RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 CCDC54Q8NEL0 328 aa14.4□□□□□ -0.1
VARS2-212ENST00000542001 RNF128Q8TEB7 428 aa14.4□□□□□ -0.1
VARS2-212ENST00000542001 SCARB1Q8WTV0 552 aa14.4□□□□□ -0.1
VARS2-212ENST00000542001 ZNF2Q9BSG1 426 aaPredicted RBP14.4□□□□□ -0.1
VARS2-212ENST00000542001 ZCCHC4Q9H5U6 513 aa14.4□□□□□ -0.1
VARS2-212ENST00000542001 RALGAPA1Q6GYQ0 2036 aa14.4□□□□□ -0.1
VARS2-212ENST00000542001 PLPP3O14495 311 aa14.4□□□□□ -0.1
VARS2-212ENST00000542001 ADAP1O75689 374 aa14.4□□□□□ -0.1
VARS2-212ENST00000542001 HLA-DQB1P01920 261 aa14.4□□□□□ -0.1
VARS2-212ENST00000542001 CCL4P13236 92 aa14.4□□□□□ -0.1
VARS2-212ENST00000542001 SLC25A1P53007 311 aa14.4□□□□□ -0.1
VARS2-212ENST00000542001 ATP1B3P54709 279 aa14.4□□□□□ -0.1
VARS2-212ENST00000542001 TMEM200AQ86VY9 491 aa14.4□□□□□ -0.1
VARS2-212ENST00000542001 LIPHQ8WWY8 451 aa14.4□□□□□ -0.1
VARS2-212ENST00000542001 KISS1RQ969F8 398 aaPredicted RBP14.4□□□□□ -0.1
VARS2-212ENST00000542001 ARHGAP5-AS1Q96IT6 56 aa14.4□□□□□ -0.1
VARS2-212ENST00000542001 METTL9Q9H1A3 318 aa14.4□□□□□ -0.1
VARS2-212ENST00000542001 HAO2Q9NYQ3 351 aa14.4□□□□□ -0.1
VARS2-212ENST00000542001 B3GALT5Q9Y2C3 310 aa14.4□□□□□ -0.1
VARS2-212ENST00000542001 PHF1O43189 567 aaPredicted RBP14.39□□□□□ -0.11
VARS2-212ENST00000542001 IGF2P01344 180 aa14.39□□□□□ -0.11
VARS2-212ENST00000542001 ACSM1Q08AH1 577 aa14.39□□□□□ -0.11
VARS2-212ENST00000542001 SLC43A2Q8N370 569 aa14.39□□□□□ -0.11
VARS2-212ENST00000542001 NKAIN3Q8N8D7 197 aa14.39□□□□□ -0.11
VARS2-212ENST00000542001 GLYATL2Q8WU03 294 aa14.39□□□□□ -0.11
VARS2-212ENST00000542001 MVB12AQ96EY5 273 aa14.39□□□□□ -0.11
VARS2-212ENST00000542001 LRRC46Q96FV0 321 aa14.39□□□□□ -0.11
VARS2-212ENST00000542001 SYT3Q9BQG1 590 aa14.39□□□□□ -0.11
VARS2-212ENST00000542001 CCL2P13500 99 aa14.39□□□□□ -0.11
VARS2-212ENST00000542001 OR3A4PP47883 348 aa14.39□□□□□ -0.11
VARS2-212ENST00000542001 INSM1Q01101 510 aaPredicted RBP14.39□□□□□ -0.11
VARS2-212ENST00000542001 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.39□□□□□ -0.11
VARS2-212ENST00000542001 RNLSQ5VYX0 342 aa14.39□□□□□ -0.11
VARS2-212ENST00000542001 ANKRD16Q6P6B7 361 aa14.39□□□□□ -0.11
VARS2-212ENST00000542001 DICER1Q9UPY3 1922 aaKnown RBP14.39□□□□□ -0.11
VARS2-212ENST00000542001 TAS2R31P59538 309 aa14.39□□□□□ -0.11
VARS2-212ENST00000542001 MGAT2Q10469 447 aa14.39□□□□□ -0.11
VARS2-212ENST00000542001 WIPI1Q5MNZ9 446 aaPredicted RBP14.39□□□□□ -0.11
VARS2-212ENST00000542001 CD200R1LQ6Q8B3 271 aa14.39□□□□□ -0.11
VARS2-212ENST00000542001 NOSIPQ9Y314 301 aaKnown RBP14.39□□□□□ -0.11
VARS2-212ENST00000542001 A0A0D9SG52 128 aa14.38□□□□□ -0.11
VARS2-212ENST00000542001 ENPP1P22413 925 aa14.38□□□□□ -0.11
VARS2-212ENST00000542001 CPT2P23786 658 aa14.38□□□□□ -0.11
VARS2-212ENST00000542001 TMEM71Q6P5X7 295 aa14.38□□□□□ -0.11
VARS2-212ENST00000542001 RDH5Q92781 318 aa14.38□□□□□ -0.11
VARS2-212ENST00000542001 MS4A3Q96HJ5 214 aa14.38□□□□□ -0.11
VARS2-212ENST00000542001 KLHDC3Q9BQ90 382 aa14.38□□□□□ -0.11
VARS2-212ENST00000542001 PCDHB16Q9NRJ7 776 aa14.38□□□□□ -0.11
VARS2-212ENST00000542001 OCIAD1Q9NX40 245 aa14.38□□□□□ -0.11
VARS2-212ENST00000542001 SH3BGRL2Q9UJC5 107 aa14.38□□□□□ -0.11
VARS2-212ENST00000542001 HS3ST1O14792 307 aa14.38□□□□□ -0.11
VARS2-212ENST00000542001 GDF9O60383 454 aa14.38□□□□□ -0.11
VARS2-212ENST00000542001 SERPINE2P07093 398 aa14.38□□□□□ -0.11
VARS2-212ENST00000542001 MGMTP16455 207 aa14.38□□□□□ -0.11
VARS2-212ENST00000542001 ADRA2CP18825 462 aa14.38□□□□□ -0.11
VARS2-212ENST00000542001 MSR1P21757 451 aa14.38□□□□□ -0.11
VARS2-212ENST00000542001 SMRP1Q8NCR6 262 aa14.38□□□□□ -0.11
VARS2-212ENST00000542001 ST8SIA1Q92185 356 aa14.38□□□□□ -0.11
VARS2-212ENST00000542001 ICAM5Q9UMF0 924 aa14.38□□□□□ -0.11
VARS2-212ENST00000542001 HLXQ14774 488 aaPredicted RBP14.38□□□□□ -0.11
VARS2-212ENST00000542001 GRAMD2AQ8IUY3 354 aa14.38□□□□□ -0.11
VARS2-212ENST00000542001 MAML2Q8IZL2 1156 aaPredicted RBP14.38□□□□□ -0.11
VARS2-212ENST00000542001 RRNAD1Q96FB5 475 aaKnown RBP14.38□□□□□ -0.11
VARS2-212ENST00000542001 PCDHGA9Q9Y5G4 932 aaKnown RBP14.38□□□□□ -0.11
VARS2-212ENST00000542001 SMIM10L1P0DMW3 83 aa14.37□□□□□ -0.11
VARS2-212ENST00000542001 EFNA3P52797 238 aa14.37□□□□□ -0.11
VARS2-212ENST00000542001 NXPH1P58417 271 aa14.37□□□□□ -0.11
VARS2-212ENST00000542001 KLF9Q13886 244 aaPredicted RBP14.37□□□□□ -0.11
VARS2-212ENST00000542001 DCAF12L2Q5VW00 463 aa14.37□□□□□ -0.11
VARS2-212ENST00000542001 OR51H1Q8NH63 302 aa14.37□□□□□ -0.11
VARS2-212ENST00000542001 C2CD4CQ8TF44 421 aa14.37□□□□□ -0.11
VARS2-212ENST00000542001 SLC25A38Q96DW6 304 aa14.37□□□□□ -0.11
VARS2-212ENST00000542001 SPACA9Q96E40 222 aaPredicted RBP14.37□□□□□ -0.11
VARS2-212ENST00000542001 SCMH1Q96GD3 660 aa14.37□□□□□ -0.11
VARS2-212ENST00000542001 SMIM10Q96HG1 83 aa14.37□□□□□ -0.11
VARS2-212ENST00000542001 MYOTQ9UBF9 498 aa14.37□□□□□ -0.11
VARS2-212ENST00000542001 PUS1Q9Y606 427 aaKnown RBP eCLIP14.37□□□□□ -0.11
VARS2-212ENST00000542001 COL6A6A6NMZ7 2263 aa14.37□□□□□ -0.11
VARS2-212ENST00000542001 ANKRD20A5PA0PJZ0 165 aa14.37□□□□□ -0.11
VARS2-212ENST00000542001 SMCO3A2RU48 225 aa14.37□□□□□ -0.11
VARS2-212ENST00000542001 WNT11O96014 354 aa14.37□□□□□ -0.11
VARS2-212ENST00000542001 GLRA1P23415 457 aa14.37□□□□□ -0.11
VARS2-212ENST00000542001 KIR3DL2P43630 455 aa14.37□□□□□ -0.11
VARS2-212ENST00000542001 RPS27AP62979 156 aaKnown RBP14.37□□□□□ -0.11
VARS2-212ENST00000542001 UBA52P62987 128 aaKnown RBP14.37□□□□□ -0.11
VARS2-212ENST00000542001 ARG2P78540 354 aa14.37□□□□□ -0.11
VARS2-212ENST00000542001 FZD5Q13467 585 aa14.37□□□□□ -0.11
VARS2-212ENST00000542001 FHL5Q5TD97 284 aa14.37□□□□□ -0.11
VARS2-212ENST00000542001 SLC26A10Q8NG04 563 aa14.37□□□□□ -0.11
VARS2-212ENST00000542001 FAM213BQ8TBF2 198 aa14.37□□□□□ -0.11
VARS2-212ENST00000542001 THOC3Q96J01 351 aaKnown RBP14.37□□□□□ -0.11
VARS2-212ENST00000542001 UCN2Q96RP3 112 aa14.37□□□□□ -0.11
VARS2-212ENST00000542001 MAGT1Q9H0U3 335 aa14.37□□□□□ -0.11
VARS2-212ENST00000542001 GJE1A6NN92 205 aa14.37□□□□□ -0.11
VARS2-212ENST00000542001 UBE2NP61088 152 aaKnown RBP14.37□□□□□ -0.11
VARS2-212ENST00000542001 TMEM255AQ5JRV8 349 aa14.37□□□□□ -0.11
VARS2-212ENST00000542001 C6orf201Q7Z4U5 140 aa14.37□□□□□ -0.11
VARS2-212ENST00000542001 LRFN5Q96NI6 719 aa14.37□□□□□ -0.11
VARS2-212ENST00000542001 ZNF416Q9BWM5 594 aa14.37□□□□□ -0.11
VARS2-212ENST00000542001 GHITMQ9H3K2 345 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms