BO00194 218 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 GALR2O43603 387 aaPredicted RBP8.99□□□□□ -0.97
TOP3A-208ENST00000542570 PLPP2O43688 288 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 KLF7O75840 302 aaPredicted RBP8.99□□□□□ -0.97
TOP3A-208ENST00000542570 AQP8O94778 261 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 HLA-AP01891 365 aaKnown RBP8.99□□□□□ -0.97
TOP3A-208ENST00000542570 TMIGD3P0DMS9 266 aaPredicted RBP8.99□□□□□ -0.97
TOP3A-208ENST00000542570 GRB2P62993 217 aaKnown RBP8.99□□□□□ -0.97
TOP3A-208ENST00000542570 IGLV3-21P80748 117 aaPredicted RBP8.99□□□□□ -0.97
TOP3A-208ENST00000542570 EGR3Q06889 387 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 COL19A1Q14993 1142 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 CNN3Q15417 329 aaKnown RBP8.99□□□□□ -0.97
TOP3A-208ENST00000542570 STEAP1BQ6NZ63 245 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 BAIAP2L2Q6UXY1 529 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 OR6M1Q8NGM8 313 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 COQ8AQ8NI60 647 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 CPNE5Q9HCH3 593 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 NTMQ9P121 344 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 MS4A18H0YCH9 400 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 AIPO00170 330 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 GP1BAP07359 652 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 RAB40ALP0C0E4 278 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 ANKRD34CP0C6C1 535 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 ACSM4P0C7M7 580 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 PSMB1P20618 241 aaKnown RBP8.99□□□□□ -0.97
TOP3A-208ENST00000542570 PTGS2P35354 604 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 GPM6AP51674 278 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 MS4A18Q3C1V0 323 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 FIP1L1Q6UN15 594 aaKnown RBP8.99□□□□□ -0.97
TOP3A-208ENST00000542570 OR5L1Q8NGL2 311 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 KCNG3Q8TAE7 436 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 CHPT1Q8WUD6 406 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 RAB40AQ8WXH6 277 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 ZNF837Q96EG3 531 aaPredicted RBP8.99□□□□□ -0.97
TOP3A-208ENST00000542570 TINAGL1Q9GZM7 467 aaPredicted RBP8.99□□□□□ -0.97
TOP3A-208ENST00000542570 DNTTIP1Q9H147 329 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 EXOGQ9Y2C4 368 aaKnown RBP8.99□□□□□ -0.97
TOP3A-208ENST00000542570 ACHEP22303 614 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 CD34P28906 385 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 AKR1C2P52895 323 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 SLC25A1P53007 311 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 AGAP6Q5VW22 663 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 LRRTM1Q86UE6 522 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 SLC7A5P1Q8MH63 180 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 FBXW5Q969U6 566 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 ADAM19Q9H013 955 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 RNF32Q9H0A6 362 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 NELFAQ9H3P2 528 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 AKIP1Q9NQ31 210 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 KCNIP3Q9Y2W7 256 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 PRR19A6NJB7 356 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 ZNF891A8MT65 544 aaPredicted RBP8.99□□□□□ -0.97
TOP3A-208ENST00000542570 B4DXG7 233 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 C21orf140B9A014 251 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 RLN2P04090 185 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 TP53P04637 393 aaPredicted RBP8.99□□□□□ -0.97
TOP3A-208ENST00000542570 RBP2P50120 134 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 GRK1Q15835 563 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 C11orf91Q3C1V1 193 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 OR56B2PQ8NGI1 322 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 OR1J1Q8NGS3 322 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 OR1F12Q8NHA8 337 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 FAM131CQ96AQ9 280 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 MNTQ99583 582 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 SMIM3Q9BZL3 60 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 OR2B2Q9GZK3 357 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 TGIF2Q9GZN2 237 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 ZCCHC4Q9H5U6 513 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 SLC7A10Q9NS82 523 aa8.99□□□□□ -0.97
TOP3A-208ENST00000542570 LSM5Q9Y4Y9 91 aaKnown RBP8.99□□□□□ -0.97
TOP3A-208ENST00000542570 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms