RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 GPX8Q8TED1 209 aa7.7□□□□□ -1.18
UBE3B-208ENST00000538070 SLC25A28Q96A46 364 aa7.7□□□□□ -1.18
UBE3B-208ENST00000538070 ZBTB8AQ96BR9 441 aa7.7□□□□□ -1.18
UBE3B-208ENST00000538070 RAB3CQ96E17 227 aa7.7□□□□□ -1.18
UBE3B-208ENST00000538070 ARHGAP5-AS1Q96IT6 56 aa7.7□□□□□ -1.18
UBE3B-208ENST00000538070 TMEM59Q9BXS4 323 aa7.7□□□□□ -1.18
UBE3B-208ENST00000538070 ZC4H2Q9NQZ6 224 aa7.7□□□□□ -1.18
UBE3B-208ENST00000538070 PLA2G3Q9NZ20 509 aa7.7□□□□□ -1.18
UBE3B-208ENST00000538070 KCNN3Q9UGI6 736 aa7.7□□□□□ -1.18
UBE3B-208ENST00000538070 PIGLQ9Y2B2 252 aa7.7□□□□□ -1.18
UBE3B-208ENST00000538070 R4GN57 208 aa7.7□□□□□ -1.18
UBE3B-208ENST00000538070 TPRP12270 2363 aaKnown RBP7.69□□□□□ -1.18
UBE3B-208ENST00000538070 IGLV3-12A0A075B6K2 115 aa7.69□□□□□ -1.18
UBE3B-208ENST00000538070 FAM166BA8MTA8 275 aa7.69□□□□□ -1.18
UBE3B-208ENST00000538070 MSX1P28360 303 aa7.69□□□□□ -1.18
UBE3B-208ENST00000538070 SEC61A1P61619 476 aaKnown RBP7.69□□□□□ -1.18
UBE3B-208ENST00000538070 TOR2AQ5JU69 321 aa7.69□□□□□ -1.18
UBE3B-208ENST00000538070 ELFN2Q5R3F8 820 aa7.69□□□□□ -1.18
UBE3B-208ENST00000538070 C1QL2Q7Z5L3 287 aa7.69□□□□□ -1.18
UBE3B-208ENST00000538070 ZNF546Q86UE3 836 aa7.69□□□□□ -1.18
UBE3B-208ENST00000538070 ADAD2Q8NCV1 583 aaKnown RBP7.69□□□□□ -1.18
UBE3B-208ENST00000538070 OR4K15Q8NH41 348 aa7.69□□□□□ -1.18
UBE3B-208ENST00000538070 CCDC107Q8WV48 283 aa7.69□□□□□ -1.18
UBE3B-208ENST00000538070 CMTM3Q96MX0 182 aa7.69□□□□□ -1.18
UBE3B-208ENST00000538070 GPR137Q96N19 417 aa7.69□□□□□ -1.18
UBE3B-208ENST00000538070 ZNF471Q9BX82 626 aaPredicted RBP7.69□□□□□ -1.18
UBE3B-208ENST00000538070 ACKR4Q9NPB9 350 aa7.69□□□□□ -1.18
UBE3B-208ENST00000538070 RAB22AQ9UL26 194 aa7.69□□□□□ -1.18
UBE3B-208ENST00000538070 PADI1Q9ULC6 663 aa7.69□□□□□ -1.18
UBE3B-208ENST00000538070 KCNK7Q9Y2U2 307 aa7.69□□□□□ -1.18
UBE3B-208ENST00000538070 A0A096LPE4 126 aa7.69□□□□□ -1.18
UBE3B-208ENST00000538070 A0A1W2PPZ6 126 aa7.69□□□□□ -1.18
UBE3B-208ENST00000538070 SPRY1O43609 319 aaPredicted RBP7.69□□□□□ -1.18
UBE3B-208ENST00000538070 RP2O75695 350 aa7.69□□□□□ -1.18
UBE3B-208ENST00000538070 PPP3CBP16298 524 aa7.69□□□□□ -1.18
UBE3B-208ENST00000538070 AMY2BP19961 511 aa7.69□□□□□ -1.18
UBE3B-208ENST00000538070 BLVRBP30043 206 aaPredicted RBP7.69□□□□□ -1.18
UBE3B-208ENST00000538070 MMP16P51512 607 aa7.69□□□□□ -1.18
UBE3B-208ENST00000538070 CAPZA1P52907 286 aa7.69□□□□□ -1.18
UBE3B-208ENST00000538070 P2RX3P56373 397 aa7.69□□□□□ -1.18
UBE3B-208ENST00000538070 DHRS2Q13268 280 aa7.69□□□□□ -1.18
UBE3B-208ENST00000538070 ATPAF1Q5TC12 328 aaPredicted RBP7.69□□□□□ -1.18
UBE3B-208ENST00000538070 TMUB2Q71RG4 321 aa7.69□□□□□ -1.18
UBE3B-208ENST00000538070 THRSPQ92748 146 aa7.69□□□□□ -1.18
UBE3B-208ENST00000538070 CXorf58Q96LI9 332 aa7.69□□□□□ -1.18
UBE3B-208ENST00000538070 CST11Q9H112 138 aa7.69□□□□□ -1.18
UBE3B-208ENST00000538070 CRLF2Q9HC73 371 aa7.69□□□□□ -1.18
UBE3B-208ENST00000538070 LOC400499M0QZD8 3231 aa7.69□□□□□ -1.18
UBE3B-208ENST00000538070 DSPP15924 2871 aaKnown RBP7.69□□□□□ -1.18
UBE3B-208ENST00000538070 ERCC1P07992 297 aaPredicted RBP7.68□□□□□ -1.18
UBE3B-208ENST00000538070 CCL2P13500 99 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 CSNK2A1P68400 391 aaPredicted RBP7.68□□□□□ -1.18
UBE3B-208ENST00000538070 PPP1R1AQ13522 171 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 CSRP2Q16527 193 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 ELP2Q6IA86 826 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 MRPL14Q6P1L8 145 aaKnown RBP7.68□□□□□ -1.18
UBE3B-208ENST00000538070 UNQ6126/PRO20091Q6UXV3 157 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 CSNK2A3Q8NEV1 391 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 MFRPQ9BY79 579 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 NPDC1Q9NQX5 325 aaPredicted RBP7.68□□□□□ -1.18
UBE3B-208ENST00000538070 MED13Q9UHV7 2174 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 ROS1P08922 2347 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 SPTA1P02549 2419 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 IGHV1-45A0A0A0MS14 117 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 IGHV3-64DA0A0J9YX35 117 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 RAB27BO00194 218 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 TOX3O15405 576 aaPredicted RBP7.68□□□□□ -1.18
UBE3B-208ENST00000538070 AQP8O94778 261 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 COX6A1P12074 109 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 SUMO3P55854 103 aaPredicted RBP7.68□□□□□ -1.18
UBE3B-208ENST00000538070 CARD18P57730 90 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 ZNF385CQ66K41 422 aaPredicted RBP7.68□□□□□ -1.18
UBE3B-208ENST00000538070 ALKBH2Q6NS38 261 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 ZNF774Q6NX45 483 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 ZNF813Q6ZN06 617 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 RFPL4BQ6ZWI9 263 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 CCDC28AQ8IWP9 274 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 PAQR4Q8N4S7 273 aaPredicted RBP7.68□□□□□ -1.18
UBE3B-208ENST00000538070 PNLDC1Q8NA58 520 aaKnown RBP7.68□□□□□ -1.18
UBE3B-208ENST00000538070 SUN5Q8TC36 379 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 ZNF845Q96IR2 970 aaPredicted RBP7.68□□□□□ -1.18
UBE3B-208ENST00000538070 HES7Q9BYE0 225 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 HEXA-AS1Q9H8Q6 139 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 OPN4Q9UHM6 478 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 VSIG4Q9Y279 399 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 MCRIP1C9JLW8 97 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 KLF7O75840 302 aaPredicted RBP7.68□□□□□ -1.18
UBE3B-208ENST00000538070 GIPP09681 153 aaPredicted RBP7.68□□□□□ -1.18
UBE3B-208ENST00000538070 NAGAP17050 411 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 ITGA3P26006 1051 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 S100A11P31949 105 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 OPRM1P35372 400 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 RAG2P55895 527 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 ZP4Q12836 540 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 ESCO2Q56NI9 601 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 FDX2Q6P4F2 183 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 C1orf210Q8IVY1 113 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 ELP5Q8TE02 316 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 DYRK2Q92630 601 aa7.68□□□□□ -1.18
UBE3B-208ENST00000538070 SPOCK3Q9BQ16 436 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms