RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 CCL4L1Q8NHW4 92 aa11.69□□□□□ -0.54
DNMT1-203ENST00000540357 PBX4Q9BYU1 374 aa11.69□□□□□ -0.54
DNMT1-203ENST00000540357 PIAS3Q9Y6X2 628 aa11.69□□□□□ -0.54
DNMT1-203ENST00000540357 WDR90Q96KV7 1748 aa11.69□□□□□ -0.54
DNMT1-203ENST00000540357 OR6C76A6NM76 312 aa11.69□□□□□ -0.54
DNMT1-203ENST00000540357 C9J4A7 227 aa11.69□□□□□ -0.54
DNMT1-203ENST00000540357 ST6GAL1P15907 406 aa11.69□□□□□ -0.54
DNMT1-203ENST00000540357 RPS4Y1P22090 263 aaKnown RBP11.69□□□□□ -0.54
DNMT1-203ENST00000540357 MOGAT1Q96PD6 335 aa11.69□□□□□ -0.54
DNMT1-203ENST00000540357 SARGQ9BW04 601 aa11.69□□□□□ -0.54
DNMT1-203ENST00000540357 NXT1Q9UKK6 140 aaKnown RBP11.69□□□□□ -0.54
DNMT1-203ENST00000540357 STMND1H3BQB6 276 aa11.69□□□□□ -0.54
DNMT1-203ENST00000540357 CCNOP22674 350 aa11.69□□□□□ -0.54
DNMT1-203ENST00000540357 PSG6Q00889 435 aa11.69□□□□□ -0.54
DNMT1-203ENST00000540357 PRTGQ2VWP7 1150 aa11.69□□□□□ -0.54
DNMT1-203ENST00000540357 BTF3L4Q96K17 158 aa11.69□□□□□ -0.54
DNMT1-203ENST00000540357 CDCA3Q99618 268 aaPredicted RBP11.69□□□□□ -0.54
DNMT1-203ENST00000540357 SLC35B3Q9H1N7 401 aa11.69□□□□□ -0.54
DNMT1-203ENST00000540357 GPR84Q9NQS5 396 aa11.69□□□□□ -0.54
DNMT1-203ENST00000540357 ALKBH4Q9NXW9 302 aa11.69□□□□□ -0.54
DNMT1-203ENST00000540357 ZNF724A8MTY0 619 aa11.68□□□□□ -0.54
DNMT1-203ENST00000540357 GPANK1O95872 356 aa11.68□□□□□ -0.54
DNMT1-203ENST00000540357 NKX2-1P43699 371 aaPredicted RBP11.68□□□□□ -0.54
DNMT1-203ENST00000540357 MFAP5Q13361 173 aa11.68□□□□□ -0.54
DNMT1-203ENST00000540357 CEBPEQ15744 281 aa11.68□□□□□ -0.54
DNMT1-203ENST00000540357 PHLDA2Q53GA4 152 aa11.68□□□□□ -0.54
DNMT1-203ENST00000540357 BEND4Q6ZU67 534 aa11.68□□□□□ -0.54
DNMT1-203ENST00000540357 SLC36A1Q7Z2H8 476 aa11.68□□□□□ -0.54
DNMT1-203ENST00000540357 ATG4DQ86TL0 474 aaPredicted RBP11.68□□□□□ -0.54
DNMT1-203ENST00000540357 LDLRAD3Q86YD5 345 aa11.68□□□□□ -0.54
DNMT1-203ENST00000540357 MRPL41Q8IXM3 137 aaKnown RBP11.68□□□□□ -0.54
DNMT1-203ENST00000540357 ST8SIA1Q92185 356 aa11.68□□□□□ -0.54
DNMT1-203ENST00000540357 CMBLQ96DG6 245 aa11.68□□□□□ -0.54
DNMT1-203ENST00000540357 OCSTAMPQ9BR26 566 aa11.68□□□□□ -0.54
DNMT1-203ENST00000540357 TGIF2Q9GZN2 237 aa11.68□□□□□ -0.54
DNMT1-203ENST00000540357 NKX2-4Q9H2Z4 354 aa11.68□□□□□ -0.54
DNMT1-203ENST00000540357 PARP11Q9NR21 331 aa11.68□□□□□ -0.54
DNMT1-203ENST00000540357 SRPK3Q9UPE1 567 aa11.68□□□□□ -0.54
DNMT1-203ENST00000540357 VSIG4Q9Y279 399 aa11.68□□□□□ -0.54
DNMT1-203ENST00000540357 TMEM184BQ9Y519 407 aaPredicted RBP11.68□□□□□ -0.54
DNMT1-203ENST00000540357 LOC102725191A0A1B0GVB3 256 aa11.68□□□□□ -0.54
DNMT1-203ENST00000540357 FAM109BQ6ICB4 259 aaPredicted RBP11.68□□□□□ -0.54
DNMT1-203ENST00000540357 ZNF610Q8N9Z0 462 aa11.68□□□□□ -0.54
DNMT1-203ENST00000540357 FAM174AQ8TBP5 190 aa11.68□□□□□ -0.54
DNMT1-203ENST00000540357 NKX3-1Q99801 234 aaPredicted RBP11.68□□□□□ -0.54
DNMT1-203ENST00000540357 NXF5Q9H1B4 397 aaKnown RBP11.68□□□□□ -0.54
DNMT1-203ENST00000540357 CNTD2Q9H8S5 307 aa11.68□□□□□ -0.54
DNMT1-203ENST00000540357 ZNF638Q14966 1978 aaKnown RBP11.68□□□□□ -0.54
DNMT1-203ENST00000540357 J3QRE1 110 aa11.68□□□□□ -0.54
DNMT1-203ENST00000540357 RPS18P62269 152 aaKnown RBP11.68□□□□□ -0.54
DNMT1-203ENST00000540357 CATSPERDQ86XM0 798 aa11.68□□□□□ -0.54
DNMT1-203ENST00000540357 GJC3Q8NFK1 279 aa11.68□□□□□ -0.54
DNMT1-203ENST00000540357 OR4D6Q8NGJ1 314 aa11.68□□□□□ -0.54
DNMT1-203ENST00000540357 OR10AC1Q8NH08 325 aa11.68□□□□□ -0.54
DNMT1-203ENST00000540357 PHOSPHO2Q8TCD6 241 aa11.68□□□□□ -0.54
DNMT1-203ENST00000540357 BADQ92934 168 aa11.68□□□□□ -0.54
DNMT1-203ENST00000540357 NRSN2Q9GZP1 204 aa11.68□□□□□ -0.54
DNMT1-203ENST00000540357 PIGLQ9Y2B2 252 aa11.68□□□□□ -0.54
DNMT1-203ENST00000540357 ZNF705FA8MVS1 300 aaPredicted RBP11.68□□□□□ -0.54
DNMT1-203ENST00000540357 H0Y8X5 98 aa11.68□□□□□ -0.54
DNMT1-203ENST00000540357 ZNF705DP0CH99 300 aaPredicted RBP11.68□□□□□ -0.54
DNMT1-203ENST00000540357 ZNF705BP0CI00 300 aaPredicted RBP11.68□□□□□ -0.54
DNMT1-203ENST00000540357 SLC2A1P11166 492 aa11.68□□□□□ -0.54
DNMT1-203ENST00000540357 MRPS21P82921 87 aaKnown RBP11.68□□□□□ -0.54
DNMT1-203ENST00000540357 RPL7L1Q6DKI1 246 aaKnown RBP11.68□□□□□ -0.54
DNMT1-203ENST00000540357 PLXDC2Q6UX71 529 aa11.68□□□□□ -0.54
DNMT1-203ENST00000540357 GVQW1Q8N7I0 195 aa11.68□□□□□ -0.54
DNMT1-203ENST00000540357 NINJ1Q92982 152 aa11.68□□□□□ -0.54
DNMT1-203ENST00000540357 TVP23CQ96ET8 276 aa11.68□□□□□ -0.54
DNMT1-203ENST00000540357 EDEM2Q9BV94 578 aa11.68□□□□□ -0.54
DNMT1-203ENST00000540357 MRPS2Q9Y399 296 aaKnown RBP11.68□□□□□ -0.54
DNMT1-203ENST00000540357 MGAMO43451 1857 aa11.67□□□□□ -0.54
DNMT1-203ENST00000540357 TLCD2A6NGC4 264 aa11.67□□□□□ -0.54
DNMT1-203ENST00000540357 CD8AP01732 235 aa11.67□□□□□ -0.54
DNMT1-203ENST00000540357 THY1P04216 161 aa11.67□□□□□ -0.54
DNMT1-203ENST00000540357 HPNP05981 417 aa11.67□□□□□ -0.54
DNMT1-203ENST00000540357 MSX1P28360 303 aa11.67□□□□□ -0.54
DNMT1-203ENST00000540357 PNLIPRP2P54317 469 aa11.67□□□□□ -0.54
DNMT1-203ENST00000540357 PRSS41Q7RTY9 318 aa11.67□□□□□ -0.54
DNMT1-203ENST00000540357 ZAR1Q86SH2 424 aa11.67□□□□□ -0.54
DNMT1-203ENST00000540357 RBMXL1Q96E39 390 aaKnown RBP11.67□□□□□ -0.54
DNMT1-203ENST00000540357 TOE1Q96GM8 510 aaKnown RBP11.67□□□□□ -0.54
DNMT1-203ENST00000540357 SPACA5Q96QH8 159 aa11.67□□□□□ -0.54
DNMT1-203ENST00000540357 GPX7Q96SL4 187 aaPredicted RBP11.67□□□□□ -0.54
DNMT1-203ENST00000540357 NRIP2Q9BQI9 281 aa11.67□□□□□ -0.54
DNMT1-203ENST00000540357 MRPS17Q9Y2R5 130 aaKnown RBP11.67□□□□□ -0.54
DNMT1-203ENST00000540357 MYLKQ15746 1914 aa11.67□□□□□ -0.54
DNMT1-203ENST00000540357 CCDC88CQ9P219 2028 aa11.67□□□□□ -0.54
DNMT1-203ENST00000540357 TRBV5-7A0A0A0MS05 114 aa11.67□□□□□ -0.54
DNMT1-203ENST00000540357 AWAT1Q58HT5 328 aa11.67□□□□□ -0.54
DNMT1-203ENST00000540357 PLCXD3Q63HM9 321 aa11.67□□□□□ -0.54
DNMT1-203ENST00000540357 OR5L1Q8NGL2 311 aa11.67□□□□□ -0.54
DNMT1-203ENST00000540357 PIGTQ969N2 578 aa11.67□□□□□ -0.54
DNMT1-203ENST00000540357 SMAD2Q15796 467 aaKnown RBP11.67□□□□□ -0.54
DNMT1-203ENST00000540357 PCK2Q16822 640 aa11.67□□□□□ -0.54
DNMT1-203ENST00000540357 KIAA0895LQ68EN5 471 aa11.67□□□□□ -0.54
DNMT1-203ENST00000540357 FAM24BQ8N5W8 94 aa11.67□□□□□ -0.54
DNMT1-203ENST00000540357 ZPLD1Q8TCW7 415 aa11.67□□□□□ -0.54
DNMT1-203ENST00000540357 ASB5Q8WWX0 329 aa11.67□□□□□ -0.54
DNMT1-203ENST00000540357 ANKRD9Q96BM1 317 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms