RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 MT-ND1P03886 318 aa6.61□□□□□ -1.35
CLIP1-206ENST00000535290 TFF1P04155 84 aa6.61□□□□□ -1.35
CLIP1-206ENST00000535290 IL6P05231 212 aa6.61□□□□□ -1.35
CLIP1-206ENST00000535290 MUC1P15941 1255 aaPredicted RBP6.61□□□□□ -1.35
CLIP1-206ENST00000535290 PAICSP22234 425 aaKnown RBP6.61□□□□□ -1.35
CLIP1-206ENST00000535290 ECI1P42126 302 aa6.61□□□□□ -1.35
CLIP1-206ENST00000535290 GSK3BP49841 420 aa6.61□□□□□ -1.35
CLIP1-206ENST00000535290 RPL27P61353 136 aaKnown RBP6.61□□□□□ -1.35
CLIP1-206ENST00000535290 FADDQ13158 208 aa6.61□□□□□ -1.35
CLIP1-206ENST00000535290 AQP6Q13520 282 aa6.61□□□□□ -1.35
CLIP1-206ENST00000535290 BLMHQ13867 455 aa6.61□□□□□ -1.35
CLIP1-206ENST00000535290 DUSP7Q16829 419 aa6.61□□□□□ -1.35
CLIP1-206ENST00000535290 C6orf10Q5SRN2 563 aa6.61□□□□□ -1.35
CLIP1-206ENST00000535290 GCNT6Q5T4J0 391 aa6.61□□□□□ -1.35
CLIP1-206ENST00000535290 KCTD18Q6PI47 426 aaPredicted RBP6.61□□□□□ -1.35
CLIP1-206ENST00000535290 ARMC8Q8IUR7 673 aa6.61□□□□□ -1.35
CLIP1-206ENST00000535290 C11orf53Q8IXP5 236 aa6.61□□□□□ -1.35
CLIP1-206ENST00000535290 MKXQ8IYA7 352 aa6.61□□□□□ -1.35
CLIP1-206ENST00000535290 GPR32P1Q8NGA4 272 aa6.61□□□□□ -1.35
CLIP1-206ENST00000535290 OR4X2Q8NGF9 303 aa6.61□□□□□ -1.35
CLIP1-206ENST00000535290 OR5D13Q8NGL4 314 aa6.61□□□□□ -1.35
CLIP1-206ENST00000535290 FNDC8Q8TC99 324 aa6.61□□□□□ -1.35
CLIP1-206ENST00000535290 LRRC29Q8WV35 223 aa6.61□□□□□ -1.35
CLIP1-206ENST00000535290 SGTBQ96EQ0 304 aa6.61□□□□□ -1.35
CLIP1-206ENST00000535290 APOPT1Q96IL0 206 aa6.61□□□□□ -1.35
CLIP1-206ENST00000535290 ITCHQ96J02 903 aa6.61□□□□□ -1.35
CLIP1-206ENST00000535290 MPP4Q96JB8 637 aa6.61□□□□□ -1.35
CLIP1-206ENST00000535290 P2RX4Q99571 388 aa6.61□□□□□ -1.35
CLIP1-206ENST00000535290 ADAT1Q9BUB4 502 aaKnown RBP6.61□□□□□ -1.35
CLIP1-206ENST00000535290 TXLNGYQ9BZA5 131 aa6.61□□□□□ -1.35
CLIP1-206ENST00000535290 C20orf27Q9GZN8 174 aa6.61□□□□□ -1.35
CLIP1-206ENST00000535290 PAIP1Q9H074 479 aaKnown RBP6.61□□□□□ -1.35
CLIP1-206ENST00000535290 EDA2RQ9HAV5 297 aa6.61□□□□□ -1.35
CLIP1-206ENST00000535290 FAM90A8PA6NJQ4 464 aa6.6□□□□□ -1.35
CLIP1-206ENST00000535290 CD300LBA8K4G0 201 aa6.6□□□□□ -1.35
CLIP1-206ENST00000535290 SPAG7O75391 227 aa6.6□□□□□ -1.35
CLIP1-206ENST00000535290 SERPINB7O75635 380 aa6.6□□□□□ -1.35
CLIP1-206ENST00000535290 BPGMP07738 259 aa6.6□□□□□ -1.35
CLIP1-206ENST00000535290 CTLA4P16410 223 aa6.6□□□□□ -1.35
CLIP1-206ENST00000535290 JUNBP17275 347 aaPredicted RBP6.6□□□□□ -1.35
CLIP1-206ENST00000535290 HOXB9P17482 250 aaPredicted RBP6.6□□□□□ -1.35
CLIP1-206ENST00000535290 LORP23490 312 aaPredicted RBP6.6□□□□□ -1.35
CLIP1-206ENST00000535290 COX7A1P24310 79 aa6.6□□□□□ -1.35
CLIP1-206ENST00000535290 POU1F1P28069 291 aa6.6□□□□□ -1.35
CLIP1-206ENST00000535290 CASQ1P31415 396 aa6.6□□□□□ -1.35
CLIP1-206ENST00000535290 ERVFRD-1P60508 538 aa6.6□□□□□ -1.35
CLIP1-206ENST00000535290 DGUOKQ16854 277 aa6.6□□□□□ -1.35
CLIP1-206ENST00000535290 ALG10Q5BKT4 473 aa6.6□□□□□ -1.35
CLIP1-206ENST00000535290 LDLRAD2Q5SZI1 272 aa6.6□□□□□ -1.35
CLIP1-206ENST00000535290 C8orf86Q6ZUL3 223 aa6.6□□□□□ -1.35
CLIP1-206ENST00000535290 PGAP1Q75T13 922 aa6.6□□□□□ -1.35
CLIP1-206ENST00000535290 OVCH2Q7RTZ1 564 aa6.6□□□□□ -1.35
CLIP1-206ENST00000535290 NAA40Q86UY6 237 aa6.6□□□□□ -1.35
CLIP1-206ENST00000535290 LRRC75AQ8NAA5 344 aa6.6□□□□□ -1.35
CLIP1-206ENST00000535290 OR51D1Q8NGF3 324 aa6.6□□□□□ -1.35
CLIP1-206ENST00000535290 OR9Q1Q8NGQ5 310 aa6.6□□□□□ -1.35
CLIP1-206ENST00000535290 RPS4Y2Q8TD47 263 aa6.6□□□□□ -1.35
CLIP1-206ENST00000535290 SLC22A4Q9H015 551 aa6.6□□□□□ -1.35
CLIP1-206ENST00000535290 ELL3Q9HB65 397 aaPredicted RBP6.6□□□□□ -1.35
CLIP1-206ENST00000535290 KCNK9Q9NPC2 374 aa6.6□□□□□ -1.35
CLIP1-206ENST00000535290 SLC25A37Q9NYZ2 338 aa6.6□□□□□ -1.35
CLIP1-206ENST00000535290 ATPIF1Q9UII2 106 aa6.6□□□□□ -1.35
CLIP1-206ENST00000535290 AURKCQ9UQB9 309 aa6.6□□□□□ -1.35
CLIP1-206ENST00000535290 SMAD5-AS1Q9Y6J3 95 aa6.6□□□□□ -1.35
CLIP1-206ENST00000535290 FRAS1Q86XX4 4008 aa6.6□□□□□ -1.35
CLIP1-206ENST00000535290 GMDSO60547 372 aa6.59□□□□□ -1.35
CLIP1-206ENST00000535290 RHBDL1O75783 438 aa6.59□□□□□ -1.35
CLIP1-206ENST00000535290 NDUFB7P17568 137 aa6.59□□□□□ -1.35
CLIP1-206ENST00000535290 ANOS1P23352 680 aa6.59□□□□□ -1.35
CLIP1-206ENST00000535290 MYCNOSP40205 109 aa6.59□□□□□ -1.35
CLIP1-206ENST00000535290 CEBPDP49716 269 aaPredicted RBP6.59□□□□□ -1.35
CLIP1-206ENST00000535290 RPL14P50914 215 aaKnown RBP6.59□□□□□ -1.35
CLIP1-206ENST00000535290 LGALS4P56470 323 aa6.59□□□□□ -1.35
CLIP1-206ENST00000535290 CTXN1P60606 82 aa6.59□□□□□ -1.35
CLIP1-206ENST00000535290 CSNK2BP67870 215 aa6.59□□□□□ -1.35
CLIP1-206ENST00000535290 SCARB2Q14108 478 aa6.59□□□□□ -1.35
CLIP1-206ENST00000535290 SSX2Q16385 188 aa6.59□□□□□ -1.35
CLIP1-206ENST00000535290 ATPAF1Q5TC12 328 aaPredicted RBP6.59□□□□□ -1.35
CLIP1-206ENST00000535290 STUMQ69YW2 141 aa6.59□□□□□ -1.35
CLIP1-206ENST00000535290 SLC2A7Q6PXP3 512 aa6.59□□□□□ -1.35
CLIP1-206ENST00000535290 WDR86Q86TI4 376 aa6.59□□□□□ -1.35
CLIP1-206ENST00000535290 NKAIN4Q8IVV8 208 aa6.59□□□□□ -1.35
CLIP1-206ENST00000535290 MSRB3Q8IXL7 192 aa6.59□□□□□ -1.35
CLIP1-206ENST00000535290 C11orf42Q8N5U0 333 aa6.59□□□□□ -1.35
CLIP1-206ENST00000535290 OR52H1Q8NGJ2 320 aa6.59□□□□□ -1.35
CLIP1-206ENST00000535290 TMEM255BQ8WV15 326 aa6.59□□□□□ -1.35
CLIP1-206ENST00000535290 LIPHQ8WWY8 451 aa6.59□□□□□ -1.35
CLIP1-206ENST00000535290 GTF2H4Q92759 462 aa6.59□□□□□ -1.35
CLIP1-206ENST00000535290 ISOC1Q96CN7 298 aa6.59□□□□□ -1.35
CLIP1-206ENST00000535290 DUX3Q96PT4 197 aa6.59□□□□□ -1.35
CLIP1-206ENST00000535290 SORT1Q99523 831 aa6.59□□□□□ -1.35
CLIP1-206ENST00000535290 COQ7Q99807 217 aa6.59□□□□□ -1.35
CLIP1-206ENST00000535290 RMND5AQ9H871 391 aa6.59□□□□□ -1.35
CLIP1-206ENST00000535290 EVA1AQ9H8M9 152 aa6.59□□□□□ -1.35
CLIP1-206ENST00000535290 RNPEPL1Q9HAU8 725 aa6.59□□□□□ -1.35
CLIP1-206ENST00000535290 GRPEL1Q9HAV7 217 aa6.59□□□□□ -1.35
CLIP1-206ENST00000535290 ABCB10Q9NRK6 738 aa6.59□□□□□ -1.35
CLIP1-206ENST00000535290 SNTG1Q9NSN8 517 aa6.59□□□□□ -1.35
CLIP1-206ENST00000535290 SLC25A10Q9UBX3 287 aaPredicted RBP6.59□□□□□ -1.35
CLIP1-206ENST00000535290 SCOCQ9UIL1 159 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms