RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 MCRIP2Q9BUT9 160 aaKnown RBP6.61□□□□□ -1.35
CD44-232ENST00000531118 PRSS22Q9GZN4 317 aa6.61□□□□□ -1.35
CD44-232ENST00000531118 TXNIPQ9H3M7 391 aa6.61□□□□□ -1.35
CD44-232ENST00000531118 METTL8Q9H825 291 aaKnown RBP6.61□□□□□ -1.35
CD44-232ENST00000531118 EVA1AQ9H8M9 152 aa6.61□□□□□ -1.35
CD44-232ENST00000531118 MEPEQ9NQ76 525 aaPredicted RBP6.61□□□□□ -1.35
CD44-232ENST00000531118 C1orf123Q9NWV4 160 aa6.61□□□□□ -1.35
CD44-232ENST00000531118 SLC7A7Q9UM01 511 aa6.61□□□□□ -1.35
CD44-232ENST00000531118 PRPF19Q9UMS4 504 aaKnown RBP6.61□□□□□ -1.35
CD44-232ENST00000531118 SORL1Q92673 2214 aa6.6□□□□□ -1.35
CD44-232ENST00000531118 TRBV23-1A0A0A0MS06 115 aa6.6□□□□□ -1.35
CD44-232ENST00000531118 hCG_1807616A0A1W2PRN6 198 aa6.6□□□□□ -1.35
CD44-232ENST00000531118 TMEM82A0PJX8 343 aa6.6□□□□□ -1.35
CD44-232ENST00000531118 NKX6-3A6NJ46 265 aa6.6□□□□□ -1.35
CD44-232ENST00000531118 A6NLC8 198 aa6.6□□□□□ -1.35
CD44-232ENST00000531118 H7C1C5 153 aa6.6□□□□□ -1.35
CD44-232ENST00000531118 ITM2AO43736 263 aa6.6□□□□□ -1.35
CD44-232ENST00000531118 IGF2P01344 180 aa6.6□□□□□ -1.35
CD44-232ENST00000531118 SHBGP04278 402 aa6.6□□□□□ -1.35
CD44-232ENST00000531118 SELLP14151 372 aa6.6□□□□□ -1.35
CD44-232ENST00000531118 HOXB9P17482 250 aaPredicted RBP6.6□□□□□ -1.35
CD44-232ENST00000531118 AQP1P29972 269 aa6.6□□□□□ -1.35
CD44-232ENST00000531118 GUCA1AP43080 201 aaPredicted RBP6.6□□□□□ -1.35
CD44-232ENST00000531118 LCN6P62502 163 aa6.6□□□□□ -1.35
CD44-232ENST00000531118 CDK6Q00534 326 aa6.6□□□□□ -1.35
CD44-232ENST00000531118 OR8G1Q15617 311 aa6.6□□□□□ -1.35
CD44-232ENST00000531118 PCK2Q16822 640 aa6.6□□□□□ -1.35
CD44-232ENST00000531118 PLA1AQ53H76 456 aa6.6□□□□□ -1.35
CD44-232ENST00000531118 C6orf10Q5SRN2 563 aa6.6□□□□□ -1.35
CD44-232ENST00000531118 REEP3Q6NUK4 255 aa6.6□□□□□ -1.35
CD44-232ENST00000531118 ZNF826PQ6ZT77 177 aa6.6□□□□□ -1.35
CD44-232ENST00000531118 MSANTD1Q6ZTZ1 278 aa6.6□□□□□ -1.35
CD44-232ENST00000531118 OR6T1Q8NGN1 323 aa6.6□□□□□ -1.35
CD44-232ENST00000531118 OR1F12Q8NHA8 337 aa6.6□□□□□ -1.35
CD44-232ENST00000531118 ADAMTS16Q8TE57 1224 aa6.6□□□□□ -1.35
CD44-232ENST00000531118 H1FXQ92522 213 aaKnown RBP6.6□□□□□ -1.35
CD44-232ENST00000531118 MPP4Q96JB8 637 aa6.6□□□□□ -1.35
CD44-232ENST00000531118 RBP7Q96R05 134 aa6.6□□□□□ -1.35
CD44-232ENST00000531118 CCL13Q99616 98 aa6.6□□□□□ -1.35
CD44-232ENST00000531118 HCAR1Q9BXC0 346 aa6.6□□□□□ -1.35
CD44-232ENST00000531118 TXLNGYQ9BZA5 131 aa6.6□□□□□ -1.35
CD44-232ENST00000531118 ZMAT5Q9UDW3 170 aaKnown RBP6.6□□□□□ -1.35
CD44-232ENST00000531118 CAPN7Q9Y6W3 813 aa6.6□□□□□ -1.35
CD44-232ENST00000531118 TRAPPC13A5PLN9 417 aa6.59□□□□□ -1.35
CD44-232ENST00000531118 A6NDX4 124 aa6.59□□□□□ -1.35
CD44-232ENST00000531118 B2RBV5 119 aa6.59□□□□□ -1.35
CD44-232ENST00000531118 F2RL2O00254 374 aa6.59□□□□□ -1.35
CD44-232ENST00000531118 ACOT8O14734 319 aa6.59□□□□□ -1.35
CD44-232ENST00000531118 POLR3GO15318 223 aaPredicted RBP6.59□□□□□ -1.35
CD44-232ENST00000531118 RAMP3O60896 148 aa6.59□□□□□ -1.35
CD44-232ENST00000531118 JTBO76095 146 aa6.59□□□□□ -1.35
CD44-232ENST00000531118 IL6P05231 212 aa6.59□□□□□ -1.35
CD44-232ENST00000531118 TSPAN19P0C672 248 aa6.59□□□□□ -1.35
CD44-232ENST00000531118 RPL27P61353 136 aaKnown RBP6.59□□□□□ -1.35
CD44-232ENST00000531118 ECH1Q13011 328 aa6.59□□□□□ -1.35
CD44-232ENST00000531118 GK2Q14410 553 aaPredicted RBP6.59□□□□□ -1.35
CD44-232ENST00000531118 CCDC92Q53HC0 331 aaPredicted RBP6.59□□□□□ -1.35
CD44-232ENST00000531118 RABL3Q5HYI8 236 aa6.59□□□□□ -1.35
CD44-232ENST00000531118 OTPQ5XKR4 325 aa6.59□□□□□ -1.35
CD44-232ENST00000531118 UNQ9370/PRO34162Q6UXP9 181 aa6.59□□□□□ -1.35
CD44-232ENST00000531118 SLC36A1Q7Z2H8 476 aa6.59□□□□□ -1.35
CD44-232ENST00000531118 KRT77Q7Z794 578 aa6.59□□□□□ -1.35
CD44-232ENST00000531118 ARMC8Q8IUR7 673 aa6.59□□□□□ -1.35
CD44-232ENST00000531118 EIF1ADQ8N9N8 165 aaKnown RBP6.59□□□□□ -1.35
CD44-232ENST00000531118 OR4X2Q8NGF9 303 aa6.59□□□□□ -1.35
CD44-232ENST00000531118 TCP10LQ8TDR4 215 aa6.59□□□□□ -1.35
CD44-232ENST00000531118 LRRC8CQ8TDW0 803 aa6.59□□□□□ -1.35
CD44-232ENST00000531118 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.59□□□□□ -1.35
CD44-232ENST00000531118 SGTBQ96EQ0 304 aa6.59□□□□□ -1.35
CD44-232ENST00000531118 ITCHQ96J02 903 aa6.59□□□□□ -1.35
CD44-232ENST00000531118 KIRREL1Q96J84 757 aa6.59□□□□□ -1.35
CD44-232ENST00000531118 PRSS27Q9BQR3 290 aa6.59□□□□□ -1.35
CD44-232ENST00000531118 ZNF649Q9BS31 505 aa6.59□□□□□ -1.35
CD44-232ENST00000531118 RMND5AQ9H871 391 aa6.59□□□□□ -1.35
CD44-232ENST00000531118 AURKCQ9UQB9 309 aa6.59□□□□□ -1.35
CD44-232ENST00000531118 NDUFAF1Q9Y375 327 aa6.59□□□□□ -1.35
CD44-232ENST00000531118 NOP16Q9Y3C1 178 aaKnown RBP6.59□□□□□ -1.35
CD44-232ENST00000531118 KMT2AQ03164 3969 aa6.58□□□□□ -1.36
CD44-232ENST00000531118 A0A1W2PQ09 198 aa6.58□□□□□ -1.36
CD44-232ENST00000531118 VGLL3A8MV65 326 aa6.58□□□□□ -1.36
CD44-232ENST00000531118 CLIC1O00299 241 aa6.58□□□□□ -1.36
CD44-232ENST00000531118 NDUFB3O43676 98 aa6.58□□□□□ -1.36
CD44-232ENST00000531118 SPAG7O75391 227 aa6.58□□□□□ -1.36
CD44-232ENST00000531118 SLC22A3O75751 556 aa6.58□□□□□ -1.36
CD44-232ENST00000531118 MT-ND1P03886 318 aa6.58□□□□□ -1.36
CD44-232ENST00000531118 BPGMP07738 259 aa6.58□□□□□ -1.36
CD44-232ENST00000531118 FUT1P19526 365 aa6.58□□□□□ -1.36
CD44-232ENST00000531118 CA6P23280 308 aa6.58□□□□□ -1.36
CD44-232ENST00000531118 BLMHQ13867 455 aa6.58□□□□□ -1.36
CD44-232ENST00000531118 SCARB2Q14108 478 aa6.58□□□□□ -1.36
CD44-232ENST00000531118 ALG10Q5BKT4 473 aa6.58□□□□□ -1.36
CD44-232ENST00000531118 LRRC10Q5BKY1 277 aa6.58□□□□□ -1.36
CD44-232ENST00000531118 CYP2R1Q6VVX0 501 aa6.58□□□□□ -1.36
CD44-232ENST00000531118 RBM45Q8IUH3 476 aaKnown RBP6.58□□□□□ -1.36
CD44-232ENST00000531118 SMYD1Q8NB12 490 aa6.58□□□□□ -1.36
CD44-232ENST00000531118 BVESQ8NE79 360 aa6.58□□□□□ -1.36
CD44-232ENST00000531118 GPR32P1Q8NGA4 272 aa6.58□□□□□ -1.36
CD44-232ENST00000531118 OR51D1Q8NGF3 324 aa6.58□□□□□ -1.36
CD44-232ENST00000531118 OR4D11Q8NGI4 311 aa6.58□□□□□ -1.36
CD44-232ENST00000531118 PKNOX2Q96KN3 472 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms