RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.23■□□□□ 0.03
SSSCA1-206ENST00000531405 FAM90A1Q86YD7 464 aa15.23■□□□□ 0.03
SSSCA1-206ENST00000531405 FGFRL1Q8N441 504 aa15.23■□□□□ 0.03
SSSCA1-206ENST00000531405 ZNRF4Q8WWF5 429 aa15.23■□□□□ 0.03
SSSCA1-206ENST00000531405 SPTSSAQ969W0 71 aa15.23■□□□□ 0.03
SSSCA1-206ENST00000531405 TRIM15Q9C019 465 aa15.23■□□□□ 0.03
SSSCA1-206ENST00000531405 SLC22A4Q9H015 551 aa15.23■□□□□ 0.03
SSSCA1-206ENST00000531405 RNF114Q9Y508 228 aa15.23■□□□□ 0.03
SSSCA1-206ENST00000531405 TRAV38-1A0A0B4J264 116 aa15.22■□□□□ 0.03
SSSCA1-206ENST00000531405 A6NLC8 198 aa15.22■□□□□ 0.03
SSSCA1-206ENST00000531405 M0QZ24 198 aa15.22■□□□□ 0.03
SSSCA1-206ENST00000531405 NDUFAB1O14561 156 aa15.22■□□□□ 0.03
SSSCA1-206ENST00000531405 DVL1O14640 695 aa15.22■□□□□ 0.03
SSSCA1-206ENST00000531405 GPR137BO60478 399 aa15.22■□□□□ 0.03
SSSCA1-206ENST00000531405 SEMG1P04279 462 aa15.22■□□□□ 0.03
SSSCA1-206ENST00000531405 ZNF823P16415 610 aa15.22■□□□□ 0.03
SSSCA1-206ENST00000531405 ELF3P78545 371 aaPredicted RBP15.22■□□□□ 0.03
SSSCA1-206ENST00000531405 ASPHD2Q6ICH7 369 aa15.22■□□□□ 0.03
SSSCA1-206ENST00000531405 BTN2A1Q7KYR7 527 aa15.22■□□□□ 0.03
SSSCA1-206ENST00000531405 GCSAMQ8N6F7 178 aa15.22■□□□□ 0.03
SSSCA1-206ENST00000531405 CYB561A3Q8NBI2 242 aa15.22■□□□□ 0.03
SSSCA1-206ENST00000531405 SCCPDHQ8NBX0 429 aa15.22■□□□□ 0.03
SSSCA1-206ENST00000531405 TBC1D15Q8TC07 691 aa15.22■□□□□ 0.03
SSSCA1-206ENST00000531405 DYRK2Q92630 601 aa15.22■□□□□ 0.03
SSSCA1-206ENST00000531405 MMP27Q9H306 513 aa15.22■□□□□ 0.03
SSSCA1-206ENST00000531405 ADA2Q9NZK5 511 aa15.22■□□□□ 0.03
SSSCA1-206ENST00000531405 NOP16Q9Y3C1 178 aaKnown RBP15.22■□□□□ 0.03
SSSCA1-206ENST00000531405 N6AMT1Q9Y5N5 214 aa15.22■□□□□ 0.03
SSSCA1-206ENST00000531405 TET2Q6N021 2002 aaPredicted RBP15.22■□□□□ 0.03
SSSCA1-206ENST00000531405 A0A1B0GW55 424 aa15.21■□□□□ 0.03
SSSCA1-206ENST00000531405 hCG_1807616A0A1W2PRN6 198 aa15.21■□□□□ 0.03
SSSCA1-206ENST00000531405 CCDC22O60826 627 aa15.21■□□□□ 0.03
SSSCA1-206ENST00000531405 DUX4L2P0CJ85 424 aa15.21■□□□□ 0.03
SSSCA1-206ENST00000531405 DUX4L3P0CJ86 424 aa15.21■□□□□ 0.03
SSSCA1-206ENST00000531405 DUX4L4P0CJ87 422 aa15.21■□□□□ 0.03
SSSCA1-206ENST00000531405 DUX4L5P0CJ88 424 aa15.21■□□□□ 0.03
SSSCA1-206ENST00000531405 DUX4L6P0CJ89 424 aa15.21■□□□□ 0.03
SSSCA1-206ENST00000531405 DUX4L7P0CJ90 424 aa15.21■□□□□ 0.03
SSSCA1-206ENST00000531405 SLC2A1P11166 492 aa15.21■□□□□ 0.03
SSSCA1-206ENST00000531405 GSSP48637 474 aa15.21■□□□□ 0.03
SSSCA1-206ENST00000531405 PDCD1Q15116 288 aa15.21■□□□□ 0.03
SSSCA1-206ENST00000531405 DUX4L9Q6RFH8 374 aaPredicted RBP15.21■□□□□ 0.03
SSSCA1-206ENST00000531405 PLPP7Q8NBV4 271 aa15.21■□□□□ 0.03
SSSCA1-206ENST00000531405 PROKR2Q8NFJ6 384 aa15.21■□□□□ 0.03
SSSCA1-206ENST00000531405 OR56B2PQ8NGI1 322 aa15.21■□□□□ 0.03
SSSCA1-206ENST00000531405 OR51L1Q8NGJ5 315 aa15.21■□□□□ 0.03
SSSCA1-206ENST00000531405 LINC01006Q8NI28 216 aa15.21■□□□□ 0.03
SSSCA1-206ENST00000531405 ST8SIA4Q92187 359 aa15.21■□□□□ 0.03
SSSCA1-206ENST00000531405 RBM4BQ9BQ04 359 aaKnown RBP15.21■□□□□ 0.03
SSSCA1-206ENST00000531405 CCDC134Q9H6E4 229 aa15.21■□□□□ 0.03
SSSCA1-206ENST00000531405 EGLN3Q9H6Z9 239 aa15.21■□□□□ 0.03
SSSCA1-206ENST00000531405 TRIM36Q9NQ86 728 aa15.21■□□□□ 0.03
SSSCA1-206ENST00000531405 MRPL15Q9P015 296 aaKnown RBP15.21■□□□□ 0.03
SSSCA1-206ENST00000531405 DUX4Q9UBX2 424 aa15.21■□□□□ 0.03
SSSCA1-206ENST00000531405 KCNG2Q9UJ96 466 aa15.21■□□□□ 0.03
SSSCA1-206ENST00000531405 TIMM23O14925 209 aa15.2■□□□□ 0.02
SSSCA1-206ENST00000531405 NDUFA2O43678 99 aa15.2■□□□□ 0.02
SSSCA1-206ENST00000531405 IDH3BO43837 385 aa15.2■□□□□ 0.02
SSSCA1-206ENST00000531405 OTX1P32242 354 aaPredicted RBP15.2■□□□□ 0.02
SSSCA1-206ENST00000531405 IER3P46695 156 aa15.2■□□□□ 0.02
SSSCA1-206ENST00000531405 PRKXP51817 358 aa15.2■□□□□ 0.02
SSSCA1-206ENST00000531405 SMIM11AP58511 58 aa15.2■□□□□ 0.02
SSSCA1-206ENST00000531405 DRAM2Q6UX65 266 aa15.2■□□□□ 0.02
SSSCA1-206ENST00000531405 DCXRQ7Z4W1 244 aa15.2■□□□□ 0.02
SSSCA1-206ENST00000531405 PIP4P2Q8N4L2 257 aa15.2■□□□□ 0.02
SSSCA1-206ENST00000531405 PYURFQ96I23 114 aa15.2■□□□□ 0.02
SSSCA1-206ENST00000531405 COPS4Q9BT78 406 aa15.2■□□□□ 0.02
SSSCA1-206ENST00000531405 SEMA6AQ9H2E6 1030 aa15.2■□□□□ 0.02
SSSCA1-206ENST00000531405 SPAG4Q9NPE6 437 aa15.2■□□□□ 0.02
SSSCA1-206ENST00000531405 A0A0G2JK05 382 aa15.19■□□□□ 0.02
SSSCA1-206ENST00000531405 BHLHE40O14503 412 aa15.19■□□□□ 0.02
SSSCA1-206ENST00000531405 GMNNO75496 209 aa15.19■□□□□ 0.02
SSSCA1-206ENST00000531405 RRM2P31350 389 aa15.19■□□□□ 0.02
SSSCA1-206ENST00000531405 PROK1P58294 105 aa15.19■□□□□ 0.02
SSSCA1-206ENST00000531405 RPL15P61313 204 aaKnown RBP15.19■□□□□ 0.02
SSSCA1-206ENST00000531405 PRB3Q04118 309 aaPredicted RBP15.19■□□□□ 0.02
SSSCA1-206ENST00000531405 PGBD2Q6P3X8 592 aa15.19■□□□□ 0.02
SSSCA1-206ENST00000531405 VMO1Q7Z5L0 202 aa15.19■□□□□ 0.02
SSSCA1-206ENST00000531405 LDLRAD3Q86YD5 345 aa15.19■□□□□ 0.02
SSSCA1-206ENST00000531405 UBE2FQ969M7 185 aa15.19■□□□□ 0.02
SSSCA1-206ENST00000531405 DDOQ99489 341 aa15.19■□□□□ 0.02
SSSCA1-206ENST00000531405 PKP2Q99959 881 aa15.19■□□□□ 0.02
SSSCA1-206ENST00000531405 GORASP2Q9H8Y8 452 aa15.19■□□□□ 0.02
SSSCA1-206ENST00000531405 RPUSD1Q9UJJ7 312 aaKnown RBP15.19■□□□□ 0.02
SSSCA1-206ENST00000531405 COMMD3-BMI1R4GMX3 469 aa15.19■□□□□ 0.02
SSSCA1-206ENST00000531405 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.18■□□□□ 0.02
SSSCA1-206ENST00000531405 CLPXO76031 633 aa15.18■□□□□ 0.02
SSSCA1-206ENST00000531405 TSPAN15O95858 294 aa15.18■□□□□ 0.02
SSSCA1-206ENST00000531405 LHBP01229 141 aa15.18■□□□□ 0.02
SSSCA1-206ENST00000531405 SPARCP09486 303 aa15.18■□□□□ 0.02
SSSCA1-206ENST00000531405 MSX2P35548 267 aaPredicted RBP15.18■□□□□ 0.02
SSSCA1-206ENST00000531405 TSPAN31Q12999 210 aa15.18■□□□□ 0.02
SSSCA1-206ENST00000531405 PCK2Q16822 640 aa15.18■□□□□ 0.02
SSSCA1-206ENST00000531405 TEX36Q5VZQ5 186 aa15.18■□□□□ 0.02
SSSCA1-206ENST00000531405 WDR86Q86TI4 376 aa15.18■□□□□ 0.02
SSSCA1-206ENST00000531405 C11orf53Q8IXP5 236 aa15.18■□□□□ 0.02
SSSCA1-206ENST00000531405 OR9Q1Q8NGQ5 310 aa15.18■□□□□ 0.02
SSSCA1-206ENST00000531405 GNPDA2Q8TDQ7 276 aa15.18■□□□□ 0.02
SSSCA1-206ENST00000531405 CCL13Q99616 98 aa15.18■□□□□ 0.02
SSSCA1-206ENST00000531405 CENPMQ9NSP4 180 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms