RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 TRAM2Q15035 370 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 KIAA0040Q15053 153 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 NDUFA5Q16718 116 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 HNRNPA1L2Q32P51 320 aaKnown RBP3.14□□□□□ -1.91
SNHG1-217ENST00000541578 ZBED5Q49AG3 693 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 NKAIN1Q4KMZ8 207 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 FBXO48Q5FWF7 155 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 LIN9Q5TKA1 542 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 STUMQ69YW2 141 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 CGB2Q6NT52 195 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 ULK3Q6PHR2 472 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 ZNF547Q8IVP9 402 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 NKAIN4Q8IVV8 208 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 PIANPQ8IYJ0 282 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 FAM9CQ8IZT9 166 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 GPD1LQ8N335 351 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 IFT81Q8WYA0 676 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 ELSPBP1Q96BH3 223 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 DNAJC1Q96KC8 554 aaKnown RBP3.14□□□□□ -1.91
SNHG1-217ENST00000541578 CEP19Q96LK0 163 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 C9orf72Q96LT7 481 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 MAGEB18Q96M61 343 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 TSC22D3Q99576 134 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 ARHGDIGQ99819 225 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 RIOK2Q9BVS4 552 aaKnown RBP3.14□□□□□ -1.91
SNHG1-217ENST00000541578 DEFB126Q9BYW3 111 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 UCK2Q9BZX2 261 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 C12orf10Q9HB07 376 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 BEX1Q9HBH7 125 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 RETNQ9HD89 108 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 KCNJ16Q9NPI9 418 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 TMEM9BQ9NQ34 198 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 SLC39A1Q9NY26 324 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 CFL2Q9Y281 166 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 SLC17A4Q9Y2C5 497 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 RHBDD3Q9Y3P4 386 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 CSAG2Q9Y5P2 127 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 ZFHX4Q86UP3 3567 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 CEP295Q9C0D2 2601 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 NFASCO94856 1347 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 LAMA4Q16363 1823 aa3.14□□□□□ -1.91
SNHG1-217ENST00000541578 PHF3Q92576 2039 aaKnown RBP3.14□□□□□ -1.91
SNHG1-217ENST00000541578 ACACAQ13085 2346 aa3.13□□□□□ -1.91
SNHG1-217ENST00000541578 TRAV6A0A075B6T7 132 aa3.13□□□□□ -1.91
SNHG1-217ENST00000541578 A0A0J9YYE9 177 aa3.13□□□□□ -1.91
SNHG1-217ENST00000541578 A0A1W2PPV4 95 aa3.13□□□□□ -1.91
SNHG1-217ENST00000541578 GSTTP1A0A1W2PQM5 241 aa3.13□□□□□ -1.91
SNHG1-217ENST00000541578 ZW10O43264 779 aa3.13□□□□□ -1.91
SNHG1-217ENST00000541578 HCRTR1O43613 425 aa3.13□□□□□ -1.91
SNHG1-217ENST00000541578 EIF4E2O60573 245 aaKnown RBP3.13□□□□□ -1.91
SNHG1-217ENST00000541578 SMIM24O75264 130 aa3.13□□□□□ -1.91
SNHG1-217ENST00000541578 NPPAP01160 153 aa3.13□□□□□ -1.91
SNHG1-217ENST00000541578 TRBC1P01850 177 aa3.13□□□□□ -1.91
SNHG1-217ENST00000541578 SRMP19623 302 aa3.13□□□□□ -1.91
SNHG1-217ENST00000541578 GATA2P23769 480 aaPredicted RBP3.13□□□□□ -1.91
SNHG1-217ENST00000541578 IL32P24001 234 aa3.13□□□□□ -1.91
SNHG1-217ENST00000541578 AK4P27144 223 aaPredicted RBP3.13□□□□□ -1.91
SNHG1-217ENST00000541578 CD82P27701 267 aa3.13□□□□□ -1.91
SNHG1-217ENST00000541578 SLC26A3P40879 764 aa3.13□□□□□ -1.91
SNHG1-217ENST00000541578 CBX5P45973 191 aa3.13□□□□□ -1.91
SNHG1-217ENST00000541578 SP4Q02446 784 aa3.13□□□□□ -1.91
SNHG1-217ENST00000541578 IRF8Q02556 426 aa3.13□□□□□ -1.91
SNHG1-217ENST00000541578 ZNF92Q03936 586 aa3.13□□□□□ -1.91
SNHG1-217ENST00000541578 ZNF33AQ06730 810 aa3.13□□□□□ -1.91
SNHG1-217ENST00000541578 NCF4Q15080 339 aa3.13□□□□□ -1.91
SNHG1-217ENST00000541578 CCNJQ5T5M9 372 aa3.13□□□□□ -1.91
SNHG1-217ENST00000541578 MLIPQ5VWP3 458 aa3.13□□□□□ -1.91
SNHG1-217ENST00000541578 OAFQ86UD1 273 aa3.13□□□□□ -1.91
SNHG1-217ENST00000541578 CMTM8Q8IZV2 173 aa3.13□□□□□ -1.91
SNHG1-217ENST00000541578 CD177Q8N6Q3 437 aa3.13□□□□□ -1.91
SNHG1-217ENST00000541578 METTL13Q8N6R0 699 aa3.13□□□□□ -1.91
SNHG1-217ENST00000541578 CCDC112Q8NEF3 446 aa3.13□□□□□ -1.91
SNHG1-217ENST00000541578 OR8K3Q8NH51 312 aa3.13□□□□□ -1.91
SNHG1-217ENST00000541578 DTX3LQ8TDB6 740 aa3.13□□□□□ -1.91
SNHG1-217ENST00000541578 NDRG1Q92597 394 aaKnown RBP3.13□□□□□ -1.91
SNHG1-217ENST00000541578 ARPC1AQ92747 370 aa3.13□□□□□ -1.91
SNHG1-217ENST00000541578 EEF1AKMT3Q96AZ1 226 aa3.13□□□□□ -1.91
SNHG1-217ENST00000541578 PIK3IP1Q96FE7 263 aa3.13□□□□□ -1.91
SNHG1-217ENST00000541578 B3GALT6Q96L58 329 aa3.13□□□□□ -1.91
SNHG1-217ENST00000541578 C1orf147Q96MC9 270 aaPredicted RBP3.13□□□□□ -1.91
SNHG1-217ENST00000541578 OPALINQ96PE5 141 aa3.13□□□□□ -1.91
SNHG1-217ENST00000541578 C20orf85Q9H1P6 137 aa3.13□□□□□ -1.91
SNHG1-217ENST00000541578 DMAP1Q9NPF5 467 aaPredicted RBP3.13□□□□□ -1.91
SNHG1-217ENST00000541578 SDHAF3Q9NRP4 125 aa3.13□□□□□ -1.91
SNHG1-217ENST00000541578 CLEC4EQ9ULY5 219 aa3.13□□□□□ -1.91
SNHG1-217ENST00000541578 HCFC1P51610 2035 aa3.13□□□□□ -1.91
SNHG1-217ENST00000541578 ASCC3Q8N3C0 2202 aaKnown RBP3.13□□□□□ -1.91
SNHG1-217ENST00000541578 BPTFQ12830 3046 aa3.12□□□□□ -1.91
SNHG1-217ENST00000541578 LRRK1Q38SD2 2015 aa3.12□□□□□ -1.91
SNHG1-217ENST00000541578 ZNF816-ZNF321PA0A0X1KG74 233 aa3.12□□□□□ -1.91
SNHG1-217ENST00000541578 LOC105371267A0A1B0GV96 52 aa3.12□□□□□ -1.91
SNHG1-217ENST00000541578 OR5K4A6NMS3 321 aa3.12□□□□□ -1.91
SNHG1-217ENST00000541578 CENPXA8MT69 81 aa3.12□□□□□ -1.91
SNHG1-217ENST00000541578 H3BNH8 94 aa3.12□□□□□ -1.91
SNHG1-217ENST00000541578 J3QKU1 62 aa3.12□□□□□ -1.91
SNHG1-217ENST00000541578 KMOO15229 486 aa3.12□□□□□ -1.91
SNHG1-217ENST00000541578 TRAPPC3O43617 180 aa3.12□□□□□ -1.91
SNHG1-217ENST00000541578 FKBP6O75344 327 aa3.12□□□□□ -1.91
SNHG1-217ENST00000541578 FARS2O95363 451 aaKnown RBP3.12□□□□□ -1.91
SNHG1-217ENST00000541578 LSM8O95777 96 aaKnown RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms