RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 PTAFRP25105 342 aa21.28■■□□□ 1
LDLRAD3-203ENST00000528989 PPP1CBP62140 327 aa21.28■■□□□ 1
LDLRAD3-203ENST00000528989 SSX8Q7RTT4 187 aa21.28■■□□□ 1
LDLRAD3-203ENST00000528989 TSEN15Q8WW01 171 aaKnown RBP21.28■■□□□ 1
LDLRAD3-203ENST00000528989 DACH2Q96NX9 599 aa21.28■■□□□ 1
LDLRAD3-203ENST00000528989 SP140LQ9H930 580 aa21.28■■□□□ 1
LDLRAD3-203ENST00000528989 TXNL4BQ9NX01 149 aaKnown RBP21.28■■□□□ 1
LDLRAD3-203ENST00000528989 UTP20O75691 2785 aaKnown RBP21.28■■□□□ 1
LDLRAD3-203ENST00000528989 TRBV5-5A0A0J9YX44 114 aa21.28■■□□□ 1
LDLRAD3-203ENST00000528989 A0A1B0GVI7 797 aa21.28■■□□□ 1
LDLRAD3-203ENST00000528989 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP21.28■■□□□ 1
LDLRAD3-203ENST00000528989 RGS9O75916 674 aaPredicted RBP21.28■■□□□ 1
LDLRAD3-203ENST00000528989 ACHEP22303 614 aa21.28■■□□□ 1
LDLRAD3-203ENST00000528989 VBP1P61758 197 aa21.28■■□□□ 1
LDLRAD3-203ENST00000528989 NCS1P62166 190 aa21.28■■□□□ 1
LDLRAD3-203ENST00000528989 NGBQ9NPG2 151 aa21.28■■□□□ 1
LDLRAD3-203ENST00000528989 FZR1Q9UM11 496 aa21.28■■□□□ 1
LDLRAD3-203ENST00000528989 TRDV1A0A1B0GX56 115 aa21.27■■□□□ 1
LDLRAD3-203ENST00000528989 ZNF879B4DU55 563 aa21.27■■□□□ 1
LDLRAD3-203ENST00000528989 PIN1P1O15428 100 aa21.27■■□□□ 1
LDLRAD3-203ENST00000528989 CCL1P22362 96 aa21.27■■□□□ 1
LDLRAD3-203ENST00000528989 ACKR3P25106 362 aa21.27■■□□□ 1
LDLRAD3-203ENST00000528989 RAD52P43351 418 aa21.27■■□□□ 1
LDLRAD3-203ENST00000528989 KIR2DL3P43628 341 aa21.27■■□□□ 1
LDLRAD3-203ENST00000528989 FAM3AP98173 230 aa21.27■■□□□ 1
LDLRAD3-203ENST00000528989 Q499Y3 187 aa21.27■■□□□ 1
LDLRAD3-203ENST00000528989 ZMAT1Q5H9K5 638 aa21.27■■□□□ 1
LDLRAD3-203ENST00000528989 PLPP7Q8NBV4 271 aa21.27■■□□□ 1
LDLRAD3-203ENST00000528989 OR13C3Q8NGS6 347 aa21.27■■□□□ 1
LDLRAD3-203ENST00000528989 SLC25A40Q8TBP6 338 aa21.27■■□□□ 1
LDLRAD3-203ENST00000528989 SSC4DQ8WTU2 575 aa21.27■■□□□ 1
LDLRAD3-203ENST00000528989 TMEM106AQ96A25 262 aa21.27■■□□□ 1
LDLRAD3-203ENST00000528989 SPSB4Q96A44 273 aa21.27■■□□□ 1
LDLRAD3-203ENST00000528989 ISOC1Q96CN7 298 aa21.27■■□□□ 1
LDLRAD3-203ENST00000528989 REPIN1Q9BWE0 567 aaKnown RBP21.27■■□□□ 1
LDLRAD3-203ENST00000528989 SSR3Q9UNL2 185 aa21.27■■□□□ 1
LDLRAD3-203ENST00000528989 TENM4Q6N022 2769 aa21.26■□□□□ 0.99
LDLRAD3-203ENST00000528989 XRCC2O43543 280 aa21.26■□□□□ 0.99
LDLRAD3-203ENST00000528989 GABARAPO95166 117 aa21.26■□□□□ 0.99
LDLRAD3-203ENST00000528989 MALLQ13021 153 aa21.26■□□□□ 0.99
LDLRAD3-203ENST00000528989 NCMAPQ5T1S8 102 aa21.26■□□□□ 0.99
LDLRAD3-203ENST00000528989 ADAM5Q6NVV9 412 aa21.26■□□□□ 0.99
LDLRAD3-203ENST00000528989 OR14K1Q8NGZ2 314 aa21.26■□□□□ 0.99
LDLRAD3-203ENST00000528989 NOX4Q9NPH5 578 aa21.26■□□□□ 0.99
LDLRAD3-203ENST00000528989 DHDHQ9UQ10 334 aa21.26■□□□□ 0.99
LDLRAD3-203ENST00000528989 LRRK2Q5S007 2527 aa21.26■□□□□ 0.99
LDLRAD3-203ENST00000528989 IGFBP2P18065 325 aa21.26■□□□□ 0.99
LDLRAD3-203ENST00000528989 GSK3AP49840 483 aa21.26■□□□□ 0.99
LDLRAD3-203ENST00000528989 SNTB2Q13425 540 aaKnown RBP21.26■□□□□ 0.99
LDLRAD3-203ENST00000528989 TRAM1Q15629 374 aa21.26■□□□□ 0.99
LDLRAD3-203ENST00000528989 MSMPQ1L6U9 139 aa21.26■□□□□ 0.99
LDLRAD3-203ENST00000528989 DMRTC1Q5HYR2 192 aa21.26■□□□□ 0.99
LDLRAD3-203ENST00000528989 TMEM255AQ5JRV8 349 aa21.26■□□□□ 0.99
LDLRAD3-203ENST00000528989 SLC22A25Q6T423 547 aa21.26■□□□□ 0.99
LDLRAD3-203ENST00000528989 UNQ9370/PRO34162Q6UXP9 181 aa21.26■□□□□ 0.99
LDLRAD3-203ENST00000528989 PGAP1Q75T13 922 aa21.26■□□□□ 0.99
LDLRAD3-203ENST00000528989 DOK3Q7L591 496 aa21.26■□□□□ 0.99
LDLRAD3-203ENST00000528989 OR5L1Q8NGL2 311 aa21.26■□□□□ 0.99
LDLRAD3-203ENST00000528989 FGGYQ96C11 551 aa21.26■□□□□ 0.99
LDLRAD3-203ENST00000528989 ADAT3Q96EY9 351 aaPredicted RBP21.26■□□□□ 0.99
LDLRAD3-203ENST00000528989 DERL3Q96Q80 235 aa21.26■□□□□ 0.99
LDLRAD3-203ENST00000528989 BATF3Q9NR55 127 aa21.26■□□□□ 0.99
LDLRAD3-203ENST00000528989 ZNF275Q9NSD4 429 aaPredicted RBP21.26■□□□□ 0.99
LDLRAD3-203ENST00000528989 ROS1P08922 2347 aa21.26■□□□□ 0.99
LDLRAD3-203ENST00000528989 hCG_38984A0A1B0GV85 526 aa21.25■□□□□ 0.99
LDLRAD3-203ENST00000528989 CASKO14936 926 aa21.25■□□□□ 0.99
LDLRAD3-203ENST00000528989 TMBIM6P55061 237 aa21.25■□□□□ 0.99
LDLRAD3-203ENST00000528989 ASPHD2Q6ICH7 369 aa21.25■□□□□ 0.99
LDLRAD3-203ENST00000528989 VHLLQ6RSH7 139 aa21.25■□□□□ 0.99
LDLRAD3-203ENST00000528989 MARS2Q96GW9 593 aaKnown RBP21.25■□□□□ 0.99
LDLRAD3-203ENST00000528989 ESRP2Q9H6T0 727 aaKnown RBP21.25■□□□□ 0.99
LDLRAD3-203ENST00000528989 SMIM31A0A1B0GVY4 71 aa21.24■□□□□ 0.99
LDLRAD3-203ENST00000528989 SHISA3A0PJX4 238 aa21.24■□□□□ 0.99
LDLRAD3-203ENST00000528989 DEFB108AA8MXU0 73 aa21.24■□□□□ 0.99
LDLRAD3-203ENST00000528989 DHRS3O75911 302 aa21.24■□□□□ 0.99
LDLRAD3-203ENST00000528989 SERPINA3P01011 423 aa21.24■□□□□ 0.99
LDLRAD3-203ENST00000528989 MPV17P39210 176 aa21.24■□□□□ 0.99
LDLRAD3-203ENST00000528989 FABP6P51161 128 aa21.24■□□□□ 0.99
LDLRAD3-203ENST00000528989 NKX6-1P78426 367 aaPredicted RBP21.24■□□□□ 0.99
LDLRAD3-203ENST00000528989 TIMM50Q3ZCQ8 353 aa21.24■□□□□ 0.99
LDLRAD3-203ENST00000528989 DMRTC2Q8IXT2 367 aaPredicted RBP21.24■□□□□ 0.99
LDLRAD3-203ENST00000528989 KLF14Q8TD94 323 aaPredicted RBP21.24■□□□□ 0.99
LDLRAD3-203ENST00000528989 CMBLQ96DG6 245 aa21.24■□□□□ 0.99
LDLRAD3-203ENST00000528989 HS3ST6Q96QI5 342 aa21.24■□□□□ 0.99
LDLRAD3-203ENST00000528989 RGCCQ9H4X1 137 aa21.24■□□□□ 0.99
LDLRAD3-203ENST00000528989 PPP1R3EQ9H7J1 279 aa21.24■□□□□ 0.99
LDLRAD3-203ENST00000528989 PLAUP00749 431 aa21.24■□□□□ 0.99
LDLRAD3-203ENST00000528989 FAHP16930 419 aa21.24■□□□□ 0.99
LDLRAD3-203ENST00000528989 CALRP27797 417 aaKnown RBP21.24■□□□□ 0.99
LDLRAD3-203ENST00000528989 FGF9P31371 208 aaPredicted RBP21.24■□□□□ 0.99
LDLRAD3-203ENST00000528989 MRPL21Q7Z2W9 205 aaKnown RBP21.24■□□□□ 0.99
LDLRAD3-203ENST00000528989 AKAP1Q92667 903 aaKnown RBP eCLIP21.24■□□□□ 0.99
LDLRAD3-203ENST00000528989 C12orf43Q96C57 262 aaKnown RBP21.24■□□□□ 0.99
LDLRAD3-203ENST00000528989 BCL2L14Q9BZR8 327 aa21.24■□□□□ 0.99
LDLRAD3-203ENST00000528989 PIGLQ9Y2B2 252 aa21.24■□□□□ 0.99
LDLRAD3-203ENST00000528989 V9GYS6 101 aa21.24■□□□□ 0.99
LDLRAD3-203ENST00000528989 H3BMQ9 156 aa21.23■□□□□ 0.99
LDLRAD3-203ENST00000528989 LILRA1O75019 489 aa21.23■□□□□ 0.99
LDLRAD3-203ENST00000528989 ALKBH6Q3KRA9 238 aa21.23■□□□□ 0.99
LDLRAD3-203ENST00000528989 OR2T2Q6IF00 324 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms