RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 TRIM61Q5EBN2 209 aa21.95■■□□□ 1.11
RAB40C-204ENST00000538492 RPS19BP1Q86WX3 136 aaKnown RBP21.95■■□□□ 1.11
RAB40C-204ENST00000538492 TMEM41AQ96HV5 264 aa21.95■■□□□ 1.11
RAB40C-204ENST00000538492 GPER1Q99527 375 aa21.95■■□□□ 1.11
RAB40C-204ENST00000538492 IER2Q9BTL4 223 aa21.95■■□□□ 1.11
RAB40C-204ENST00000538492 LPAR5Q9H1C0 372 aa21.95■■□□□ 1.11
RAB40C-204ENST00000538492 OR6C65A6NJZ3 312 aa21.95■■□□□ 1.1
RAB40C-204ENST00000538492 SSX5O60225 188 aa21.95■■□□□ 1.1
RAB40C-204ENST00000538492 RP2O75695 350 aa21.95■■□□□ 1.1
RAB40C-204ENST00000538492 PDGFAP04085 211 aa21.95■■□□□ 1.1
RAB40C-204ENST00000538492 CD96P40200 585 aa21.95■■□□□ 1.1
RAB40C-204ENST00000538492 DSCR4P56555 118 aaPredicted RBP21.95■■□□□ 1.1
RAB40C-204ENST00000538492 PGAP1Q75T13 922 aa21.95■■□□□ 1.1
RAB40C-204ENST00000538492 M1APQ8TC57 530 aa21.95■■□□□ 1.1
RAB40C-204ENST00000538492 ZNF775Q96BV0 537 aaPredicted RBP21.95■■□□□ 1.1
RAB40C-204ENST00000538492 HPF1Q9NWY4 346 aa21.95■■□□□ 1.1
RAB40C-204ENST00000538492 NOP16Q9Y3C1 178 aaKnown RBP21.95■■□□□ 1.1
RAB40C-204ENST00000538492 NPIPA2E9PIF3 369 aa21.94■■□□□ 1.1
RAB40C-204ENST00000538492 NPIPA3F8WFD2 350 aa21.94■■□□□ 1.1
RAB40C-204ENST00000538492 ZNF250P15622 560 aa21.94■■□□□ 1.1
RAB40C-204ENST00000538492 SLC6A9P48067 706 aa21.94■■□□□ 1.1
RAB40C-204ENST00000538492 GRB2P62993 217 aaKnown RBP21.94■■□□□ 1.1
RAB40C-204ENST00000538492 PAQR8Q8TEZ7 354 aa21.94■■□□□ 1.1
RAB40C-204ENST00000538492 C1orf147Q96MC9 270 aaPredicted RBP21.94■■□□□ 1.1
RAB40C-204ENST00000538492 ZDBF2Q9HCK1 2354 aa21.94■■□□□ 1.1
RAB40C-204ENST00000538492 SOCS1O15524 211 aa21.94■■□□□ 1.1
RAB40C-204ENST00000538492 LAMTOR5O43504 91 aa21.94■■□□□ 1.1
RAB40C-204ENST00000538492 RRASP10301 218 aa21.94■■□□□ 1.1
RAB40C-204ENST00000538492 MSR1P21757 451 aa21.94■■□□□ 1.1
RAB40C-204ENST00000538492 CD34P28906 385 aa21.94■■□□□ 1.1
RAB40C-204ENST00000538492 MC2RQ01718 297 aa21.94■■□□□ 1.1
RAB40C-204ENST00000538492 LIN54Q6MZP7 749 aa21.94■■□□□ 1.1
RAB40C-204ENST00000538492 DOK3Q7L591 496 aa21.94■■□□□ 1.1
RAB40C-204ENST00000538492 NPRL2Q8WTW4 380 aa21.94■■□□□ 1.1
RAB40C-204ENST00000538492 LIN37Q96GY3 246 aaPredicted RBP21.94■■□□□ 1.1
RAB40C-204ENST00000538492 PGAM5Q96HS1 289 aa21.94■■□□□ 1.1
RAB40C-204ENST00000538492 RBM24Q9BX46 236 aaKnown RBP21.94■■□□□ 1.1
RAB40C-204ENST00000538492 OR5H15A6NDH6 313 aa21.94■■□□□ 1.1
RAB40C-204ENST00000538492 CCSO14618 274 aa21.94■■□□□ 1.1
RAB40C-204ENST00000538492 TNFSF11O14788 317 aa21.94■■□□□ 1.1
RAB40C-204ENST00000538492 CRYZL1O95825 349 aa21.94■■□□□ 1.1
RAB40C-204ENST00000538492 OR5D18Q8NGL1 313 aa21.94■■□□□ 1.1
RAB40C-204ENST00000538492 CST11Q9H112 138 aa21.94■■□□□ 1.1
RAB40C-204ENST00000538492 NELFAQ9H3P2 528 aa21.94■■□□□ 1.1
RAB40C-204ENST00000538492 SLC39A1Q9NY26 324 aa21.94■■□□□ 1.1
RAB40C-204ENST00000538492 SLC2A8Q9NY64 477 aa21.94■■□□□ 1.1
RAB40C-204ENST00000538492 MYO7BQ6PIF6 2116 aa21.93■■□□□ 1.1
RAB40C-204ENST00000538492 IGKV1-9A0A0C4DH69 117 aa21.93■■□□□ 1.1
RAB40C-204ENST00000538492 POM121CA8CG34 1229 aa21.93■■□□□ 1.1
RAB40C-204ENST00000538492 CDC14BO60729 498 aa21.93■■□□□ 1.1
RAB40C-204ENST00000538492 STK17BO94768 372 aa21.93■■□□□ 1.1
RAB40C-204ENST00000538492 PMP2P02689 132 aa21.93■■□□□ 1.1
RAB40C-204ENST00000538492 CASRP41180 1078 aa21.93■■□□□ 1.1
RAB40C-204ENST00000538492 CLPPQ16740 277 aaPredicted RBP21.93■■□□□ 1.1
RAB40C-204ENST00000538492 RSPO4Q2I0M5 234 aaPredicted RBP21.93■■□□□ 1.1
RAB40C-204ENST00000538492 PLAC9Q5JTB6 97 aa21.93■■□□□ 1.1
RAB40C-204ENST00000538492 SMOC1Q9H4F8 434 aa21.93■■□□□ 1.1
RAB40C-204ENST00000538492 MYOZ1Q9NP98 299 aaPredicted RBP21.93■■□□□ 1.1
RAB40C-204ENST00000538492 CCL1P22362 96 aa21.93■■□□□ 1.1
RAB40C-204ENST00000538492 FOLR3P41439 243 aa21.93■■□□□ 1.1
RAB40C-204ENST00000538492 RPS18P62269 152 aaKnown RBP21.93■■□□□ 1.1
RAB40C-204ENST00000538492 PPP1R1AQ13522 171 aa21.93■■□□□ 1.1
RAB40C-204ENST00000538492 AANATQ16613 207 aa21.93■■□□□ 1.1
RAB40C-204ENST00000538492 CLVS2Q5SYC1 327 aa21.93■■□□□ 1.1
RAB40C-204ENST00000538492 BEST3Q8N1M1 668 aa21.93■■□□□ 1.1
RAB40C-204ENST00000538492 MFFQ9GZY8 342 aa21.93■■□□□ 1.1
RAB40C-204ENST00000538492 FBLN5Q9UBX5 448 aa21.93■■□□□ 1.1
RAB40C-204ENST00000538492 PLEKHA6Q9Y2H5 1048 aa21.93■■□□□ 1.1
RAB40C-204ENST00000538492 TRAV14DV4A0A0A6YYC5 116 aa21.92■■□□□ 1.1
RAB40C-204ENST00000538492 OR2AT4A6NND4 320 aa21.92■■□□□ 1.1
RAB40C-204ENST00000538492 SNAPC5O75971 98 aa21.92■■□□□ 1.1
RAB40C-204ENST00000538492 DUSP3P51452 185 aaPredicted RBP21.92■■□□□ 1.1
RAB40C-204ENST00000538492 LSM6P62312 80 aaKnown RBP21.92■■□□□ 1.1
RAB40C-204ENST00000538492 TRA2AQ13595 282 aaKnown RBP eCLIP21.92■■□□□ 1.1
RAB40C-204ENST00000538492 OR9K2Q8NGE7 335 aa21.92■■□□□ 1.1
RAB40C-204ENST00000538492 OR14K1Q8NGZ2 314 aa21.92■■□□□ 1.1
RAB40C-204ENST00000538492 COQ8AQ8NI60 647 aa21.92■■□□□ 1.1
RAB40C-204ENST00000538492 LYZL4Q96KX0 146 aa21.92■■□□□ 1.1
RAB40C-204ENST00000538492 A0A0J9YW62 118 aa21.92■■□□□ 1.1
RAB40C-204ENST00000538492 CRTAPO75718 401 aaPredicted RBP21.92■■□□□ 1.1
RAB40C-204ENST00000538492 SCGNO76038 276 aa21.92■■□□□ 1.1
RAB40C-204ENST00000538492 CER1O95813 267 aa21.92■■□□□ 1.1
RAB40C-204ENST00000538492 CD63P08962 238 aa21.92■■□□□ 1.1
RAB40C-204ENST00000538492 ENDOGQ14249 297 aaKnown RBP21.92■■□□□ 1.1
RAB40C-204ENST00000538492 GSG1LQ6UXU4 331 aa21.92■■□□□ 1.1
RAB40C-204ENST00000538492 SLC39A7Q92504 469 aa21.92■■□□□ 1.1
RAB40C-204ENST00000538492 RAB3CQ96E17 227 aa21.92■■□□□ 1.1
RAB40C-204ENST00000538492 SEC22AQ96IW7 307 aa21.92■■□□□ 1.1
RAB40C-204ENST00000538492 TMEM59Q9BXS4 323 aa21.92■■□□□ 1.1
RAB40C-204ENST00000538492 SH2D2AQ9NP31 389 aa21.92■■□□□ 1.1
RAB40C-204ENST00000538492 RDH8Q9NYR8 311 aa21.92■■□□□ 1.1
RAB40C-204ENST00000538492 RFPL4AA6NLU0 287 aa21.91■■□□□ 1.1
RAB40C-204ENST00000538492 RFPL4AL1F8VTS6 287 aa21.91■■□□□ 1.1
RAB40C-204ENST00000538492 EIF1BO60739 113 aaKnown RBP21.91■■□□□ 1.1
RAB40C-204ENST00000538492 MLF1P58340 268 aa21.91■■□□□ 1.1
RAB40C-204ENST00000538492 LRRC37A5PQ49AS3 106 aa21.91■■□□□ 1.1
RAB40C-204ENST00000538492 SLC25A42Q86VD7 318 aa21.91■■□□□ 1.1
RAB40C-204ENST00000538492 DTX1Q86Y01 620 aa21.91■■□□□ 1.1
RAB40C-204ENST00000538492 MAML2Q8IZL2 1156 aaPredicted RBP21.91■■□□□ 1.1
RAB40C-204ENST00000538492 GJC3Q8NFK1 279 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms