RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 NGBQ9NPG2 151 aa8.04□□□□□ -1.12
DDX55-208ENST00000541259 TBCCD1Q9NVR7 557 aa8.04□□□□□ -1.12
DDX55-208ENST00000541259 PTTG3PQ9NZH4 202 aa8.04□□□□□ -1.12
DDX55-208ENST00000541259 EIF3KQ9UBQ5 218 aaKnown RBP8.04□□□□□ -1.12
DDX55-208ENST00000541259 CHD3Q12873 2000 aaKnown RBP8.03□□□□□ -1.12
DDX55-208ENST00000541259 SHISA9B4DS77 424 aa8.03□□□□□ -1.12
DDX55-208ENST00000541259 LMX1BO60663 402 aa8.03□□□□□ -1.12
DDX55-208ENST00000541259 IGLV3-1P01715 115 aa8.03□□□□□ -1.12
DDX55-208ENST00000541259 CD3EP07766 207 aa8.03□□□□□ -1.12
DDX55-208ENST00000541259 COL8A1P27658 744 aa8.03□□□□□ -1.12
DDX55-208ENST00000541259 THBS4P35443 961 aa8.03□□□□□ -1.12
DDX55-208ENST00000541259 TGFBR2P37173 567 aa8.03□□□□□ -1.12
DDX55-208ENST00000541259 RGS6P49758 472 aa8.03□□□□□ -1.12
DDX55-208ENST00000541259 NR1H2P55055 460 aa8.03□□□□□ -1.12
DDX55-208ENST00000541259 TAS2R43P59537 309 aa8.03□□□□□ -1.12
DDX55-208ENST00000541259 PPP1CBP62140 327 aa8.03□□□□□ -1.12
DDX55-208ENST00000541259 RPS11P62280 158 aaKnown RBP eCLIP8.03□□□□□ -1.12
DDX55-208ENST00000541259 NKX6-1P78426 367 aaPredicted RBP8.03□□□□□ -1.12
DDX55-208ENST00000541259 ZNF92Q03936 586 aa8.03□□□□□ -1.12
DDX55-208ENST00000541259 SNTB2Q13425 540 aaKnown RBP8.03□□□□□ -1.12
DDX55-208ENST00000541259 INSL4Q14641 139 aa8.03□□□□□ -1.12
DDX55-208ENST00000541259 BEX5Q5H9J7 111 aa8.03□□□□□ -1.12
DDX55-208ENST00000541259 TMEM255AQ5JRV8 349 aa8.03□□□□□ -1.12
DDX55-208ENST00000541259 ADAM5Q6NVV9 412 aa8.03□□□□□ -1.12
DDX55-208ENST00000541259 VHLLQ6RSH7 139 aa8.03□□□□□ -1.12
DDX55-208ENST00000541259 SLC22A25Q6T423 547 aa8.03□□□□□ -1.12
DDX55-208ENST00000541259 ZNF676Q8N7Q3 588 aa8.03□□□□□ -1.12
DDX55-208ENST00000541259 KBTBD8Q8NFY9 601 aa8.03□□□□□ -1.12
DDX55-208ENST00000541259 OR52H1Q8NGJ2 320 aa8.03□□□□□ -1.12
DDX55-208ENST00000541259 OR51A4Q8NGJ6 313 aa8.03□□□□□ -1.12
DDX55-208ENST00000541259 OR5AK2Q8NH90 309 aa8.03□□□□□ -1.12
DDX55-208ENST00000541259 LILRB1Q8NHL6 650 aaPredicted RBP8.03□□□□□ -1.12
DDX55-208ENST00000541259 SLC25A40Q8TBP6 338 aa8.03□□□□□ -1.12
DDX55-208ENST00000541259 TMEM203Q969S6 136 aa8.03□□□□□ -1.12
DDX55-208ENST00000541259 SMIM19Q96E16 107 aa8.03□□□□□ -1.12
DDX55-208ENST00000541259 REEP6Q96HR9 211 aa8.03□□□□□ -1.12
DDX55-208ENST00000541259 KCNS3Q9BQ31 491 aa8.03□□□□□ -1.12
DDX55-208ENST00000541259 TMED9Q9BVK6 235 aa8.03□□□□□ -1.12
DDX55-208ENST00000541259 OR2J1Q9GZK6 312 aa8.03□□□□□ -1.12
DDX55-208ENST00000541259 OR10A2Q9H208 303 aa8.03□□□□□ -1.12
DDX55-208ENST00000541259 MOB1AQ9H8S9 216 aa8.03□□□□□ -1.12
DDX55-208ENST00000541259 VCX3AQ9NNX9 186 aa8.03□□□□□ -1.12
DDX55-208ENST00000541259 GPR84Q9NQS5 396 aa8.03□□□□□ -1.12
DDX55-208ENST00000541259 FZR1Q9UM11 496 aa8.03□□□□□ -1.12
DDX55-208ENST00000541259 SF3B6Q9Y3B4 125 aaKnown RBP8.03□□□□□ -1.12
DDX55-208ENST00000541259 ATP23Q9Y6H3 246 aa8.03□□□□□ -1.12
DDX55-208ENST00000541259 DSCAMO60469 2012 aa8.03□□□□□ -1.12
DDX55-208ENST00000541259 RAI1Q7Z5J4 1906 aaPredicted RBP8.03□□□□□ -1.12
DDX55-208ENST00000541259 LRBAP50851 2863 aa8.03□□□□□ -1.12
DDX55-208ENST00000541259 AKAP6Q13023 2319 aa8.02□□□□□ -1.13
DDX55-208ENST00000541259 DCHS2Q6V1P9 2916 aa8.02□□□□□ -1.13
DDX55-208ENST00000541259 A0A0U1RQV5 110 aa8.02□□□□□ -1.13
DDX55-208ENST00000541259 LOC107986453A0A1B0GWG9 222 aa8.02□□□□□ -1.13
DDX55-208ENST00000541259 A6NIN4 97 aa8.02□□□□□ -1.13
DDX55-208ENST00000541259 TMEM212A6NML5 194 aa8.02□□□□□ -1.13
DDX55-208ENST00000541259 E7EQL1 145 aa8.02□□□□□ -1.13
DDX55-208ENST00000541259 CCRL2O00421 344 aa8.02□□□□□ -1.13
DDX55-208ENST00000541259 ATE1O95260 518 aa8.02□□□□□ -1.13
DDX55-208ENST00000541259 MPV17P39210 176 aa8.02□□□□□ -1.13
DDX55-208ENST00000541259 PEX19P40855 299 aa8.02□□□□□ -1.13
DDX55-208ENST00000541259 RAD52P43351 418 aa8.02□□□□□ -1.13
DDX55-208ENST00000541259 RPL5P46777 297 aaKnown RBP8.02□□□□□ -1.13
DDX55-208ENST00000541259 FABP6P51161 128 aa8.02□□□□□ -1.13
DDX55-208ENST00000541259 FAM3AP98173 230 aa8.02□□□□□ -1.13
DDX55-208ENST00000541259 TNK1Q13470 666 aa8.02□□□□□ -1.13
DDX55-208ENST00000541259 GPR50Q13585 617 aa8.02□□□□□ -1.13
DDX55-208ENST00000541259 GK2Q14410 553 aaPredicted RBP8.02□□□□□ -1.13
DDX55-208ENST00000541259 DAZAP2Q15038 168 aaPredicted RBP8.02□□□□□ -1.13
DDX55-208ENST00000541259 ALKBH6Q3KRA9 238 aa8.02□□□□□ -1.13
DDX55-208ENST00000541259 ZNF544Q6NX49 715 aa8.02□□□□□ -1.13
DDX55-208ENST00000541259 LRP11Q86VZ4 500 aa8.02□□□□□ -1.13
DDX55-208ENST00000541259 COMMD2Q86X83 199 aa8.02□□□□□ -1.13
DDX55-208ENST00000541259 OR13F1Q8NGS4 319 aa8.02□□□□□ -1.13
DDX55-208ENST00000541259 HAVCR2Q8TDQ0 301 aa8.02□□□□□ -1.13
DDX55-208ENST00000541259 SPSB4Q96A44 273 aa8.02□□□□□ -1.13
DDX55-208ENST00000541259 ORAI1Q96D31 301 aa8.02□□□□□ -1.13
DDX55-208ENST00000541259 CMBLQ96DG6 245 aa8.02□□□□□ -1.13
DDX55-208ENST00000541259 YIPF6Q96EC8 236 aa8.02□□□□□ -1.13
DDX55-208ENST00000541259 MARS2Q96GW9 593 aaKnown RBP8.02□□□□□ -1.13
DDX55-208ENST00000541259 FAM71F1Q96KD3 344 aaPredicted RBP8.02□□□□□ -1.13
DDX55-208ENST00000541259 SPOCK3Q9BQ16 436 aa8.02□□□□□ -1.13
DDX55-208ENST00000541259 TMEM204Q9BSN7 226 aa8.02□□□□□ -1.13
DDX55-208ENST00000541259 COMMD4Q9H0A8 199 aa8.02□□□□□ -1.13
DDX55-208ENST00000541259 SP140LQ9H930 580 aa8.02□□□□□ -1.13
DDX55-208ENST00000541259 NDUFB11Q9NX14 153 aa8.02□□□□□ -1.13
DDX55-208ENST00000541259 ZNF281Q9Y2X9 895 aa8.02□□□□□ -1.13
DDX55-208ENST00000541259 NBPF19A0A087WUL8 3843 aa8.02□□□□□ -1.13
DDX55-208ENST00000541259 CACNA1DQ01668 2161 aa8.01□□□□□ -1.13
DDX55-208ENST00000541259 A0A1B0GVI7 797 aa8.01□□□□□ -1.13
DDX55-208ENST00000541259 A0A1W2PPK0 400 aa8.01□□□□□ -1.13
DDX55-208ENST00000541259 A0A1W2PPR1 153 aa8.01□□□□□ -1.13
DDX55-208ENST00000541259 ANKRD61A6NGH8 418 aa8.01□□□□□ -1.13
DDX55-208ENST00000541259 XRCC2O43543 280 aa8.01□□□□□ -1.13
DDX55-208ENST00000541259 SYT7O43581 403 aa8.01□□□□□ -1.13
DDX55-208ENST00000541259 ISG15P05161 165 aa8.01□□□□□ -1.13
DDX55-208ENST00000541259 CD1AP06126 327 aa8.01□□□□□ -1.13
DDX55-208ENST00000541259 UBCP0CG48 685 aaKnown RBP8.01□□□□□ -1.13
DDX55-208ENST00000541259 CD36P16671 472 aa8.01□□□□□ -1.13
DDX55-208ENST00000541259 ACHEP22303 614 aa8.01□□□□□ -1.13
DDX55-208ENST00000541259 CCL1P22362 96 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms