RNA–Protein interactions for RNA: ENST00000539563.5

LSAMP-207, Transcript of limbic system associated membrane protein, humanhuman

TSL 3 BASIC

Gene LSAMP, Length 8,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-207ENST00000539563 B9D1Q9UPM9 204 aa5.86□□□□□ -1.47
LSAMP-207ENST00000539563 PIKFYVEQ9Y2I7 2098 aa5.86□□□□□ -1.47
LSAMP-207ENST00000539563 CXCL13O43927 109 aa5.86□□□□□ -1.47
LSAMP-207ENST00000539563 CTRB1P17538 263 aa5.86□□□□□ -1.47
LSAMP-207ENST00000539563 CCR2P41597 374 aa5.86□□□□□ -1.47
LSAMP-207ENST00000539563 GNB2P62879 340 aa5.86□□□□□ -1.47
LSAMP-207ENST00000539563 PHYHD1Q5SRE7 291 aa5.86□□□□□ -1.47
LSAMP-207ENST00000539563 CTRB2Q6GPI1 263 aa5.86□□□□□ -1.47
LSAMP-207ENST00000539563 KIRREL2Q6UWL6 708 aa5.86□□□□□ -1.47
LSAMP-207ENST00000539563 PTOV1Q86YD1 416 aa5.86□□□□□ -1.47
LSAMP-207ENST00000539563 OR2AK2Q8NG84 335 aa5.86□□□□□ -1.47
LSAMP-207ENST00000539563 MYEOVQ96EZ4 313 aa5.86□□□□□ -1.47
LSAMP-207ENST00000539563 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.86□□□□□ -1.47
LSAMP-207ENST00000539563 IGLV3-16A0A075B6K0 115 aa5.86□□□□□ -1.47
LSAMP-207ENST00000539563 SPTY2D1-AS1A0A0U1RR47 76 aa5.86□□□□□ -1.47
LSAMP-207ENST00000539563 TGOLN2O43493 480 aa5.86□□□□□ -1.47
LSAMP-207ENST00000539563 GALR2O43603 387 aaPredicted RBP5.86□□□□□ -1.47
LSAMP-207ENST00000539563 CT45A10P0DMU9 189 aa5.86□□□□□ -1.47
LSAMP-207ENST00000539563 AGFG1P52594 562 aaKnown RBP5.86□□□□□ -1.47
LSAMP-207ENST00000539563 BPIFB3P59826 476 aa5.86□□□□□ -1.47
LSAMP-207ENST00000539563 CDC20Q12834 499 aa5.86□□□□□ -1.47
LSAMP-207ENST00000539563 MFSD4AQ8N468 514 aa5.86□□□□□ -1.47
LSAMP-207ENST00000539563 TP53I13Q8NBR0 393 aaPredicted RBP5.86□□□□□ -1.47
LSAMP-207ENST00000539563 FGF14Q92915 247 aa5.86□□□□□ -1.47
LSAMP-207ENST00000539563 MED9Q9NWA0 146 aa5.86□□□□□ -1.47
LSAMP-207ENST00000539563 ARID2Q68CP9 1835 aa5.86□□□□□ -1.47
LSAMP-207ENST00000539563 AQP7O14520 342 aa5.86□□□□□ -1.47
LSAMP-207ENST00000539563 IGFBP1P08833 259 aaPredicted RBP5.86□□□□□ -1.47
LSAMP-207ENST00000539563 OR4E1P0C645 316 aa5.86□□□□□ -1.47
LSAMP-207ENST00000539563 RPA2P15927 270 aa5.86□□□□□ -1.47
LSAMP-207ENST00000539563 BMI1P35226 326 aa5.86□□□□□ -1.47
LSAMP-207ENST00000539563 HRH1P35367 487 aa5.86□□□□□ -1.47
LSAMP-207ENST00000539563 PIGPP57054 158 aa5.86□□□□□ -1.47
LSAMP-207ENST00000539563 DUSP2Q05923 314 aa5.86□□□□□ -1.47
LSAMP-207ENST00000539563 LYG2Q86SG7 212 aa5.86□□□□□ -1.47
LSAMP-207ENST00000539563 ZNF784Q8NCA9 323 aaPredicted RBP5.86□□□□□ -1.47
LSAMP-207ENST00000539563 OR10Z1Q8NGY1 313 aa5.86□□□□□ -1.47
LSAMP-207ENST00000539563 ISG20L2Q9H9L3 353 aaKnown RBP5.86□□□□□ -1.47
LSAMP-207ENST00000539563 SLCO1C1Q9NYB5 712 aa5.86□□□□□ -1.47
LSAMP-207ENST00000539563 KCNE1BA0A087WTH5 132 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 A0A096LPE4 126 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 A0A1W2PPZ6 126 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 TUBAL3A6NHL2 446 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 PPP5D1E7EU14 171 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 SIRPB1O00241 398 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 GPR37O15354 613 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 TBX19O60806 448 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 MGMTP16455 207 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 ELLP55199 621 aaPredicted RBP5.85□□□□□ -1.47
LSAMP-207ENST00000539563 DEFA6Q01524 100 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 TIGITQ495A1 244 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 OR10R2Q8NGX6 335 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 APOBEC3DQ96AK3 386 aaPredicted RBP5.85□□□□□ -1.47
LSAMP-207ENST00000539563 SPACA9Q96E40 222 aaPredicted RBP5.85□□□□□ -1.47
LSAMP-207ENST00000539563 SLC17A5Q9NRA2 495 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 SLC35D1Q9NTN3 355 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 CLEC1BQ9P126 229 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 CCSO14618 274 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 FCMRO60667 390 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 GABRG2P18507 467 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 GFERP55789 205 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 RPS16P62249 146 aaKnown RBP5.85□□□□□ -1.47
LSAMP-207ENST00000539563 SIGLEC11Q96RL6 698 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 UQCC2Q9BRT2 126 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 TPPP3Q9BW30 176 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 CHST6Q9GZX3 395 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 TMEM30AQ9NV96 361 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 PSENENQ9NZ42 101 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 ENDOGQ14249 297 aaKnown RBP5.85□□□□□ -1.47
LSAMP-207ENST00000539563 SSPNQ14714 243 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 PLA1AQ53H76 456 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 TMPRSS11FQ6ZWK6 438 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 CDH26Q8IXH8 852 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 HSD17B11Q8NBQ5 300 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 MAFAQ8NHW3 353 aaPredicted RBP5.85□□□□□ -1.47
LSAMP-207ENST00000539563 NKX6-2Q9C056 277 aaPredicted RBP5.85□□□□□ -1.47
LSAMP-207ENST00000539563 C12orf10Q9HB07 376 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 ATP6V1G2-DDX39BF2Z307 99 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 ARPC3O15145 178 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 LINC01565O15544 149 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 OR13C7P0DN81 318 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 EPXP11678 715 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 WFDC8Q8IUA0 241 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 PELI1Q96FA3 418 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 C1QTNF6Q9BXI9 259 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 ST3GAL6Q9Y274 331 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 ASB1Q9Y576 335 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 DHHO43323 396 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 LRP3O75074 770 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 PIAS2O75928 621 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 PRR35P0CG20 571 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 TMEM11P17152 192 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 HAAOP46952 286 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 NDUFA6P56556 154 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 DGCR2P98153 550 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 CNRIP1Q96F85 164 aaPredicted RBP5.85□□□□□ -1.47
LSAMP-207ENST00000539563 POM121L2Q96KW2 1035 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 OCIAD1Q9NX40 245 aa5.85□□□□□ -1.47
LSAMP-207ENST00000539563 WSB2Q9NYS7 404 aaPredicted RBP5.85□□□□□ -1.47
LSAMP-207ENST00000539563 PATJQ8NI35 1801 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms