RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 SPOPLQ6IQ16 392 aa2.54□□□□□ -2
CTR9-204ENST00000529355 RWDD4Q6NW29 188 aaKnown RBP2.54□□□□□ -2
CTR9-204ENST00000529355 CEMP1Q6PRD7 247 aaPredicted RBP2.54□□□□□ -2
CTR9-204ENST00000529355 RTL4Q6ZR62 310 aa2.54□□□□□ -2
CTR9-204ENST00000529355 COPS6Q7L5N1 327 aa2.54□□□□□ -2
CTR9-204ENST00000529355 BHLHA15Q7RTS1 189 aaPredicted RBP2.54□□□□□ -2
CTR9-204ENST00000529355 SMIM15Q7Z3B0 74 aa2.54□□□□□ -2
CTR9-204ENST00000529355 LINC00523Q86TU6 105 aa2.54□□□□□ -2
CTR9-204ENST00000529355 SETD3Q86TU7 594 aaPredicted RBP2.54□□□□□ -2
CTR9-204ENST00000529355 SLC13A5Q86YT5 568 aaPredicted RBP2.54□□□□□ -2
CTR9-204ENST00000529355 PLCZ1Q86YW0 608 aa2.54□□□□□ -2
CTR9-204ENST00000529355 TRAM1L1Q8N609 369 aa2.54□□□□□ -2
CTR9-204ENST00000529355 SPATA4Q8NEY3 305 aa2.54□□□□□ -2
CTR9-204ENST00000529355 UBA3Q8TBC4 463 aa2.54□□□□□ -2
CTR9-204ENST00000529355 NTAN1Q96AB6 310 aa2.54□□□□□ -2
CTR9-204ENST00000529355 PDXPQ96GD0 296 aa2.54□□□□□ -2
CTR9-204ENST00000529355 TMEM175Q9BSA9 504 aa2.54□□□□□ -2
CTR9-204ENST00000529355 NDFIP1Q9BT67 221 aa2.54□□□□□ -2
CTR9-204ENST00000529355 PKIBQ9C010 78 aa2.54□□□□□ -2
CTR9-204ENST00000529355 SAV1Q9H4B6 383 aaPredicted RBP2.54□□□□□ -2
CTR9-204ENST00000529355 C11orf49Q9H6J7 331 aa2.54□□□□□ -2
CTR9-204ENST00000529355 TDRD3Q9H7E2 651 aaKnown RBP2.54□□□□□ -2
CTR9-204ENST00000529355 WFDC1Q9HC57 220 aa2.54□□□□□ -2
CTR9-204ENST00000529355 ARL2BPQ9Y2Y0 163 aa2.54□□□□□ -2
CTR9-204ENST00000529355 PRELID3BQ9Y3B1 194 aa2.54□□□□□ -2
CTR9-204ENST00000529355 PPIL1Q9Y3C6 166 aa2.54□□□□□ -2
CTR9-204ENST00000529355 PEX16Q9Y5Y5 336 aa2.54□□□□□ -2
CTR9-204ENST00000529355 CHD5Q8TDI0 1954 aa2.54□□□□□ -2
CTR9-204ENST00000529355 PLB1Q6P1J6 1458 aa2.53□□□□□ -2
CTR9-204ENST00000529355 FANCD2Q9BXW9 1451 aa2.53□□□□□ -2
CTR9-204ENST00000529355 TNS2Q63HR2 1409 aa2.53□□□□□ -2
CTR9-204ENST00000529355 FMN1Q68DA7 1419 aa2.53□□□□□ -2
CTR9-204ENST00000529355 CNTNAP1P78357 1384 aa2.53□□□□□ -2
CTR9-204ENST00000529355 DHX57Q6P158 1386 aaKnown RBP2.53□□□□□ -2
CTR9-204ENST00000529355 NRCAMQ92823 1304 aa2.53□□□□□ -2
CTR9-204ENST00000529355 MYH4Q9Y623 1939 aa2.53□□□□□ -2
CTR9-204ENST00000529355 A0A0A6YYH2 397 aa2.53□□□□□ -2
CTR9-204ENST00000529355 RAB19A4D1S5 217 aa2.53□□□□□ -2
CTR9-204ENST00000529355 A6NJ64 397 aa2.53□□□□□ -2
CTR9-204ENST00000529355 FAM25AB3EWG3 89 aa2.53□□□□□ -2
CTR9-204ENST00000529355 FAM25CB3EWG5 89 aa2.53□□□□□ -2
CTR9-204ENST00000529355 FAM25GB3EWG6 89 aa2.53□□□□□ -2
CTR9-204ENST00000529355 H3BQF6 201 aa2.53□□□□□ -2
CTR9-204ENST00000529355 DNALI1O14645 258 aaPredicted RBP2.53□□□□□ -2
CTR9-204ENST00000529355 TOR1AO14656 332 aa2.53□□□□□ -2
CTR9-204ENST00000529355 ITGB1BP1O14713 200 aa2.53□□□□□ -2
CTR9-204ENST00000529355 CLOCKO15516 846 aa2.53□□□□□ -2
CTR9-204ENST00000529355 RRP8O43159 456 aaKnown RBP2.53□□□□□ -2
CTR9-204ENST00000529355 PSTPIP1O43586 416 aa2.53□□□□□ -2
CTR9-204ENST00000529355 CALUO43852 315 aaPredicted RBP2.53□□□□□ -2
CTR9-204ENST00000529355 CST8O60676 142 aa2.53□□□□□ -2
CTR9-204ENST00000529355 WBP4O75554 376 aaKnown RBP2.53□□□□□ -2
CTR9-204ENST00000529355 CTAG2O75638 210 aa2.53□□□□□ -2
CTR9-204ENST00000529355 EIF3GO75821 320 aaKnown RBP eCLIP2.53□□□□□ -2
CTR9-204ENST00000529355 CCNKO75909 580 aa2.53□□□□□ -2
CTR9-204ENST00000529355 TGM6O95932 706 aa2.53□□□□□ -2
CTR9-204ENST00000529355 MBP02144 154 aa2.53□□□□□ -2
CTR9-204ENST00000529355 FABP3P05413 133 aa2.53□□□□□ -2
CTR9-204ENST00000529355 CRYGCP07315 174 aa2.53□□□□□ -2
CTR9-204ENST00000529355 ADRA2AP08913 450 aa2.53□□□□□ -2
CTR9-204ENST00000529355 TFPTP0C1Z6 253 aa2.53□□□□□ -2
CTR9-204ENST00000529355 OR4E1P0C645 316 aa2.53□□□□□ -2
CTR9-204ENST00000529355 TCP1P17987 556 aaKnown RBP2.53□□□□□ -2
CTR9-204ENST00000529355 PRPS1L1P21108 318 aa2.53□□□□□ -2
CTR9-204ENST00000529355 CCNOP22674 350 aa2.53□□□□□ -2
CTR9-204ENST00000529355 WARSP23381 471 aaKnown RBP2.53□□□□□ -2
CTR9-204ENST00000529355 S100PP25815 95 aa2.53□□□□□ -2
CTR9-204ENST00000529355 AK4P27144 223 aaPredicted RBP2.53□□□□□ -2
CTR9-204ENST00000529355 MAS1LP35410 378 aa2.53□□□□□ -2
CTR9-204ENST00000529355 CDKN2BP42772 138 aa2.53□□□□□ -2
CTR9-204ENST00000529355 CRATP43155 626 aa2.53□□□□□ -2
CTR9-204ENST00000529355 MAGEA2P43356 314 aa2.53□□□□□ -2
CTR9-204ENST00000529355 MAGEA6P43360 314 aa2.53□□□□□ -2
CTR9-204ENST00000529355 CEBPDP49716 269 aaPredicted RBP2.53□□□□□ -2
CTR9-204ENST00000529355 ACTR3P61158 418 aa2.53□□□□□ -2
CTR9-204ENST00000529355 RPL26P61254 145 aaKnown RBP2.53□□□□□ -2
CTR9-204ENST00000529355 NUTF2P61970 127 aaKnown RBP2.53□□□□□ -2
CTR9-204ENST00000529355 FLI1Q01543 452 aaPredicted RBP2.53□□□□□ -2
CTR9-204ENST00000529355 LIPEQ05469 1076 aa2.53□□□□□ -2
CTR9-204ENST00000529355 ZNF33AQ06730 810 aa2.53□□□□□ -2
CTR9-204ENST00000529355 SYCNQ0VAF6 134 aa2.53□□□□□ -2
CTR9-204ENST00000529355 MERTKQ12866 999 aa2.53□□□□□ -2
CTR9-204ENST00000529355 ZNF836Q6ZNA1 936 aa2.53□□□□□ -2
CTR9-204ENST00000529355 PLEKHG7Q6ZR37 379 aa2.53□□□□□ -2
CTR9-204ENST00000529355 FAM228AQ86W67 206 aa2.53□□□□□ -2
CTR9-204ENST00000529355 GID4Q8IVV7 300 aa2.53□□□□□ -2
CTR9-204ENST00000529355 RIMKLAQ8IXN7 391 aa2.53□□□□□ -2
CTR9-204ENST00000529355 KIF2BQ8N4N8 673 aa2.53□□□□□ -2
CTR9-204ENST00000529355 OR8J2Q8NGG1 315 aa2.53□□□□□ -2
CTR9-204ENST00000529355 AKR7LQ8NHP1 331 aa2.53□□□□□ -2
CTR9-204ENST00000529355 TSEN15Q8WW01 171 aaKnown RBP2.53□□□□□ -2
CTR9-204ENST00000529355 ING5Q8WYH8 240 aa2.53□□□□□ -2
CTR9-204ENST00000529355 FBXO32Q969P5 355 aa2.53□□□□□ -2
CTR9-204ENST00000529355 CPNE4Q96A23 557 aaPredicted RBP2.53□□□□□ -2
CTR9-204ENST00000529355 ISG20Q96AZ6 181 aaKnown RBP2.53□□□□□ -2
CTR9-204ENST00000529355 C9orf72Q96LT7 481 aa2.53□□□□□ -2
CTR9-204ENST00000529355 CSPG4P5Q96PW8 444 aa2.53□□□□□ -2
CTR9-204ENST00000529355 KIFC1Q9BW19 673 aa2.53□□□□□ -2
CTR9-204ENST00000529355 BBS2Q9BXC9 721 aa2.53□□□□□ -2
CTR9-204ENST00000529355 ZYG11BQ9C0D3 744 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms