RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 DCAF16Q9NXF7 216 aa11.06□□□□□ -0.64
LTBR-208ENST00000541005 TREM2Q9NZC2 230 aa11.06□□□□□ -0.64
LTBR-208ENST00000541005 LPAR3Q9UBY5 353 aa11.06□□□□□ -0.64
LTBR-208ENST00000541005 PPP1R3CQ9UQK1 317 aa11.06□□□□□ -0.64
LTBR-208ENST00000541005 LRP12Q9Y561 859 aa11.06□□□□□ -0.64
LTBR-208ENST00000541005 NPTNQ9Y639 398 aa11.06□□□□□ -0.64
LTBR-208ENST00000541005 GGT3PA6NGU5 568 aa11.05□□□□□ -0.64
LTBR-208ENST00000541005 ACOD1A6NK06 481 aa11.05□□□□□ -0.64
LTBR-208ENST00000541005 PRR32B1ATL7 298 aa11.05□□□□□ -0.64
LTBR-208ENST00000541005 FAM157AC9JC47 383 aa11.05□□□□□ -0.64
LTBR-208ENST00000541005 F5H5P2 479 aa11.05□□□□□ -0.64
LTBR-208ENST00000541005 ZNF254O75437 659 aa11.05□□□□□ -0.64
LTBR-208ENST00000541005 FSTL3O95633 263 aa11.05□□□□□ -0.64
LTBR-208ENST00000541005 TGFAP01135 160 aa11.05□□□□□ -0.64
LTBR-208ENST00000541005 IGHV2-5P01817 119 aa11.05□□□□□ -0.64
LTBR-208ENST00000541005 DCTDP32321 178 aa11.05□□□□□ -0.64
LTBR-208ENST00000541005 DVL1P1P54792 670 aaPredicted RBP11.05□□□□□ -0.64
LTBR-208ENST00000541005 FAM3AP98173 230 aa11.05□□□□□ -0.64
LTBR-208ENST00000541005 MVKQ03426 396 aa11.05□□□□□ -0.64
LTBR-208ENST00000541005 MAB21L1Q13394 359 aa11.05□□□□□ -0.64
LTBR-208ENST00000541005 TMED1Q13445 227 aa11.05□□□□□ -0.64
LTBR-208ENST00000541005 OR8B8Q15620 311 aa11.05□□□□□ -0.64
LTBR-208ENST00000541005 TIGD6Q17RP2 521 aa11.05□□□□□ -0.64
LTBR-208ENST00000541005 TMEM155Q4W5P6 130 aa11.05□□□□□ -0.64
LTBR-208ENST00000541005 KCTD18Q6PI47 426 aaPredicted RBP11.05□□□□□ -0.64
LTBR-208ENST00000541005 LRRN1Q6UXK5 716 aa11.05□□□□□ -0.64
LTBR-208ENST00000541005 FAM57BQ71RH2 274 aa11.05□□□□□ -0.64
LTBR-208ENST00000541005 BCDIN3DQ7Z5W3 292 aaKnown RBP11.05□□□□□ -0.64
LTBR-208ENST00000541005 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.05□□□□□ -0.64
LTBR-208ENST00000541005 CBR4Q8N4T8 237 aa11.05□□□□□ -0.64
LTBR-208ENST00000541005 Q8TCH9 128 aa11.05□□□□□ -0.64
LTBR-208ENST00000541005 ERGIC1Q969X5 290 aa11.05□□□□□ -0.64
LTBR-208ENST00000541005 SGK3Q96BR1 496 aa11.05□□□□□ -0.64
LTBR-208ENST00000541005 REEP6Q96HR9 211 aa11.05□□□□□ -0.64
LTBR-208ENST00000541005 OR8B4Q96RC9 309 aa11.05□□□□□ -0.64
LTBR-208ENST00000541005 IL4I1Q96RQ9 567 aa11.05□□□□□ -0.64
LTBR-208ENST00000541005 ZNF665Q9H7R5 613 aa11.05□□□□□ -0.64
LTBR-208ENST00000541005 DNAJC27Q9NZQ0 273 aa11.05□□□□□ -0.64
LTBR-208ENST00000541005 ZNF319Q9P2F9 582 aa11.05□□□□□ -0.64
LTBR-208ENST00000541005 WARS2Q9UGM6 360 aaKnown RBP11.05□□□□□ -0.64
LTBR-208ENST00000541005 ZNF391Q9UJN7 358 aa11.05□□□□□ -0.64
LTBR-208ENST00000541005 COPS3Q9UNS2 423 aa11.05□□□□□ -0.64
LTBR-208ENST00000541005 ORC6Q9Y5N6 252 aa11.05□□□□□ -0.64
LTBR-208ENST00000541005 TMEM178BH3BS89 294 aa11.04□□□□□ -0.64
LTBR-208ENST00000541005 PHYHO14832 338 aa11.04□□□□□ -0.64
LTBR-208ENST00000541005 TBX1O43435 398 aa11.04□□□□□ -0.64
LTBR-208ENST00000541005 GMDSO60547 372 aa11.04□□□□□ -0.64
LTBR-208ENST00000541005 HLA-DPB1P04440 258 aa11.04□□□□□ -0.64
LTBR-208ENST00000541005 MSMBP08118 114 aa11.04□□□□□ -0.64
LTBR-208ENST00000541005 MRPL3P09001 348 aaKnown RBP11.04□□□□□ -0.64
LTBR-208ENST00000541005 CA6P23280 308 aa11.04□□□□□ -0.64
LTBR-208ENST00000541005 HTR1FP30939 366 aa11.04□□□□□ -0.64
LTBR-208ENST00000541005 CDC42P60953 191 aa11.04□□□□□ -0.64
LTBR-208ENST00000541005 BTG1P62324 171 aa11.04□□□□□ -0.64
LTBR-208ENST00000541005 POU4F2Q12837 409 aa11.04□□□□□ -0.64
LTBR-208ENST00000541005 CHRFAM7AQ494W8 412 aa11.04□□□□□ -0.64
LTBR-208ENST00000541005 SLC25A30Q5SVS4 291 aa11.04□□□□□ -0.64
LTBR-208ENST00000541005 KRT77Q7Z794 578 aa11.04□□□□□ -0.64
LTBR-208ENST00000541005 ZNF679Q8IYX0 411 aa11.04□□□□□ -0.64
LTBR-208ENST00000541005 SPERTQ8NA61 448 aa11.04□□□□□ -0.64
LTBR-208ENST00000541005 PLPP7Q8NBV4 271 aa11.04□□□□□ -0.64
LTBR-208ENST00000541005 TRUB1Q8WWH5 349 aaKnown RBP11.04□□□□□ -0.64
LTBR-208ENST00000541005 ITFG2Q969R8 447 aa11.04□□□□□ -0.64
LTBR-208ENST00000541005 GAL3ST1Q99999 423 aa11.04□□□□□ -0.64
LTBR-208ENST00000541005 ADAT1Q9BUB4 502 aaKnown RBP11.04□□□□□ -0.64
LTBR-208ENST00000541005 C9orf16Q9BUW7 83 aa11.04□□□□□ -0.64
LTBR-208ENST00000541005 MROQ9BYG7 248 aa11.04□□□□□ -0.64
LTBR-208ENST00000541005 CLN6Q9NWW5 311 aa11.04□□□□□ -0.64
LTBR-208ENST00000541005 FAM206AQ9NX38 181 aa11.04□□□□□ -0.64
LTBR-208ENST00000541005 H2AFY2Q9P0M6 372 aaPredicted RBP11.04□□□□□ -0.64
LTBR-208ENST00000541005 MXRA5Q9NR99 2828 aa11.03□□□□□ -0.64
LTBR-208ENST00000541005 TRAV20A0A0B4J274 112 aa11.03□□□□□ -0.64
LTBR-208ENST00000541005 A0A0U1RQV5 110 aa11.03□□□□□ -0.64
LTBR-208ENST00000541005 SBK2P0C263 348 aa11.03□□□□□ -0.64
LTBR-208ENST00000541005 FAM157CP0CG43 387 aa11.03□□□□□ -0.64
LTBR-208ENST00000541005 PCMT1P22061 227 aa11.03□□□□□ -0.64
LTBR-208ENST00000541005 MDH2P40926 338 aaKnown RBP11.03□□□□□ -0.64
LTBR-208ENST00000541005 GSK3AP49840 483 aa11.03□□□□□ -0.64
LTBR-208ENST00000541005 HCCSP53701 268 aa11.03□□□□□ -0.64
LTBR-208ENST00000541005 EGR3Q06889 387 aa11.03□□□□□ -0.64
LTBR-208ENST00000541005 HNRNPA0Q13151 305 aaKnown RBP11.03□□□□□ -0.64
LTBR-208ENST00000541005 ZMYND11Q15326 602 aa11.03□□□□□ -0.64
LTBR-208ENST00000541005 OR8G1Q15617 311 aa11.03□□□□□ -0.64
LTBR-208ENST00000541005 SNCBQ16143 134 aa11.03□□□□□ -0.64
LTBR-208ENST00000541005 FAM120AOSQ5T036 256 aa11.03□□□□□ -0.64
LTBR-208ENST00000541005 KRT74Q7RTS7 529 aa11.03□□□□□ -0.64
LTBR-208ENST00000541005 MOGAT3Q86VF5 341 aa11.03□□□□□ -0.64
LTBR-208ENST00000541005 GLCCI1Q86VQ1 547 aa11.03□□□□□ -0.64
LTBR-208ENST00000541005 LRRC28Q86X40 367 aaPredicted RBP11.03□□□□□ -0.64
LTBR-208ENST00000541005 PRIMA1Q86XR5 153 aa11.03□□□□□ -0.64
LTBR-208ENST00000541005 SLC35F2Q8IXU6 374 aa11.03□□□□□ -0.64
LTBR-208ENST00000541005 SPICQ8N5J4 248 aa11.03□□□□□ -0.64
LTBR-208ENST00000541005 RFLNBQ8N5W9 214 aa11.03□□□□□ -0.64
LTBR-208ENST00000541005 CSNK2A3Q8NEV1 391 aa11.03□□□□□ -0.64
LTBR-208ENST00000541005 OR8B12Q8NGG6 310 aa11.03□□□□□ -0.64
LTBR-208ENST00000541005 OR51F2Q8NH61 342 aa11.03□□□□□ -0.64
LTBR-208ENST00000541005 FAM81AQ8TBF8 368 aa11.03□□□□□ -0.64
LTBR-208ENST00000541005 TMEM186Q96B77 213 aa11.03□□□□□ -0.64
LTBR-208ENST00000541005 PGAM5Q96HS1 289 aa11.03□□□□□ -0.64
LTBR-208ENST00000541005 MBOAT4Q96T53 435 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms