RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 RAP1BP61224 184 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 RAP1AP62834 184 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 KLRB1Q12918 225 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 SLC17A1Q14916 467 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 PPA1Q15181 289 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 ZNF74Q16587 644 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 TMEM128Q5BJH2 165 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 ATPAF1Q5TC12 328 aaPredicted RBP9.28□□□□□ -0.92
CHFR-219ENST00000541341 DCAF12L2Q5VW00 463 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 FCRLBQ6BAA4 426 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 MTFR2Q6P444 385 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 PRSS54Q6PEW0 395 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 FIGLAQ6QHK4 219 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 RNF44Q7L0R7 432 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 ZNF627Q7L945 461 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 TMED4Q7Z7H5 227 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 SYT9Q86SS6 491 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 PUSL1Q8N0Z8 303 aaKnown RBP9.28□□□□□ -0.92
CHFR-219ENST00000541341 ARHGEF39Q8N4T4 335 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 C10orf53Q8N6V4 93 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 ZNF614Q8N883 585 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 RGP1Q92546 391 aaPredicted RBP9.28□□□□□ -0.92
CHFR-219ENST00000541341 AQP10Q96PS8 301 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 PTDSS2Q9BVG9 487 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 MS4A7Q9GZW8 240 aaPredicted RBP9.28□□□□□ -0.92
CHFR-219ENST00000541341 SEC61A2Q9H9S3 476 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 PARP11Q9NR21 331 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 UBQLN4Q9NRR5 601 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 KCNG2Q9UJ96 466 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 TUBD1Q9UJT1 453 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 GTF2A1LQ9UNN4 478 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 PCSK5Q92824 1860 aa9.28□□□□□ -0.92
CHFR-219ENST00000541341 SPTA1P02549 2419 aa9.27□□□□□ -0.92
CHFR-219ENST00000541341 C5orf51A6NDU8 294 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 FAM74A7A6NL05 159 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 FIGNL2A6NMB9 653 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 CEACAM18A8MTB9 384 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 SULT2B1O00204 365 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 TGOLN2O43493 480 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 FADS1O60427 444 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 CTSVO60911 334 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 ST6GAL1P15907 406 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 HSD11B1P28845 292 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 SOX2P48431 317 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 DVL1P1P54792 670 aaPredicted RBP9.27□□□□□ -0.93
CHFR-219ENST00000541341 CLDN12P56749 244 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 SSTP61278 116 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 DCAF7P61962 342 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 PMPCAQ10713 525 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 RUNX2Q13950 521 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 DEFB134Q4QY38 66 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 FAM74A3Q4VXF1 159 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 DNLZQ5SXM8 178 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 FAM69BQ5VUD6 431 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 TMEM225Q6GV28 225 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 FIGNL1Q6PIW4 674 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 KIRREL2Q6UWL6 708 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 MDGA2Q7Z553 956 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 LDLRAD3Q86YD5 345 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 D2HGDHQ8N465 521 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 C19orf47Q8N9M1 422 aaKnown RBP9.27□□□□□ -0.93
CHFR-219ENST00000541341 RELL2Q8NC24 303 aaPredicted RBP9.27□□□□□ -0.93
CHFR-219ENST00000541341 CCDC54Q8NEL0 328 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 LFNGQ8NES3 379 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 OR1S2Q8NGQ3 325 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 OR6N2Q8NGY6 317 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 CT55Q8WUE5 264 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 NUDCD2Q8WVJ2 157 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 TCTN2Q96GX1 697 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 TMEM41AQ96HV5 264 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 SMIM8Q96KF7 97 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 PBDC1Q9BVG4 233 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 OR51M1Q9H341 326 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 SYNPO2LQ9H987 977 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 METTL1Q9UBP6 276 aaKnown RBP9.27□□□□□ -0.93
CHFR-219ENST00000541341 KCNE5Q9UJ90 142 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 EDARQ9UNE0 448 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 OR10H1Q9Y4A9 318 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 TEX15Q9BXT5 2789 aa9.27□□□□□ -0.93
CHFR-219ENST00000541341 CRYBG3Q68DQ2 2970 aa9.26□□□□□ -0.93
CHFR-219ENST00000541341 TMEM272A0A1B0GTI8 110 aa9.26□□□□□ -0.93
CHFR-219ENST00000541341 ARGFXA6NJG6 315 aa9.26□□□□□ -0.93
CHFR-219ENST00000541341 H3BMH7 237 aa9.26□□□□□ -0.93
CHFR-219ENST00000541341 MKRN2OSH3BPM6 223 aa9.26□□□□□ -0.93
CHFR-219ENST00000541341 CYR61O00622 381 aa9.26□□□□□ -0.93
CHFR-219ENST00000541341 UBE2CO00762 179 aa9.26□□□□□ -0.93
CHFR-219ENST00000541341 SCDO00767 359 aa9.26□□□□□ -0.93
CHFR-219ENST00000541341 AGFG2O95081 481 aa9.26□□□□□ -0.93
CHFR-219ENST00000541341 CST4P01036 141 aa9.26□□□□□ -0.93
CHFR-219ENST00000541341 IFNA17P01571 189 aa9.26□□□□□ -0.93
CHFR-219ENST00000541341 ASAH2BP0C7U1 165 aa9.26□□□□□ -0.93
CHFR-219ENST00000541341 RNF224P0DH78 156 aa9.26□□□□□ -0.93
CHFR-219ENST00000541341 GLP1RP43220 463 aa9.26□□□□□ -0.93
CHFR-219ENST00000541341 HSD11B2P80365 405 aa9.26□□□□□ -0.93
CHFR-219ENST00000541341 GLO1Q04760 184 aa9.26□□□□□ -0.93
CHFR-219ENST00000541341 MGAT2Q10469 447 aa9.26□□□□□ -0.93
CHFR-219ENST00000541341 ECH1Q13011 328 aa9.26□□□□□ -0.93
CHFR-219ENST00000541341 RHEBQ15382 184 aa9.26□□□□□ -0.93
CHFR-219ENST00000541341 PRR30Q53SZ7 412 aaPredicted RBP9.26□□□□□ -0.93
CHFR-219ENST00000541341 VAX1Q5SQQ9 334 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms