RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 SLC35B4Q969S0 331 aa15.16■□□□□ 0.02
SCARB1-205ENST00000538291 PHIPQ8WWQ0 1821 aa15.16■□□□□ 0.02
SCARB1-205ENST00000538291 THBS4P35443 961 aa15.16■□□□□ 0.02
SCARB1-205ENST00000538291 MEOX1P50221 254 aa15.16■□□□□ 0.02
SCARB1-205ENST00000538291 FAM58AQ8N1B3 248 aa15.16■□□□□ 0.02
SCARB1-205ENST00000538291 ANKRD53Q8N9V6 530 aa15.16■□□□□ 0.02
SCARB1-205ENST00000538291 ST8SIA4Q92187 359 aa15.16■□□□□ 0.02
SCARB1-205ENST00000538291 CMTM3Q96MX0 182 aa15.16■□□□□ 0.02
SCARB1-205ENST00000538291 LALBAP00709 142 aa15.16■□□□□ 0.02
SCARB1-205ENST00000538291 P2RX3P56373 397 aa15.16■□□□□ 0.02
SCARB1-205ENST00000538291 OR2G2Q8NGZ5 317 aa15.16■□□□□ 0.02
SCARB1-205ENST00000538291 CYTIPO60759 359 aa15.15■□□□□ 0.02
SCARB1-205ENST00000538291 MBP02144 154 aa15.15■□□□□ 0.02
SCARB1-205ENST00000538291 ATF1P18846 271 aa15.15■□□□□ 0.02
SCARB1-205ENST00000538291 ABCD3P28288 659 aa15.15■□□□□ 0.02
SCARB1-205ENST00000538291 TMEM211Q6ICI0 200 aa15.15■□□□□ 0.02
SCARB1-205ENST00000538291 MYOZ1Q9NP98 299 aaPredicted RBP15.15■□□□□ 0.02
SCARB1-205ENST00000538291 SEC14L6B5MCN3 397 aa15.15■□□□□ 0.02
SCARB1-205ENST00000538291 OR2F2O95006 317 aa15.15■□□□□ 0.02
SCARB1-205ENST00000538291 OR2F1Q13607 317 aa15.15■□□□□ 0.02
SCARB1-205ENST00000538291 AGERQ15109 404 aa15.15■□□□□ 0.02
SCARB1-205ENST00000538291 PP6455Q8WZ26 134 aa15.15■□□□□ 0.02
SCARB1-205ENST00000538291 ING1Q9UK53 422 aaPredicted RBP15.15■□□□□ 0.02
SCARB1-205ENST00000538291 KPTNQ9Y664 436 aa15.15■□□□□ 0.02
SCARB1-205ENST00000538291 SMLR1H3BR10 107 aa15.15■□□□□ 0.02
SCARB1-205ENST00000538291 TOMM34Q15785 309 aaPredicted RBP15.15■□□□□ 0.02
SCARB1-205ENST00000538291 VMA21Q3ZAQ7 101 aa15.15■□□□□ 0.02
SCARB1-205ENST00000538291 DRAM2Q6UX65 266 aa15.15■□□□□ 0.02
SCARB1-205ENST00000538291 OR13C5Q8NGS8 318 aa15.15■□□□□ 0.02
SCARB1-205ENST00000538291 SLC39A7Q92504 469 aa15.15■□□□□ 0.02
SCARB1-205ENST00000538291 PELI1Q96FA3 418 aa15.15■□□□□ 0.02
SCARB1-205ENST00000538291 A4GNTQ9UNA3 340 aa15.15■□□□□ 0.02
SCARB1-205ENST00000538291 GPX5O75715 221 aa15.15■□□□□ 0.02
SCARB1-205ENST00000538291 CYC1P08574 325 aa15.15■□□□□ 0.02
SCARB1-205ENST00000538291 IAPPP10997 89 aa15.15■□□□□ 0.02
SCARB1-205ENST00000538291 BMI1P35226 326 aa15.15■□□□□ 0.02
SCARB1-205ENST00000538291 TRIP6Q15654 476 aaKnown RBP15.15■□□□□ 0.02
SCARB1-205ENST00000538291 OR2Z1Q8NG97 314 aa15.15■□□□□ 0.02
SCARB1-205ENST00000538291 MOB3AQ96BX8 217 aa15.15■□□□□ 0.02
SCARB1-205ENST00000538291 VN1R1Q9GZP7 353 aa15.15■□□□□ 0.02
SCARB1-205ENST00000538291 DDX60Q8IY21 1712 aaKnown RBP15.15■□□□□ 0.02
SCARB1-205ENST00000538291 FAHP16930 419 aa15.15■□□□□ 0.02
SCARB1-205ENST00000538291 CDAP32320 146 aa15.15■□□□□ 0.02
SCARB1-205ENST00000538291 SSPNQ14714 243 aa15.15■□□□□ 0.02
SCARB1-205ENST00000538291 TOR2AQ5JU69 321 aa15.15■□□□□ 0.02
SCARB1-205ENST00000538291 AVPI1Q5T686 147 aa15.15■□□□□ 0.02
SCARB1-205ENST00000538291 Q8IYB0 196 aa15.15■□□□□ 0.02
SCARB1-205ENST00000538291 PARP12Q9H0J9 701 aaKnown RBP15.15■□□□□ 0.02
SCARB1-205ENST00000538291 SPNS1Q9H2V7 528 aa15.15■□□□□ 0.02
SCARB1-205ENST00000538291 TMEM30CPA0ZSE6 113 aa15.14■□□□□ 0.01
SCARB1-205ENST00000538291 MBTPS2O43462 519 aa15.14■□□□□ 0.01
SCARB1-205ENST00000538291 LRP3O75074 770 aa15.14■□□□□ 0.01
SCARB1-205ENST00000538291 ACER2Q5QJU3 275 aa15.14■□□□□ 0.01
SCARB1-205ENST00000538291 PTOV1Q86YD1 416 aa15.14■□□□□ 0.01
SCARB1-205ENST00000538291 TRMT61AQ96FX7 289 aaKnown RBP15.14■□□□□ 0.01
SCARB1-205ENST00000538291 BTAF1O14981 1849 aa15.14■□□□□ 0.01
SCARB1-205ENST00000538291 FAM90A27PA6NNH2 459 aa15.14■□□□□ 0.01
SCARB1-205ENST00000538291 E5RGE8 158 aa15.14■□□□□ 0.01
SCARB1-205ENST00000538291 H7BYZ3 331 aa15.14■□□□□ 0.01
SCARB1-205ENST00000538291 CBR1P16152 277 aa15.14■□□□□ 0.01
SCARB1-205ENST00000538291 COX5AP20674 150 aa15.14■□□□□ 0.01
SCARB1-205ENST00000538291 GPM6AP51674 278 aa15.14■□□□□ 0.01
SCARB1-205ENST00000538291 B4GALNT1Q00973 533 aa15.14■□□□□ 0.01
SCARB1-205ENST00000538291 OR1L3Q8NH93 324 aa15.14■□□□□ 0.01
SCARB1-205ENST00000538291 OR2T6Q8NHC8 308 aa15.14■□□□□ 0.01
SCARB1-205ENST00000538291 DDOQ99489 341 aa15.14■□□□□ 0.01
SCARB1-205ENST00000538291 ADAT1Q9BUB4 502 aaKnown RBP15.14■□□□□ 0.01
SCARB1-205ENST00000538291 PLEKHA2Q9HB19 425 aa15.14■□□□□ 0.01
SCARB1-205ENST00000538291 NSG2Q9Y328 171 aa15.14■□□□□ 0.01
SCARB1-205ENST00000538291 NHSQ6T4R5 1651 aa15.14■□□□□ 0.01
SCARB1-205ENST00000538291 IGHV1OR21-1A0A087WYE8 117 aa15.14■□□□□ 0.01
SCARB1-205ENST00000538291 NCBP2LA6PVI3 153 aaKnown RBP15.14■□□□□ 0.01
SCARB1-205ENST00000538291 TGM1P22735 817 aa15.14■□□□□ 0.01
SCARB1-205ENST00000538291 MICBQ29980 383 aa15.14■□□□□ 0.01
SCARB1-205ENST00000538291 ANKRD34AQ69YU3 496 aa15.14■□□□□ 0.01
SCARB1-205ENST00000538291 LCN15Q6UWW0 184 aa15.14■□□□□ 0.01
SCARB1-205ENST00000538291 LINC00299Q6ZSB3 139 aa15.14■□□□□ 0.01
SCARB1-205ENST00000538291 ARHGEF39Q8N4T4 335 aa15.14■□□□□ 0.01
SCARB1-205ENST00000538291 LHX4Q969G2 390 aa15.14■□□□□ 0.01
SCARB1-205ENST00000538291 PTDSS2Q9BVG9 487 aa15.14■□□□□ 0.01
SCARB1-205ENST00000538291 HES4Q9HCC6 221 aa15.14■□□□□ 0.01
SCARB1-205ENST00000538291 PSENENQ9NZ42 101 aa15.14■□□□□ 0.01
SCARB1-205ENST00000538291 ONECUT1Q9UBC0 465 aa15.14■□□□□ 0.01
SCARB1-205ENST00000538291 EPHA8P29322 1005 aaPredicted RBP15.14■□□□□ 0.01
SCARB1-205ENST00000538291 ZNF83P51522 516 aa15.14■□□□□ 0.01
SCARB1-205ENST00000538291 RAB35Q15286 201 aa15.14■□□□□ 0.01
SCARB1-205ENST00000538291 OTPQ5XKR4 325 aa15.14■□□□□ 0.01
SCARB1-205ENST00000538291 BTNL8Q6UX41 500 aa15.14■□□□□ 0.01
SCARB1-205ENST00000538291 MFSD4AQ8N468 514 aa15.14■□□□□ 0.01
SCARB1-205ENST00000538291 PIGMQ9H3S5 423 aa15.14■□□□□ 0.01
SCARB1-205ENST00000538291 RNF24Q9Y225 148 aa15.14■□□□□ 0.01
SCARB1-205ENST00000538291 TEX51A0A1B0GUA7 166 aa15.13■□□□□ 0.01
SCARB1-205ENST00000538291 ALG1L2C9J202 215 aa15.13■□□□□ 0.01
SCARB1-205ENST00000538291 PSMB6P28072 239 aa15.13■□□□□ 0.01
SCARB1-205ENST00000538291 HRH1P35367 487 aa15.13■□□□□ 0.01
SCARB1-205ENST00000538291 VASH2Q86V25 355 aa15.13■□□□□ 0.01
SCARB1-205ENST00000538291 PLA2G2FQ9BZM2 168 aa15.13■□□□□ 0.01
SCARB1-205ENST00000538291 TIMM9Q9Y5J7 89 aa15.13■□□□□ 0.01
SCARB1-205ENST00000538291 HIST2H3AQ71DI3 136 aa15.13■□□□□ 0.01
SCARB1-205ENST00000538291 OR4F5Q8NH21 305 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms