RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 RAP1BP61224 184 aa7.52□□□□□ -1.21
YBX3-211ENST00000541351 RAP1AP62834 184 aa7.52□□□□□ -1.21
YBX3-211ENST00000541351 POU4F2Q12837 409 aa7.52□□□□□ -1.21
YBX3-211ENST00000541351 SSX2Q16385 188 aa7.52□□□□□ -1.21
YBX3-211ENST00000541351 PCK2Q16822 640 aa7.52□□□□□ -1.21
YBX3-211ENST00000541351 ARMC4Q5T2S8 1044 aa7.52□□□□□ -1.21
YBX3-211ENST00000541351 HCP5Q6MZN7 132 aa7.52□□□□□ -1.21
YBX3-211ENST00000541351 ZNF429Q86V71 674 aa7.52□□□□□ -1.21
YBX3-211ENST00000541351 MNS1Q8NEH6 495 aa7.52□□□□□ -1.21
YBX3-211ENST00000541351 SPATA4Q8NEY3 305 aa7.52□□□□□ -1.21
YBX3-211ENST00000541351 OR13D1Q8NGV5 346 aa7.52□□□□□ -1.21
YBX3-211ENST00000541351 OR4Q3Q8NH05 313 aa7.52□□□□□ -1.21
YBX3-211ENST00000541351 AGR3Q8TD06 166 aa7.52□□□□□ -1.21
YBX3-211ENST00000541351 LRRC29Q8WV35 223 aa7.52□□□□□ -1.21
YBX3-211ENST00000541351 HDAC2Q92769 488 aaKnown RBP7.52□□□□□ -1.21
YBX3-211ENST00000541351 HDHD2Q9H0R4 259 aa7.52□□□□□ -1.21
YBX3-211ENST00000541351 DCLRE1BQ9H816 532 aa7.52□□□□□ -1.21
YBX3-211ENST00000541351 MRPL15Q9P015 296 aaKnown RBP7.52□□□□□ -1.21
YBX3-211ENST00000541351 PSMC3IPQ9P2W1 217 aaPredicted RBP7.52□□□□□ -1.21
YBX3-211ENST00000541351 EMCNQ9ULC0 261 aa7.52□□□□□ -1.21
YBX3-211ENST00000541351 ANGPT4Q9Y264 503 aa7.52□□□□□ -1.21
YBX3-211ENST00000541351 NDUFAF1Q9Y375 327 aa7.52□□□□□ -1.21
YBX3-211ENST00000541351 SORL1Q92673 2214 aa7.51□□□□□ -1.21
YBX3-211ENST00000541351 IGKV1D-43A0A0B4J1Z2 117 aa7.51□□□□□ -1.21
YBX3-211ENST00000541351 ACOT8O14734 319 aa7.51□□□□□ -1.21
YBX3-211ENST00000541351 RHBDL1O75783 438 aa7.51□□□□□ -1.21
YBX3-211ENST00000541351 COX7A1P24310 79 aa7.51□□□□□ -1.21
YBX3-211ENST00000541351 PAX6P26367 422 aa7.51□□□□□ -1.21
YBX3-211ENST00000541351 BRS3P32247 399 aa7.51□□□□□ -1.21
YBX3-211ENST00000541351 SLC25A1P53007 311 aa7.51□□□□□ -1.21
YBX3-211ENST00000541351 WDR4P57081 412 aaKnown RBP7.51□□□□□ -1.21
YBX3-211ENST00000541351 SLC34A1Q06495 639 aa7.51□□□□□ -1.21
YBX3-211ENST00000541351 FADDQ13158 208 aa7.51□□□□□ -1.21
YBX3-211ENST00000541351 GK2Q14410 553 aaPredicted RBP7.51□□□□□ -1.21
YBX3-211ENST00000541351 SEC23BQ15437 767 aa7.51□□□□□ -1.21
YBX3-211ENST00000541351 ABCA11PQ4W5N1 156 aa7.51□□□□□ -1.21
YBX3-211ENST00000541351 LINC00114Q6XXX2 140 aa7.51□□□□□ -1.21
YBX3-211ENST00000541351 MKXQ8IYA7 352 aa7.51□□□□□ -1.21
YBX3-211ENST00000541351 FAM185AQ8N0U4 392 aa7.51□□□□□ -1.21
YBX3-211ENST00000541351 FGFRL1Q8N441 504 aa7.51□□□□□ -1.21
YBX3-211ENST00000541351 OR8S1Q8NH09 359 aa7.51□□□□□ -1.21
YBX3-211ENST00000541351 TCP10LQ8TDR4 215 aa7.51□□□□□ -1.21
YBX3-211ENST00000541351 COQ7Q99807 217 aa7.51□□□□□ -1.21
YBX3-211ENST00000541351 TPT1P8Q9HAU6 139 aa7.51□□□□□ -1.21
YBX3-211ENST00000541351 USE1Q9NZ43 259 aa7.51□□□□□ -1.21
YBX3-211ENST00000541351 SCOCQ9UIL1 159 aa7.51□□□□□ -1.21
YBX3-211ENST00000541351 POLR1DQ9Y2S0 133 aa7.51□□□□□ -1.21
YBX3-211ENST00000541351 GGT3PA6NGU5 568 aa7.5□□□□□ -1.21
YBX3-211ENST00000541351 KPNA4O00629 521 aaPredicted RBP7.5□□□□□ -1.21
YBX3-211ENST00000541351 BHLHE40O14503 412 aa7.5□□□□□ -1.21
YBX3-211ENST00000541351 COPEO14579 308 aa7.5□□□□□ -1.21
YBX3-211ENST00000541351 ARG1P05089 322 aa7.5□□□□□ -1.21
YBX3-211ENST00000541351 CHRNGP07510 517 aa7.5□□□□□ -1.21
YBX3-211ENST00000541351 HCKP08631 526 aa7.5□□□□□ -1.21
YBX3-211ENST00000541351 ZCCHC18P0CG32 403 aa7.5□□□□□ -1.21
YBX3-211ENST00000541351 OR3A4PP47883 348 aa7.5□□□□□ -1.21
YBX3-211ENST00000541351 MTNR1BP49286 362 aa7.5□□□□□ -1.21
YBX3-211ENST00000541351 RPL27P61353 136 aaKnown RBP7.5□□□□□ -1.21
YBX3-211ENST00000541351 LSM6P62312 80 aaKnown RBP7.5□□□□□ -1.21
YBX3-211ENST00000541351 PGM2L1Q6PCE3 622 aa7.5□□□□□ -1.21
YBX3-211ENST00000541351 BLOC1S3Q6QNY0 202 aa7.5□□□□□ -1.21
YBX3-211ENST00000541351 ZNF826PQ6ZT77 177 aa7.5□□□□□ -1.21
YBX3-211ENST00000541351 C10orf67Q8IYJ2 551 aa7.5□□□□□ -1.21
YBX3-211ENST00000541351 GJC3Q8NFK1 279 aa7.5□□□□□ -1.21
YBX3-211ENST00000541351 LRRC8CQ8TDW0 803 aa7.5□□□□□ -1.21
YBX3-211ENST00000541351 SLC7A6Q92536 515 aa7.5□□□□□ -1.21
YBX3-211ENST00000541351 CDRT15Q96T59 188 aa7.5□□□□□ -1.21
YBX3-211ENST00000541351 MCHR1Q99705 422 aa7.5□□□□□ -1.21
YBX3-211ENST00000541351 WDR55Q9H6Y2 383 aaPredicted RBP7.5□□□□□ -1.21
YBX3-211ENST00000541351 WDR76Q9H967 626 aa7.5□□□□□ -1.21
YBX3-211ENST00000541351 EMC7Q9NPA0 242 aa7.5□□□□□ -1.21
YBX3-211ENST00000541351 HAO2Q9NYQ3 351 aa7.5□□□□□ -1.21
YBX3-211ENST00000541351 ZNF391Q9UJN7 358 aa7.5□□□□□ -1.21
YBX3-211ENST00000541351 CD300LBA8K4G0 201 aa7.49□□□□□ -1.21
YBX3-211ENST00000541351 SIGLEC5O15389 551 aa7.49□□□□□ -1.21
YBX3-211ENST00000541351 AHCYL1O43865 530 aa7.49□□□□□ -1.21
YBX3-211ENST00000541351 ABHD2P08910 425 aa7.49□□□□□ -1.21
YBX3-211ENST00000541351 DUX4L4P0CJ87 422 aa7.49□□□□□ -1.21
YBX3-211ENST00000541351 FUT1P19526 365 aa7.49□□□□□ -1.21
YBX3-211ENST00000541351 AQP2P41181 271 aa7.49□□□□□ -1.21
YBX3-211ENST00000541351 CDKN2CP42773 168 aa7.49□□□□□ -1.21
YBX3-211ENST00000541351 HOXA4Q00056 320 aaPredicted RBP7.49□□□□□ -1.21
YBX3-211ENST00000541351 TOP3AQ13472 1001 aaPredicted RBP7.49□□□□□ -1.21
YBX3-211ENST00000541351 ALG10Q5BKT4 473 aa7.49□□□□□ -1.21
YBX3-211ENST00000541351 C9orf152Q5JTZ5 239 aa7.49□□□□□ -1.21
YBX3-211ENST00000541351 MINOS1Q5TGZ0 78 aa7.49□□□□□ -1.21
YBX3-211ENST00000541351 STUMQ69YW2 141 aa7.49□□□□□ -1.21
YBX3-211ENST00000541351 REEP3Q6NUK4 255 aa7.49□□□□□ -1.21
YBX3-211ENST00000541351 DPY19L4Q7Z388 723 aa7.49□□□□□ -1.21
YBX3-211ENST00000541351 LHFPL4Q7Z7J7 247 aa7.49□□□□□ -1.21
YBX3-211ENST00000541351 SGPP2Q8IWX5 399 aa7.49□□□□□ -1.21
YBX3-211ENST00000541351 KIRREL3Q8IZU9 778 aa7.49□□□□□ -1.21
YBX3-211ENST00000541351 STMN2Q93045 179 aa7.49□□□□□ -1.21
YBX3-211ENST00000541351 ST6GALNAC6Q969X2 333 aa7.49□□□□□ -1.21
YBX3-211ENST00000541351 EME1Q96AY2 570 aa7.49□□□□□ -1.21
YBX3-211ENST00000541351 SLCO4A1Q96BD0 722 aa7.49□□□□□ -1.21
YBX3-211ENST00000541351 RAX2Q96IS3 184 aa7.49□□□□□ -1.21
YBX3-211ENST00000541351 FMO2Q99518 471 aa7.49□□□□□ -1.21
YBX3-211ENST00000541351 GON7Q9BXV9 100 aa7.49□□□□□ -1.21
YBX3-211ENST00000541351 OPA3Q9H6K4 179 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms