RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 CADM4Q8NFZ8 388 aa11.17□□□□□ -0.62
SFSWAP-208ENST00000539506 ASB17Q8WXJ9 295 aa11.17□□□□□ -0.62
SFSWAP-208ENST00000539506 FGGYQ96C11 551 aa11.17□□□□□ -0.62
SFSWAP-208ENST00000539506 CNTNAP3BQ96NU0 1288 aa11.17□□□□□ -0.62
SFSWAP-208ENST00000539506 FN3KRPQ9HA64 309 aa11.17□□□□□ -0.62
SFSWAP-208ENST00000539506 G6PC2Q9NQR9 355 aa11.17□□□□□ -0.62
SFSWAP-208ENST00000539506 PRMT8Q9NR22 394 aaPredicted RBP11.17□□□□□ -0.62
SFSWAP-208ENST00000539506 MED29Q9NX70 200 aa11.17□□□□□ -0.62
SFSWAP-208ENST00000539506 OR5AC2Q9NZP5 309 aa11.17□□□□□ -0.62
SFSWAP-208ENST00000539506 A0A1W2PPE3 182 aa11.16□□□□□ -0.62
SFSWAP-208ENST00000539506 TXNL1O43396 289 aa11.16□□□□□ -0.62
SFSWAP-208ENST00000539506 EFNA2O43921 213 aa11.16□□□□□ -0.62
SFSWAP-208ENST00000539506 PPT1P50897 306 aa11.16□□□□□ -0.62
SFSWAP-208ENST00000539506 SCAND1P57086 179 aa11.16□□□□□ -0.62
SFSWAP-208ENST00000539506 SLC26A5P58743 744 aa11.16□□□□□ -0.62
SFSWAP-208ENST00000539506 PLXDC1Q8IUK5 500 aa11.16□□□□□ -0.62
SFSWAP-208ENST00000539506 ZSCAN4Q8NAM6 433 aaPredicted RBP11.16□□□□□ -0.62
SFSWAP-208ENST00000539506 OR4K17Q8NGC6 315 aa11.16□□□□□ -0.62
SFSWAP-208ENST00000539506 OR52N5Q8NH56 324 aa11.16□□□□□ -0.62
SFSWAP-208ENST00000539506 ST7LQ8TDW4 575 aa11.16□□□□□ -0.62
SFSWAP-208ENST00000539506 SFT2D1Q8WV19 159 aa11.16□□□□□ -0.62
SFSWAP-208ENST00000539506 SOX7Q9BT81 388 aa11.16□□□□□ -0.62
SFSWAP-208ENST00000539506 IER2Q9BTL4 223 aa11.16□□□□□ -0.62
SFSWAP-208ENST00000539506 BANF2Q9H503 90 aa11.16□□□□□ -0.62
SFSWAP-208ENST00000539506 SEMA5BQ9P283 1151 aa11.16□□□□□ -0.62
SFSWAP-208ENST00000539506 SUSD2Q9UGT4 822 aa11.16□□□□□ -0.62
SFSWAP-208ENST00000539506 RHBDD3Q9Y3P4 386 aa11.16□□□□□ -0.62
SFSWAP-208ENST00000539506 HSPB2A8KAH6 182 aa11.16□□□□□ -0.62
SFSWAP-208ENST00000539506 OR2F2O95006 317 aa11.16□□□□□ -0.62
SFSWAP-208ENST00000539506 IFNA6P05013 189 aa11.16□□□□□ -0.62
SFSWAP-208ENST00000539506 HOXB5P09067 269 aa11.16□□□□□ -0.62
SFSWAP-208ENST00000539506 MUC1P15941 1255 aaPredicted RBP11.16□□□□□ -0.62
SFSWAP-208ENST00000539506 CD80P33681 288 aa11.16□□□□□ -0.62
SFSWAP-208ENST00000539506 ARRB1P49407 418 aaPredicted RBP11.16□□□□□ -0.62
SFSWAP-208ENST00000539506 HOXA1P49639 335 aaPredicted RBP11.16□□□□□ -0.62
SFSWAP-208ENST00000539506 OR2F1Q13607 317 aa11.16□□□□□ -0.62
SFSWAP-208ENST00000539506 HSPB2Q16082 182 aa11.16□□□□□ -0.62
SFSWAP-208ENST00000539506 ZNF574Q6ZN55 896 aaPredicted RBP11.16□□□□□ -0.62
SFSWAP-208ENST00000539506 SLC26A10Q8NG04 563 aa11.16□□□□□ -0.62
SFSWAP-208ENST00000539506 ACKR4Q9NPB9 350 aa11.16□□□□□ -0.62
SFSWAP-208ENST00000539506 CKLFQ9UBR5 152 aa11.16□□□□□ -0.62
SFSWAP-208ENST00000539506 NDRG3Q9UGV2 375 aa11.16□□□□□ -0.62
SFSWAP-208ENST00000539506 VDAC3Q9Y277 283 aa11.16□□□□□ -0.62
SFSWAP-208ENST00000539506 FRYQ5TBA9 3013 aa11.16□□□□□ -0.62
SFSWAP-208ENST00000539506 ADAMTS20P59510 1910 aa11.16□□□□□ -0.62
SFSWAP-208ENST00000539506 PRSS44E7EML9 344 aa11.15□□□□□ -0.62
SFSWAP-208ENST00000539506 ACAA1P09110 424 aaPredicted RBP11.15□□□□□ -0.62
SFSWAP-208ENST00000539506 MPPED2Q15777 294 aa11.15□□□□□ -0.62
SFSWAP-208ENST00000539506 CCDC157Q569K6 752 aa11.15□□□□□ -0.62
SFSWAP-208ENST00000539506 DCXRQ7Z4W1 244 aa11.15□□□□□ -0.62
SFSWAP-208ENST00000539506 OR52N4Q8NGI2 321 aa11.15□□□□□ -0.62
SFSWAP-208ENST00000539506 STT3BQ8TCJ2 826 aa11.15□□□□□ -0.62
SFSWAP-208ENST00000539506 C15orf40Q8WUR7 153 aa11.15□□□□□ -0.62
SFSWAP-208ENST00000539506 C14orf79Q96F83 325 aa11.15□□□□□ -0.62
SFSWAP-208ENST00000539506 CNTD2Q9H8S5 307 aa11.15□□□□□ -0.62
SFSWAP-208ENST00000539506 PHF3Q92576 2039 aaKnown RBP11.15□□□□□ -0.62
SFSWAP-208ENST00000539506 DUX1O43812 170 aa11.15□□□□□ -0.62
SFSWAP-208ENST00000539506 AHSA1O95433 338 aa11.15□□□□□ -0.62
SFSWAP-208ENST00000539506 CD37P11049 281 aa11.15□□□□□ -0.62
SFSWAP-208ENST00000539506 ANOS1P23352 680 aa11.15□□□□□ -0.62
SFSWAP-208ENST00000539506 ZBTB25P24278 435 aa11.15□□□□□ -0.62
SFSWAP-208ENST00000539506 RIDAP52758 137 aaKnown RBP11.15□□□□□ -0.62
SFSWAP-208ENST00000539506 FOXK1P85037 733 aa11.15□□□□□ -0.62
SFSWAP-208ENST00000539506 LCN10Q6JVE6 187 aa11.15□□□□□ -0.62
SFSWAP-208ENST00000539506 LYG2Q86SG7 212 aa11.15□□□□□ -0.62
SFSWAP-208ENST00000539506 COMMD2Q86X83 199 aa11.15□□□□□ -0.62
SFSWAP-208ENST00000539506 LYPD6Q86Y78 171 aa11.15□□□□□ -0.62
SFSWAP-208ENST00000539506 PLPP5Q8NEB5 264 aa11.15□□□□□ -0.62
SFSWAP-208ENST00000539506 NFAM1Q8NET5 270 aaPredicted RBP11.15□□□□□ -0.62
SFSWAP-208ENST00000539506 OR5D18Q8NGL1 313 aa11.15□□□□□ -0.62
SFSWAP-208ENST00000539506 NPRL2Q8WTW4 380 aa11.15□□□□□ -0.62
SFSWAP-208ENST00000539506 ASB10Q8WXI3 467 aa11.15□□□□□ -0.62
SFSWAP-208ENST00000539506 CLCC1Q96S66 551 aa11.15□□□□□ -0.62
SFSWAP-208ENST00000539506 PHB2Q99623 299 aa11.15□□□□□ -0.62
SFSWAP-208ENST00000539506 EMC6Q9BV81 110 aa11.15□□□□□ -0.62
SFSWAP-208ENST00000539506 NIT2Q9NQR4 276 aa11.15□□□□□ -0.62
SFSWAP-208ENST00000539506 BIN3Q9NQY0 253 aa11.15□□□□□ -0.62
SFSWAP-208ENST00000539506 DCAF16Q9NXF7 216 aa11.15□□□□□ -0.62
SFSWAP-208ENST00000539506 A0A1B0GTI1 187 aa11.15□□□□□ -0.63
SFSWAP-208ENST00000539506 SFTPBP07988 381 aa11.15□□□□□ -0.63
SFSWAP-208ENST00000539506 GLB1P16278 677 aa11.15□□□□□ -0.63
SFSWAP-208ENST00000539506 GLO1Q04760 184 aa11.15□□□□□ -0.63
SFSWAP-208ENST00000539506 CCDC36Q8IYA8 594 aa11.15□□□□□ -0.63
SFSWAP-208ENST00000539506 OR13C9Q8NGT0 318 aa11.15□□□□□ -0.63
SFSWAP-208ENST00000539506 GLYATL2Q8WU03 294 aa11.15□□□□□ -0.63
SFSWAP-208ENST00000539506 PIK3IP1Q96FE7 263 aa11.15□□□□□ -0.63
SFSWAP-208ENST00000539506 C1orf198Q9H425 327 aa11.15□□□□□ -0.63
SFSWAP-208ENST00000539506 UQCC1Q9NVA1 299 aa11.15□□□□□ -0.63
SFSWAP-208ENST00000539506 LOC107986453A0A1B0GWG9 222 aa11.14□□□□□ -0.63
SFSWAP-208ENST00000539506 LRP3O75074 770 aa11.14□□□□□ -0.63
SFSWAP-208ENST00000539506 CD2P06729 351 aa11.14□□□□□ -0.63
SFSWAP-208ENST00000539506 PSMB6P28072 239 aa11.14□□□□□ -0.63
SFSWAP-208ENST00000539506 RFC3P40938 356 aa11.14□□□□□ -0.63
SFSWAP-208ENST00000539506 SHBQ15464 509 aa11.14□□□□□ -0.63
SFSWAP-208ENST00000539506 KRBOX4Q5JUW0 171 aa11.14□□□□□ -0.63
SFSWAP-208ENST00000539506 FAM209BQ5JX69 171 aa11.14□□□□□ -0.63
SFSWAP-208ENST00000539506 BAP18Q8IXM2 172 aa11.14□□□□□ -0.63
SFSWAP-208ENST00000539506 ZNF101Q8IZC7 436 aa11.14□□□□□ -0.63
SFSWAP-208ENST00000539506 TMEM229BQ8NBD8 167 aa11.14□□□□□ -0.63
SFSWAP-208ENST00000539506 AKR1E2Q96JD6 320 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms