RNA–Protein interactions for RNA: ENST00000534663.1

RAG1-203, Transcript of recombination activating 1, humanhuman

TSL 1 (best)

Gene RAG1, Length 3,707 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-203ENST00000534663 TNFRSF10CO14798 259 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 EIF4E2O60573 245 aaKnown RBP6.09□□□□□ -1.43
RAG1-203ENST00000534663 TSPAN15O95858 294 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 CD8AP01732 235 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 ABCD3P28288 659 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 BLVRBP30043 206 aaPredicted RBP6.09□□□□□ -1.43
RAG1-203ENST00000534663 SLC26A5P58743 744 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 CYCSP99999 105 aaKnown RBP6.09□□□□□ -1.43
RAG1-203ENST00000534663 UNC119Q13432 240 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 Q6ZRG5 221 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 EIF4E3Q8N5X7 224 aaKnown RBP6.09□□□□□ -1.43
RAG1-203ENST00000534663 SECTM1Q8WVN6 248 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 C11orf40Q8WZ69 217 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 DAZLQ92904 295 aaKnown RBP6.09□□□□□ -1.43
RAG1-203ENST00000534663 TCTN2Q96GX1 697 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 PBOV1Q9GZY1 135 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 LAT2Q9GZY6 243 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 RGCCQ9H4X1 137 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 IFT22Q9H7X7 185 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 GPR84Q9NQS5 396 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 B3GALT1Q9Y5Z6 326 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 PCDH15Q96QU1 1955 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 IGLV1-36A0A0B4J1U3 117 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 FAM221AA4D161 298 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 PRAMEF26H0Y7S4 382 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 H0YIZ8 118 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 XRCC2O43543 280 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 DUS4LO95620 317 aaKnown RBP6.09□□□□□ -1.43
RAG1-203ENST00000534663 APOC1P02654 83 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 TNFRSF4P43489 277 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 MEOX2P50222 304 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 BLKP51451 505 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 PNLIPRP2P54317 469 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 SNU13P55769 128 aaKnown RBP6.09□□□□□ -1.43
RAG1-203ENST00000534663 TOMM20Q15388 145 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 HFEQ30201 348 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 SP6Q3SY56 376 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 ZNF260Q3ZCT1 412 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 DRAM2Q6UX65 266 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 RBMS3Q6XE24 437 aaKnown RBP6.09□□□□□ -1.43
RAG1-203ENST00000534663 HSD17B11Q8NBQ5 300 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 SEMA6DQ8NFY4 1073 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 SFT2D1Q8WV19 159 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 PIGTQ969N2 578 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 SCARF2Q96GP6 870 aaPredicted RBP6.09□□□□□ -1.43
RAG1-203ENST00000534663 OR10C1Q96KK4 312 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 FAM117AQ9C073 453 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 BARX1Q9HBU1 254 aaPredicted RBP6.09□□□□□ -1.43
RAG1-203ENST00000534663 SLC17A5Q9NRA2 495 aa6.09□□□□□ -1.43
RAG1-203ENST00000534663 C14orf166Q9Y224 244 aaKnown RBP6.09□□□□□ -1.43
RAG1-203ENST00000534663 YBX2Q9Y2T7 364 aaKnown RBP6.09□□□□□ -1.43
RAG1-203ENST00000534663 TRANK1O15050 2925 aa6.09□□□□□ -1.44
RAG1-203ENST00000534663 ARPC4-TTLL3A0A0A6YYG9 625 aa6.09□□□□□ -1.44
RAG1-203ENST00000534663 RNASEK-C17orf49H0YIS7 233 aa6.09□□□□□ -1.44
RAG1-203ENST00000534663 K7EPK0 472 aa6.09□□□□□ -1.44
RAG1-203ENST00000534663 PLPP3O14495 311 aa6.09□□□□□ -1.44
RAG1-203ENST00000534663 RER1O15258 196 aa6.09□□□□□ -1.44
RAG1-203ENST00000534663 DIRAS3O95661 229 aa6.09□□□□□ -1.44
RAG1-203ENST00000534663 ADH6P28332 368 aa6.09□□□□□ -1.44
RAG1-203ENST00000534663 PTGFRP43088 359 aa6.09□□□□□ -1.44
RAG1-203ENST00000534663 CBX5P45973 191 aa6.09□□□□□ -1.44
RAG1-203ENST00000534663 SCAND1P57086 179 aa6.09□□□□□ -1.44
RAG1-203ENST00000534663 YPEL5P62699 121 aa6.09□□□□□ -1.44
RAG1-203ENST00000534663 PJVKQ0ZLH3 352 aa6.09□□□□□ -1.44
RAG1-203ENST00000534663 ZNF345Q14585 488 aa6.09□□□□□ -1.44
RAG1-203ENST00000534663 TMEM128Q5BJH2 165 aa6.09□□□□□ -1.44
RAG1-203ENST00000534663 C9orf50Q5SZB4 431 aa6.09□□□□□ -1.44
RAG1-203ENST00000534663 FAM69BQ5VUD6 431 aa6.09□□□□□ -1.44
RAG1-203ENST00000534663 CDCP2Q5VXM1 449 aa6.09□□□□□ -1.44
RAG1-203ENST00000534663 EIF5AL1Q6IS14 154 aaKnown RBP6.09□□□□□ -1.44
RAG1-203ENST00000534663 Q6ZS52 159 aa6.09□□□□□ -1.44
RAG1-203ENST00000534663 NAA40Q86UY6 237 aa6.09□□□□□ -1.44
RAG1-203ENST00000534663 FAM71E2Q8N5Q1 922 aa6.09□□□□□ -1.44
RAG1-203ENST00000534663 NKAIN3Q8N8D7 197 aa6.09□□□□□ -1.44
RAG1-203ENST00000534663 GPBAR1Q8TDU6 330 aa6.09□□□□□ -1.44
RAG1-203ENST00000534663 C8orf44Q96CB5 159 aa6.09□□□□□ -1.44
RAG1-203ENST00000534663 DUSP15Q9H1R2 295 aaPredicted RBP6.09□□□□□ -1.44
RAG1-203ENST00000534663 C1orf198Q9H425 327 aa6.09□□□□□ -1.44
RAG1-203ENST00000534663 DZANK1Q9NVP4 752 aa6.09□□□□□ -1.44
RAG1-203ENST00000534663 CTSFQ9UBX1 484 aa6.09□□□□□ -1.44
RAG1-203ENST00000534663 CACNA1DQ01668 2161 aa6.08□□□□□ -1.44
RAG1-203ENST00000534663 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.08□□□□□ -1.44
RAG1-203ENST00000534663 A0A1B0GTI1 187 aa6.08□□□□□ -1.44
RAG1-203ENST00000534663 RAB19A4D1S5 217 aa6.08□□□□□ -1.44
RAG1-203ENST00000534663 FAM221BA6H8Z2 402 aa6.08□□□□□ -1.44
RAG1-203ENST00000534663 LINC01387J3KSC0 135 aa6.08□□□□□ -1.44
RAG1-203ENST00000534663 TNFSF12O43508 249 aa6.08□□□□□ -1.44
RAG1-203ENST00000534663 TMEM127O75204 238 aa6.08□□□□□ -1.44
RAG1-203ENST00000534663 TXNDC12O95881 172 aa6.08□□□□□ -1.44
RAG1-203ENST00000534663 ARG1P05089 322 aa6.08□□□□□ -1.44
RAG1-203ENST00000534663 SLC25A4P12235 298 aa6.08□□□□□ -1.44
RAG1-203ENST00000534663 GABRG2P18507 467 aa6.08□□□□□ -1.44
RAG1-203ENST00000534663 FBLP22087 321 aaKnown RBP6.08□□□□□ -1.44
RAG1-203ENST00000534663 OPRM1P35372 400 aa6.08□□□□□ -1.44
RAG1-203ENST00000534663 RFC3P40938 356 aa6.08□□□□□ -1.44
RAG1-203ENST00000534663 HSF1Q00613 529 aa6.08□□□□□ -1.44
RAG1-203ENST00000534663 SSBP1Q04837 148 aaKnown RBP6.08□□□□□ -1.44
RAG1-203ENST00000534663 RIPPLY1Q0D2K3 151 aa6.08□□□□□ -1.44
RAG1-203ENST00000534663 FZD2Q14332 565 aa6.08□□□□□ -1.44
RAG1-203ENST00000534663 IGSF11Q5DX21 431 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms