RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 Q6ZRU5 148 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 ZCCHC24Q8N2G6 241 aaKnown RBP-0.29□□□□□ -2.46
COPB1-212ENST00000534771 NKAIN3Q8N8D7 197 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 OR5C1Q8NGR4 320 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 OR2A1Q8NGT9 310 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 KCNG3Q8TAE7 436 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 LMX1AQ8TE12 382 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 ITLN2Q8WWU7 325 aaPredicted RBP-0.29□□□□□ -2.46
COPB1-212ENST00000534771 ATP6V1E2Q96A05 226 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 APOBEC3DQ96AK3 386 aaPredicted RBP-0.29□□□□□ -2.46
COPB1-212ENST00000534771 PKNOX2Q96KN3 472 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 OR8B2Q96RD0 313 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 PANX2Q96RD6 677 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 PEBP4Q96S96 227 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 ATP6V0BQ99437 205 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 MICU1Q9BPX6 476 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 ZNF251Q9BRH9 671 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 SLC19A3Q9BZV2 496 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 PORCNQ9H237 461 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 VPS37BQ9H9H4 285 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 FAM60AQ9NP50 221 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 POLE4Q9NR33 117 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 MFHAS1Q9Y4C4 1052 aa-0.29□□□□□ -2.46
COPB1-212ENST00000534771 SIGLEC1Q9BZZ2 1709 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 CNTNAP1P78357 1384 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 NEBP20929 6669 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 IGKV3-7A0A075B6H7 116 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 PDZK1P1A8MUH7 402 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 FNDC10F2Z333 226 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 GOSR2O14653 212 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 CLDN9O95484 217 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 ARF4P18085 180 aaPredicted RBP-0.3□□□□□ -2.46
COPB1-212ENST00000534771 U2AF2P26368 475 aaKnown RBP eCLIP-0.3□□□□□ -2.467e-14■■□□□ 13.2
COPB1-212ENST00000534771 CA8P35219 290 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 INPP1P49441 399 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 PPT1P50897 306 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 SSR4P51571 173 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 SLC36A3Q495N2 470 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 PYCR3Q53H96 274 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 CNSTQ6PJW8 725 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 NPSR1Q6W5P4 371 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 Q6ZSR6 202 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 SLC25A48Q6ZT89 311 aaKnown RBP-0.3□□□□□ -2.46
COPB1-212ENST00000534771 MRPL55Q7Z7F7 128 aaKnown RBP-0.3□□□□□ -2.46
COPB1-212ENST00000534771 TGIF2LXQ8IUE1 241 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 LRRC8AQ8IWT6 810 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 DRAM1Q8N682 238 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 ANKFN1Q8N957 763 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 UBAC2Q8NBM4 344 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 GPR26Q8NDV2 337 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 OR4M2Q8NGB6 313 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 OR4C16Q8NGL9 310 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 DCAKDQ8WVC6 231 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 TMEM230Q96A57 120 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 IFT74Q96LB3 600 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 PITX2Q99697 317 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 KCNS3Q9BQ31 491 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 PARD6BQ9BYG5 372 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 TBL1XR1Q9BZK7 514 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 TOLLIPQ9H0E2 274 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 XKR8Q9H6D3 395 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 AZI2Q9H6S1 392 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 NMRAL1Q9HBL8 299 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 RAB18Q9NP72 206 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 DOK5Q9P104 306 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 NUP50Q9UKX7 468 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 ANGPT4Q9Y264 503 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 C22orf24Q9Y442 160 aa-0.3□□□□□ -2.46
COPB1-212ENST00000534771 KMT2CQ8NEZ4 4911 aaKnown RBP-0.31□□□□□ -2.46
COPB1-212ENST00000534771 DENND4AQ7Z401 1863 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 PCLOQ9Y6V0 5065 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 DYSFO75923 2080 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 A0A087WZY1 265 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 LOC102724200A0A096LPH7 203 aaPredicted RBP-0.31□□□□□ -2.46
COPB1-212ENST00000534771 A0A1B0GTI1 187 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 METTL21EPA6NDL7 271 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 SYCE1LA8MT33 242 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 ODF3BA8MYP8 253 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 F5H5T6 163 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 F8VP50 259 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 F8WDY8 70 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 M0R1X1 148 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 CDC7O00311 574 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 PLPP3O14495 311 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 FFAR1O14842 300 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 EEDO75530 441 aaKnown RBP-0.31□□□□□ -2.46
COPB1-212ENST00000534771 TRGV3P03979 118 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 ZNF22P17026 224 aaPredicted RBP-0.31□□□□□ -2.46
COPB1-212ENST00000534771 KITLGP21583 273 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 MSR1P21757 451 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 HTR1DP28221 377 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 COILP38432 576 aaPredicted RBP-0.31□□□□□ -2.46
COPB1-212ENST00000534771 GRIA1P42261 906 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 RGS6P49758 472 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 NUDT2P50583 147 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 PPP1CAP62136 330 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 MRPS22P82650 360 aaKnown RBP-0.31□□□□□ -2.46
COPB1-212ENST00000534771 IFITM3Q01628 133 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 LIPEQ05469 1076 aa-0.31□□□□□ -2.46
COPB1-212ENST00000534771 ATP5G2Q06055 141 aa-0.31□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms