RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 Q9N2J8 555 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 DMRT3Q9NQL9 472 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 MBNL1Q9NR56 388 aaKnown RBP8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 GPR173Q9NS66 373 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 SLC2A8Q9NY64 477 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 ZDHHC3Q9NYG2 299 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 HAO2Q9NYQ3 351 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 LUZP4Q9P127 313 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 SIT1Q9Y3P8 196 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 BDP1A6H8Y1 2624 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 A0A087WWC5 75 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 RAB27BO00194 218 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 SCAF4O95104 1147 aaKnown RBP8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 ZFPL1O95159 310 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 OR5AC1P0C628 307 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 CD37P11049 281 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 NAA10P41227 235 aaPredicted RBP8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 GPR1P46091 355 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 SLC37A1P57057 533 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 FUT5Q11128 374 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 LEG1Q6P5S2 330 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 THSD4Q6ZMP0 1018 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 FAM219AQ8IW50 185 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 ZNF101Q8IZC7 436 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 ADPRHL1Q8NDY3 354 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 TMEM104Q8NE00 496 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 OR4S1Q8NGB4 309 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 SUN3Q8TAQ9 357 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 RLN3Q8WXF3 142 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 CLDN23Q96B33 292 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 ZMYND19Q96E35 227 aaPredicted RBP8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 RCC1LQ96I51 464 aaKnown RBP8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 CNN2Q99439 309 aaKnown RBP8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 ARHGDIGQ99819 225 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 TPSD1Q9BZJ3 242 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 BCL2L10Q9HD36 194 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 SLC13A4Q9UKG4 626 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 CDV3Q9UKY7 258 aaKnown RBP8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 TRPM6Q9BX84 2022 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 ZNF736B4DX44 427 aaPredicted RBP8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 TRDCB7Z8K6 153 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 H3BQ15 152 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 TAAR5O14804 337 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 SLC31A1O15431 190 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 EFSO43281 561 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 HCRTR2O43614 444 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 SRPX2O60687 465 aaPredicted RBP8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 DUS4LO95620 317 aaKnown RBP8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 CST4P01036 141 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 MAS1P04201 325 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 IL6RP08887 468 aaPredicted RBP8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 CST2P09228 141 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 HOXC12P31275 282 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 GALNSP34059 522 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 SOX2P48431 317 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 NANOS3P60323 173 aaKnown RBP8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 RPS21P63220 83 aaKnown RBP8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 DPTQ07507 201 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 HAGHQ16775 308 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 KIRREL2Q6UWL6 708 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 ZNF705AQ6ZN79 300 aaPredicted RBP8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 SLCO4C1Q6ZQN7 724 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 GALNTL5Q7Z4T8 443 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 MRPL52Q86TS9 123 aaKnown RBP8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 SUMF2Q8NBJ7 301 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 ADAD2Q8NCV1 583 aaKnown RBP8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 PLPP5Q8NEB5 264 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 SLC24A4Q8NFF2 622 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 OR52N4Q8NGI2 321 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 MFSD8Q8NHS3 518 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 GLYATL1Q969I3 302 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 SLC41A3Q96GZ6 507 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 CCDC74BQ96LY2 380 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 ALKBH3Q96Q83 286 aaPredicted RBP8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 INTS14Q96SY0 518 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 SERINC1Q9NRX5 453 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 OR52A1Q9UKL2 312 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 CYP8B1Q9UNU6 501 aa8.47□□□□□ -1.05
CTNNA1-243ENST00000540387 USP34Q70CQ2 3546 aa8.46□□□□□ -1.05
CTNNA1-243ENST00000540387 HEATR5AQ86XA9 2040 aa8.46□□□□□ -1.05
CTNNA1-243ENST00000540387 RIIAD1A6NNX1 92 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 HSBP1L1C9JCN9 74 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 CYB5AP00167 134 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 ERCC1P07992 297 aaPredicted RBP8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 OR2T7P0C7T2 308 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 AKR1C4P17516 323 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 UBE2KP61086 200 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 CCSMST1Q4G0I0 132 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 C1orf194Q5T5A4 169 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 AADACL3Q5VUY0 350 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 LEMD1Q68G75 181 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 ABLIM2Q6H8Q1 611 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 SLC25A24Q6NUK1 477 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 VHLLQ6RSH7 139 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 MED25Q71SY5 747 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 SSX7Q7RTT5 188 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 OR2L13Q8N349 312 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 OR2T27Q8NH04 317 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 OR51F2Q8NH61 342 aa8.46□□□□□ -1.06
CTNNA1-243ENST00000540387 MRGPRFQ96AM1 343 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms