RNA–Protein interactions for RNA: ENST00000533413.5

CKAP5-212, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best)

Gene CKAP5, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-212ENST00000533413 MAZP56270 477 aaKnown RBP4.85□□□□□ -1.63
CKAP5-212ENST00000533413 OR12D2P58182 307 aa4.85□□□□□ -1.63
CKAP5-212ENST00000533413 CD81P60033 236 aa4.85□□□□□ -1.63
CKAP5-212ENST00000533413 FUT5Q11128 374 aa4.85□□□□□ -1.63
CKAP5-212ENST00000533413 KLF9Q13886 244 aaPredicted RBP4.85□□□□□ -1.63
CKAP5-212ENST00000533413 ZNF750Q32MQ0 723 aa4.85□□□□□ -1.63
CKAP5-212ENST00000533413 AKIRIN2Q53H80 203 aa4.85□□□□□ -1.63
CKAP5-212ENST00000533413 EIPR1Q53HC9 387 aa4.85□□□□□ -1.63
CKAP5-212ENST00000533413 FAM74A1Q5RGS3 127 aa4.85□□□□□ -1.63
CKAP5-212ENST00000533413 HIST2H2BCQ6DN03 193 aa4.85□□□□□ -1.63
CKAP5-212ENST00000533413 HIST2H2BDQ6DRA6 164 aa4.85□□□□□ -1.63
CKAP5-212ENST00000533413 ESPNLQ6ZVH7 1005 aa4.85□□□□□ -1.63
CKAP5-212ENST00000533413 PARS2Q7L3T8 475 aaKnown RBP4.85□□□□□ -1.63
CKAP5-212ENST00000533413 UBE3DQ7Z6J8 389 aa4.85□□□□□ -1.63
CKAP5-212ENST00000533413 TMEM156Q8N614 296 aa4.85□□□□□ -1.63
CKAP5-212ENST00000533413 WDSUB1Q8N9V3 476 aa4.85□□□□□ -1.63
CKAP5-212ENST00000533413 FAM71CQ8NEG0 241 aa4.85□□□□□ -1.63
CKAP5-212ENST00000533413 DNAAF1Q8NEP3 725 aa4.85□□□□□ -1.63
CKAP5-212ENST00000533413 MARCH1Q8TCQ1 289 aa4.85□□□□□ -1.63
CKAP5-212ENST00000533413 CXorf40AQ8TE69 158 aa4.85□□□□□ -1.63
CKAP5-212ENST00000533413 SMIM4Q8WVI0 70 aa4.85□□□□□ -1.63
CKAP5-212ENST00000533413 FCAMRQ8WWV6 532 aa4.85□□□□□ -1.63
CKAP5-212ENST00000533413 SMPDL3BQ92485 455 aa4.85□□□□□ -1.63
CKAP5-212ENST00000533413 HSPA12BQ96MM6 686 aa4.85□□□□□ -1.63
CKAP5-212ENST00000533413 RNF2Q99496 336 aa4.85□□□□□ -1.63
CKAP5-212ENST00000533413 TEAD3Q99594 435 aa4.85□□□□□ -1.63
CKAP5-212ENST00000533413 CCDC3Q9BQI4 270 aa4.85□□□□□ -1.63
CKAP5-212ENST00000533413 GPR174Q9BXC1 333 aa4.85□□□□□ -1.63
CKAP5-212ENST00000533413 MRPL13Q9BYD1 178 aaKnown RBP4.85□□□□□ -1.63
CKAP5-212ENST00000533413 MTHFD2LQ9H903 347 aaPredicted RBP4.85□□□□□ -1.63
CKAP5-212ENST00000533413 APMAPQ9HDC9 416 aa4.85□□□□□ -1.63
CKAP5-212ENST00000533413 LHX9Q9NQ69 397 aa4.85□□□□□ -1.63
CKAP5-212ENST00000533413 SIDT1Q9NXL6 827 aaKnown RBP4.85□□□□□ -1.63
CKAP5-212ENST00000533413 ALKBH4Q9NXW9 302 aa4.85□□□□□ -1.63
CKAP5-212ENST00000533413 MED11Q9P086 117 aa4.85□□□□□ -1.63
CKAP5-212ENST00000533413 FLVCR2Q9UPI3 526 aa4.85□□□□□ -1.63
CKAP5-212ENST00000533413 AK6Q9Y3D8 172 aaKnown RBP4.85□□□□□ -1.63
CKAP5-212ENST00000533413 HS3ST3A1Q9Y663 406 aa4.85□□□□□ -1.63
CKAP5-212ENST00000533413 TRAV1-2A0A0B4J238 106 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 A0A0G2JK05 382 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 COLCA2A8K830 154 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 HMSDA8MTL9 139 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 J3QRE1 110 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 SDC3O75056 442 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 KRT33AO76009 404 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 DXOO77932 396 aaKnown RBP4.84□□□□□ -1.63
CKAP5-212ENST00000533413 GIPP09681 153 aaPredicted RBP4.84□□□□□ -1.63
CKAP5-212ENST00000533413 SLC35G4P0C7Q5 338 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 EPXP11678 715 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 GABRA1P14867 456 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 ZNF28P17035 718 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 ATF1P18846 271 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 ERVK-25P63136 954 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 HSD11B2P80365 405 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 CD69Q07108 199 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 PMPCAQ10713 525 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 ZNF658BQ4V348 819 aaPredicted RBP4.84□□□□□ -1.63
CKAP5-212ENST00000533413 UBE2NLQ5JXB2 153 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 OR52W1Q6IF63 320 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 RPL13AP3Q6NVV1 102 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 RPTNQ6XPR3 784 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 Q6ZTK2 550 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 TMEM17Q86X19 198 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 KMT5CQ86Y97 462 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 BMPERQ8N8U9 685 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 ADPRHL1Q8NDY3 354 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 ARRDC3Q96B67 414 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 ABHD6Q9BV23 337 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 ACTRT3Q9BYD9 372 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 ENKD1Q9H0I2 346 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 ARRDC1-AS1Q9H2J1 176 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 NOX3Q9HBY0 568 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 HRASLSQ9HDD0 168 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 PPP4R1LQ9P1A2 415 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 PEMTQ9UBM1 199 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 PITPNC1Q9UKF7 332 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.84□□□□□ -1.63
CKAP5-212ENST00000533413 GOLT1BQ9Y3E0 138 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 WDR45Q9Y484 360 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 RALGAPA1Q6GYQ0 2036 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 ZNF106Q9H2Y7 1883 aaKnown RBP4.84□□□□□ -1.63
CKAP5-212ENST00000533413 CACNA1IQ9P0X4 2223 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 SCN8AQ9UQD0 1980 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 OR2M5A3KFT3 312 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 FITM1A5D6W6 292 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 TRAPPC13A5PLN9 417 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 LRIT2A6NDA9 550 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 ANTXRLA6NF34 631 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 MKRN2OSH3BPM6 223 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 CDC42EP2O14613 210 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 LCMT2O60294 686 aaKnown RBP4.84□□□□□ -1.63
CKAP5-212ENST00000533413 APOC3P02656 99 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 ATP1B1P05026 303 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 TBXA2RP21731 343 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 HIST1H1TP22492 207 aaPredicted RBP4.84□□□□□ -1.63
CKAP5-212ENST00000533413 ITGA3P26006 1051 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 PRDX2P32119 198 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 SLC35D3Q5M8T2 416 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 ASPHD2Q6ICH7 369 aa4.84□□□□□ -1.63
CKAP5-212ENST00000533413 FAHD2BQ6P2I3 314 aaPredicted RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms