RNA–Protein interactions for RNA: ENST00000529608.1

TGFBR3-208, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 5

Gene TGFBR3, Length 785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-208ENST00000529608 HIST1H2ABP04908 130 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 MSMBP08118 114 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 OR2T7P0C7T2 308 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 CFL1P23528 166 aaKnown RBP7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 RPL4P36578 427 aaKnown RBP7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 MAP2K6P52564 334 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 RPS7P62081 194 aaKnown RBP7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 HSF2Q03933 536 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 CRMP1Q14194 572 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 OXA1LQ15070 435 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 CEACAM16Q2WEN9 425 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 KLHL12Q53G59 568 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 AWAT1Q58HT5 328 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 C1orf140Q5VVS0 124 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 C5orf46Q6UWT4 87 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 HIST3H2AQ7L7L0 130 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 SHFQ7M4L6 423 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 ABHD12BQ7Z5M8 362 aaPredicted RBP7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 TMEM123Q8N131 208 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 ZDHHC22Q8N966 263 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 OR52E2Q8NGJ4 325 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 OR2T27Q8NH04 317 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 SGMS2Q8NHU3 365 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 GCDHQ92947 438 aaPredicted RBP7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 HIST1H2ACQ93077 130 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 MRPL24Q96A35 216 aaKnown RBP7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 SLC25A46Q96AG3 418 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 SLC25A36Q96CQ1 311 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 WDFY2Q96P53 400 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 SYT3Q9BQG1 590 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 SLC30A2Q9BRI3 323 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 CCDC32Q9BV29 185 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 ALG8Q9BVK2 526 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 OR51V1Q9H2C8 321 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 SP140LQ9H930 580 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 CRLF2Q9HC73 371 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 SMURF1Q9HCE7 757 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 TRIM36Q9NQ86 728 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 G6PC2Q9NQR9 355 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 ZNF275Q9NSD4 429 aaPredicted RBP7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 SNTG1Q9NSN8 517 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 ETAA1Q9NY74 926 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 DAPK2Q9UIK4 370 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 FZR1Q9UM11 496 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 PCDHB10Q9UN67 800 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 HIF3AQ9Y2N7 669 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 IER3IP1Q9Y5U9 82 aa7.29□□□□□ -1.24
TGFBR3-208ENST00000529608 PRKDCP78527 4128 aaKnown RBP7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 ARHGAP32A7KAX9 2087 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 IGKV1D-42A0A075B6H8 117 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 FZD7O75084 574 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 VAMP5O95183 116 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 TXNDC12O95881 172 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 CD1AP06126 327 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 NAT2P11245 290 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 ZNF35P13682 527 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 HLA-DOBP13765 273 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 HIST1H1CP16403 213 aaKnown RBP7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 ZNF14P17017 642 aaPredicted RBP7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 ADRA2CP18825 462 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 CELP19835 753 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 ACHEP22303 614 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 TNFSF8P32971 234 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 ARR3P36575 388 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 MAGEB1P43366 347 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 GPR6P46095 362 aaPredicted RBP7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 RPS5P46782 204 aaKnown RBP7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 SLC25A1P53007 311 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 DEFA1P59665 94 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 DEFA3P59666 94 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 ACTA2P62736 377 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 RPS25P62851 125 aaKnown RBP7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 ACTG2P63267 376 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 FABP5Q01469 135 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 POU3F1Q03052 451 aaPredicted RBP7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 HNRNPA0Q13151 305 aaKnown RBP7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 ZNF74Q16587 644 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 ALKBH6Q3KRA9 238 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 GPR139Q6DWJ6 353 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 C22orf42Q6IC83 251 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 FAHD2BQ6P2I3 314 aaPredicted RBP7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 NHLRC1Q6VVB1 395 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 KLBQ86Z14 1044 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 SYS1Q8N2H4 156 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 MS4A15Q8N5U1 240 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 PARP16Q8N5Y8 322 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 OR10H4Q8NGA5 316 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 FGFBP3Q8TAT2 258 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 ZNF418Q8TF45 676 aaPredicted RBP7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 KTI12Q96EK9 354 aaPredicted RBP7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 FAHD2AQ96GK7 314 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 OR2M2Q96R28 347 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 DDOQ99489 341 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 SLC6A7Q99884 636 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 HCAR1Q9BXC0 346 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 C1QTNF5Q9BXJ0 243 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 TMPRSS13Q9BYE2 586 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 BARHL1Q9BZE3 327 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 KCNN2Q9H2S1 579 aa7.28□□□□□ -1.24
TGFBR3-208ENST00000529608 MED20Q9H944 212 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms