RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 FSTP19883 344 aa12.52□□□□□ -0.41
TTC39A-216ENST00000530004 IGHV1-2P23083 117 aa12.52□□□□□ -0.41
TTC39A-216ENST00000530004 HGFACQ04756 655 aa12.52□□□□□ -0.41
TTC39A-216ENST00000530004 KRTAP27-1Q3LI81 207 aa12.52□□□□□ -0.41
TTC39A-216ENST00000530004 HIKESHIQ53FT3 197 aa12.52□□□□□ -0.41
TTC39A-216ENST00000530004 HES5Q5TA89 166 aa12.52□□□□□ -0.41
TTC39A-216ENST00000530004 ZNF808Q8N4W9 903 aaPredicted RBP12.52□□□□□ -0.41
TTC39A-216ENST00000530004 TRMT10AQ8TBZ6 339 aaKnown RBP12.52□□□□□ -0.41
TTC39A-216ENST00000530004 DIRAS2Q96HU8 199 aa12.52□□□□□ -0.41
TTC39A-216ENST00000530004 FAM71F1Q96KD3 344 aaPredicted RBP12.52□□□□□ -0.41
TTC39A-216ENST00000530004 SOX7Q9BT81 388 aa12.52□□□□□ -0.41
TTC39A-216ENST00000530004 ABRACLQ9P1F3 81 aa12.52□□□□□ -0.41
TTC39A-216ENST00000530004 FREM1Q5H8C1 2179 aa12.52□□□□□ -0.41
TTC39A-216ENST00000530004 PCNX1Q96RV3 2341 aa12.51□□□□□ -0.41
TTC39A-216ENST00000530004 A0A0B4J203 849 aa12.51□□□□□ -0.41
TTC39A-216ENST00000530004 A6NIN4 97 aa12.51□□□□□ -0.41
TTC39A-216ENST00000530004 IFITM5A6NNB3 132 aa12.51□□□□□ -0.41
TTC39A-216ENST00000530004 FAM90A27PA6NNH2 459 aa12.51□□□□□ -0.41
TTC39A-216ENST00000530004 IGFBP3P17936 291 aaPredicted RBP12.51□□□□□ -0.41
TTC39A-216ENST00000530004 COX5AP20674 150 aa12.51□□□□□ -0.41
TTC39A-216ENST00000530004 CCL1P22362 96 aa12.51□□□□□ -0.41
TTC39A-216ENST00000530004 CD40LGP29965 261 aa12.51□□□□□ -0.41
TTC39A-216ENST00000530004 P2RY6Q15077 328 aa12.51□□□□□ -0.41
TTC39A-216ENST00000530004 SNAI3Q3KNW1 292 aa12.51□□□□□ -0.41
TTC39A-216ENST00000530004 DOK3Q7L591 496 aa12.51□□□□□ -0.41
TTC39A-216ENST00000530004 CPEB3Q8NE35 698 aaKnown RBP12.51□□□□□ -0.41
TTC39A-216ENST00000530004 OR1J2Q8NGS2 313 aa12.51□□□□□ -0.41
TTC39A-216ENST00000530004 BCL2L2Q92843 193 aaPredicted RBP12.51□□□□□ -0.41
TTC39A-216ENST00000530004 ADAT3Q96EY9 351 aaPredicted RBP12.51□□□□□ -0.41
TTC39A-216ENST00000530004 NOX3Q9HBY0 568 aa12.51□□□□□ -0.41
TTC39A-216ENST00000530004 PALMDQ9NP74 551 aa12.51□□□□□ -0.41
TTC39A-216ENST00000530004 ADAM30Q9UKF2 790 aa12.51□□□□□ -0.41
TTC39A-216ENST00000530004 V9GYH0 126 aa12.51□□□□□ -0.41
TTC39A-216ENST00000530004 A0A0U1RQV5 110 aa12.51□□□□□ -0.41
TTC39A-216ENST00000530004 UBL3O95164 117 aa12.51□□□□□ -0.41
TTC39A-216ENST00000530004 IGLV3-1P01715 115 aa12.51□□□□□ -0.41
TTC39A-216ENST00000530004 SNRPBP14678 240 aaKnown RBP12.51□□□□□ -0.41
TTC39A-216ENST00000530004 ARR3P36575 388 aa12.51□□□□□ -0.41
TTC39A-216ENST00000530004 ASCL1P50553 236 aa12.51□□□□□ -0.41
TTC39A-216ENST00000530004 PSMD7P51665 324 aa12.51□□□□□ -0.41
TTC39A-216ENST00000530004 RAB1AP62820 205 aa12.51□□□□□ -0.41
TTC39A-216ENST00000530004 SRSF1Q07955 248 aaKnown RBP eCLIP12.51□□□□□ -0.41
TTC39A-216ENST00000530004 TMEM53Q6P2H8 277 aa12.51□□□□□ -0.41
TTC39A-216ENST00000530004 SERPINA12Q8IW75 414 aa12.51□□□□□ -0.41
TTC39A-216ENST00000530004 OR52H1Q8NGJ2 320 aa12.51□□□□□ -0.41
TTC39A-216ENST00000530004 ZNF671Q8TAW3 534 aa12.51□□□□□ -0.41
TTC39A-216ENST00000530004 LYZL4Q96KX0 146 aa12.51□□□□□ -0.41
TTC39A-216ENST00000530004 OR10A2Q9H208 303 aa12.51□□□□□ -0.41
TTC39A-216ENST00000530004 ELOVL5Q9NYP7 299 aa12.51□□□□□ -0.41
TTC39A-216ENST00000530004 ATPIF1Q9UII2 106 aa12.51□□□□□ -0.41
TTC39A-216ENST00000530004 DIDO1Q9BTC0 2240 aaKnown RBP12.5□□□□□ -0.41
TTC39A-216ENST00000530004 NKX2-6A6NCS4 301 aa12.5□□□□□ -0.41
TTC39A-216ENST00000530004 FABP12A6NFH5 140 aa12.5□□□□□ -0.41
TTC39A-216ENST00000530004 WIPF3A6NGB9 483 aa12.5□□□□□ -0.41
TTC39A-216ENST00000530004 LYZL6O75951 148 aa12.5□□□□□ -0.41
TTC39A-216ENST00000530004 AGFG2O95081 481 aa12.5□□□□□ -0.41
TTC39A-216ENST00000530004 CLDN14O95500 239 aa12.5□□□□□ -0.41
TTC39A-216ENST00000530004 LCATP04180 440 aa12.5□□□□□ -0.41
TTC39A-216ENST00000530004 ZNF20P17024 532 aa12.5□□□□□ -0.41
TTC39A-216ENST00000530004 GNALP38405 381 aa12.5□□□□□ -0.41
TTC39A-216ENST00000530004 TGFBR3Q03167 851 aa12.5□□□□□ -0.41
TTC39A-216ENST00000530004 TBRG1Q3YBR2 411 aa12.5□□□□□ -0.41
TTC39A-216ENST00000530004 FBXL19-AS1Q494R0 122 aa12.5□□□□□ -0.41
TTC39A-216ENST00000530004 CNIH2Q6PI25 160 aa12.5□□□□□ -0.41
TTC39A-216ENST00000530004 FAM131AQ6UXB0 335 aa12.5□□□□□ -0.41
TTC39A-216ENST00000530004 DPPA2Q7Z7J5 298 aa12.5□□□□□ -0.41
TTC39A-216ENST00000530004 CXorf67Q86X51 503 aaPredicted RBP12.5□□□□□ -0.41
TTC39A-216ENST00000530004 SNX29P2Q8IUI4 249 aa12.5□□□□□ -0.41
TTC39A-216ENST00000530004 SAMD12Q8N8I0 201 aa12.5□□□□□ -0.41
TTC39A-216ENST00000530004 OR51A2Q8NGJ7 313 aa12.5□□□□□ -0.41
TTC39A-216ENST00000530004 OR5H6Q8NGV6 325 aa12.5□□□□□ -0.41
TTC39A-216ENST00000530004 NANOS1Q8WY41 292 aaKnown RBP12.5□□□□□ -0.41
TTC39A-216ENST00000530004 KCNJ16Q9NPI9 418 aa12.5□□□□□ -0.41
TTC39A-216ENST00000530004 FAM25AB3EWG3 89 aa12.49□□□□□ -0.41
TTC39A-216ENST00000530004 FAM25CB3EWG5 89 aa12.49□□□□□ -0.41
TTC39A-216ENST00000530004 FAM25GB3EWG6 89 aa12.49□□□□□ -0.41
TTC39A-216ENST00000530004 TMEM127O75204 238 aa12.49□□□□□ -0.41
TTC39A-216ENST00000530004 ZNF12P17014 697 aa12.49□□□□□ -0.41
TTC39A-216ENST00000530004 ELK1P19419 428 aa12.49□□□□□ -0.41
TTC39A-216ENST00000530004 PSMB1P20618 241 aaKnown RBP12.49□□□□□ -0.41
TTC39A-216ENST00000530004 CLDN12P56749 244 aa12.49□□□□□ -0.41
TTC39A-216ENST00000530004 FAM27E3Q08E93 113 aa12.49□□□□□ -0.41
TTC39A-216ENST00000530004 MADCAM1Q13477 382 aa12.49□□□□□ -0.41
TTC39A-216ENST00000530004 PLPP7Q8NBV4 271 aa12.49□□□□□ -0.41
TTC39A-216ENST00000530004 OR14K1Q8NGZ2 314 aa12.49□□□□□ -0.41
TTC39A-216ENST00000530004 LGALS14Q8TCE9 139 aa12.49□□□□□ -0.41
TTC39A-216ENST00000530004 SP140LQ9H930 580 aa12.49□□□□□ -0.41
TTC39A-216ENST00000530004 LIN7BQ9HAP6 207 aa12.49□□□□□ -0.41
TTC39A-216ENST00000530004 PLEKHA1Q9HB21 404 aa12.49□□□□□ -0.41
TTC39A-216ENST00000530004 CIB4A0PJX0 185 aa12.48□□□□□ -0.41
TTC39A-216ENST00000530004 RAD51DO75771 328 aa12.48□□□□□ -0.41
TTC39A-216ENST00000530004 COX5BP10606 129 aa12.48□□□□□ -0.41
TTC39A-216ENST00000530004 EVX1P49640 407 aa12.48□□□□□ -0.41
TTC39A-216ENST00000530004 SPOCK1Q08629 439 aa12.48□□□□□ -0.41
TTC39A-216ENST00000530004 TSC22D1Q15714 1073 aa12.48□□□□□ -0.41
TTC39A-216ENST00000530004 ZNF79Q15937 498 aa12.48□□□□□ -0.41
TTC39A-216ENST00000530004 LRRC28Q86X40 367 aaPredicted RBP12.48□□□□□ -0.41
TTC39A-216ENST00000530004 OR5D14Q8NGL3 314 aa12.48□□□□□ -0.41
TTC39A-216ENST00000530004 SGK3Q96BR1 496 aa12.48□□□□□ -0.41
TTC39A-216ENST00000530004 SPATA2Q9UM82 520 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms