RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 TBC1D23Q9NUY8 699 aa7.16□□□□□ -1.26
SSBP3-212ENST00000528930 CYB5R1Q9UHQ9 305 aa7.16□□□□□ -1.26
SSBP3-212ENST00000528930 ATPIF1Q9UII2 106 aa7.16□□□□□ -1.26
SSBP3-212ENST00000528930 GPR160Q9UJ42 338 aa7.16□□□□□ -1.26
SSBP3-212ENST00000528930 STARD10Q9Y365 291 aa7.16□□□□□ -1.26
SSBP3-212ENST00000528930 GRIP1Q9Y3R0 1128 aa7.16□□□□□ -1.26
SSBP3-212ENST00000528930 LRP5LA4QPB2 252 aa7.15□□□□□ -1.26
SSBP3-212ENST00000528930 ZSCAN5BA6NJL1 495 aa7.15□□□□□ -1.26
SSBP3-212ENST00000528930 H3BSA7 217 aa7.15□□□□□ -1.26
SSBP3-212ENST00000528930 ABHD16AO95870 558 aa7.15□□□□□ -1.26
SSBP3-212ENST00000528930 IGHV1-46P01743 117 aa7.15□□□□□ -1.26
SSBP3-212ENST00000528930 ADH4P08319 380 aa7.15□□□□□ -1.26
SSBP3-212ENST00000528930 PSKH1P11801 424 aa7.15□□□□□ -1.26
SSBP3-212ENST00000528930 HOXB6P17509 224 aaKnown RBP7.15□□□□□ -1.26
SSBP3-212ENST00000528930 KITLGP21583 273 aa7.15□□□□□ -1.26
SSBP3-212ENST00000528930 ACHEP22303 614 aa7.15□□□□□ -1.26
SSBP3-212ENST00000528930 TUBG1P23258 451 aa7.15□□□□□ -1.26
SSBP3-212ENST00000528930 IL2RGP31785 369 aa7.15□□□□□ -1.26
SSBP3-212ENST00000528930 PYCR1P32322 319 aa7.15□□□□□ -1.26
SSBP3-212ENST00000528930 CRYBB2P43320 205 aa7.15□□□□□ -1.26
SSBP3-212ENST00000528930 ARHGDIAP52565 204 aa7.15□□□□□ -1.26
SSBP3-212ENST00000528930 TMEM33P57088 247 aa7.15□□□□□ -1.26
SSBP3-212ENST00000528930 UBA52P62987 128 aaKnown RBP7.15□□□□□ -1.26
SSBP3-212ENST00000528930 CCL8P80075 99 aa7.15□□□□□ -1.26
SSBP3-212ENST00000528930 MRPS11P82912 194 aaKnown RBP7.15□□□□□ -1.26
SSBP3-212ENST00000528930 CRMP1Q14194 572 aa7.15□□□□□ -1.26
SSBP3-212ENST00000528930 PCGF3Q3KNV8 242 aa7.15□□□□□ -1.26
SSBP3-212ENST00000528930 SLC36A3Q495N2 470 aa7.15□□□□□ -1.26
SSBP3-212ENST00000528930 ARL9Q6T311 187 aa7.15□□□□□ -1.26
SSBP3-212ENST00000528930 UNQ6126/PRO20091Q6UXV3 157 aa7.15□□□□□ -1.26
SSBP3-212ENST00000528930 CFAP77Q6ZQR2 320 aa7.15□□□□□ -1.26
SSBP3-212ENST00000528930 LINC00346Q8IVM7 164 aa7.15□□□□□ -1.26
SSBP3-212ENST00000528930 HS3ST5Q8IZT8 346 aa7.15□□□□□ -1.26
SSBP3-212ENST00000528930 OR2T33Q8NG76 320 aa7.15□□□□□ -1.26
SSBP3-212ENST00000528930 CHPT1Q8WUD6 406 aa7.15□□□□□ -1.26
SSBP3-212ENST00000528930 SNX33Q8WV41 574 aa7.15□□□□□ -1.26
SSBP3-212ENST00000528930 CMBLQ96DG6 245 aa7.15□□□□□ -1.26
SSBP3-212ENST00000528930 RBMXL1Q96E39 390 aaKnown RBP7.15□□□□□ -1.26
SSBP3-212ENST00000528930 MAP6Q96JE9 813 aa7.15□□□□□ -1.26
SSBP3-212ENST00000528930 DCLRE1CQ96SD1 692 aaKnown RBP7.15□□□□□ -1.26
SSBP3-212ENST00000528930 HDHD2Q9H0R4 259 aa7.15□□□□□ -1.26
SSBP3-212ENST00000528930 NTN4Q9HB63 628 aa7.15□□□□□ -1.26
SSBP3-212ENST00000528930 PNRC2Q9NPJ4 139 aaKnown RBP7.15□□□□□ -1.26
SSBP3-212ENST00000528930 TUBG2Q9NRH3 451 aa7.15□□□□□ -1.26
SSBP3-212ENST00000528930 ZNF275Q9NSD4 429 aaPredicted RBP7.15□□□□□ -1.26
SSBP3-212ENST00000528930 ARMC1Q9NVT9 282 aa7.15□□□□□ -1.26
SSBP3-212ENST00000528930 BAIAP2Q9UQB8 552 aa7.15□□□□□ -1.26
SSBP3-212ENST00000528930 AP4S1Q9Y587 144 aa7.15□□□□□ -1.26
SSBP3-212ENST00000528930 A0A087WXM4 84 aa7.14□□□□□ -1.27
SSBP3-212ENST00000528930 TVP23AA6NH52 213 aa7.14□□□□□ -1.27
SSBP3-212ENST00000528930 GNGT2O14610 69 aa7.14□□□□□ -1.27
SSBP3-212ENST00000528930 WNT9BO14905 357 aa7.14□□□□□ -1.27
SSBP3-212ENST00000528930 CDC14BO60729 498 aa7.14□□□□□ -1.27
SSBP3-212ENST00000528930 CLUP10909 449 aa7.14□□□□□ -1.27
SSBP3-212ENST00000528930 PRKACGP22612 351 aa7.14□□□□□ -1.27
SSBP3-212ENST00000528930 LIPAP38571 399 aa7.14□□□□□ -1.27
SSBP3-212ENST00000528930 RPS27P42677 84 aaKnown RBP7.14□□□□□ -1.27
SSBP3-212ENST00000528930 GPR6P46095 362 aaPredicted RBP7.14□□□□□ -1.27
SSBP3-212ENST00000528930 ERFP50548 548 aa7.14□□□□□ -1.27
SSBP3-212ENST00000528930 ZNF81P51508 661 aa7.14□□□□□ -1.27
SSBP3-212ENST00000528930 SLC25A1P53007 311 aa7.14□□□□□ -1.27
SSBP3-212ENST00000528930 ESRRGP62508 458 aa7.14□□□□□ -1.27
SSBP3-212ENST00000528930 TSTQ16762 297 aaKnown RBP7.14□□□□□ -1.27
SSBP3-212ENST00000528930 PCK2Q16822 640 aa7.14□□□□□ -1.27
SSBP3-212ENST00000528930 SPRNQ5BIV9 151 aa7.14□□□□□ -1.27
SSBP3-212ENST00000528930 FAM209AQ5JX71 171 aa7.14□□□□□ -1.27
SSBP3-212ENST00000528930 LINC01590Q5TEZ4 76 aa7.14□□□□□ -1.27
SSBP3-212ENST00000528930 ACSM5Q6NUN0 579 aa7.14□□□□□ -1.27
SSBP3-212ENST00000528930 COLCA1Q6ZS62 124 aa7.14□□□□□ -1.27
SSBP3-212ENST00000528930 NAA40Q86UY6 237 aa7.14□□□□□ -1.27
SSBP3-212ENST00000528930 IQCF1Q8N6M8 205 aa7.14□□□□□ -1.27
SSBP3-212ENST00000528930 TSPAN14Q8NG11 270 aa7.14□□□□□ -1.27
SSBP3-212ENST00000528930 OR51L1Q8NGJ5 315 aa7.14□□□□□ -1.27
SSBP3-212ENST00000528930 OR10S1Q8NGN2 331 aa7.14□□□□□ -1.27
SSBP3-212ENST00000528930 OR9Q1Q8NGQ5 310 aa7.14□□□□□ -1.27
SSBP3-212ENST00000528930 OR2T4Q8NH00 348 aa7.14□□□□□ -1.27
SSBP3-212ENST00000528930 PTP4A1Q93096 173 aa7.14□□□□□ -1.27
SSBP3-212ENST00000528930 HAVCR1Q96D42 359 aa7.14□□□□□ -1.27
SSBP3-212ENST00000528930 CDADC1Q9BWV3 514 aa7.14□□□□□ -1.27
SSBP3-212ENST00000528930 HCAR1Q9BXC0 346 aa7.14□□□□□ -1.27
SSBP3-212ENST00000528930 WDR76Q9H967 626 aa7.14□□□□□ -1.27
SSBP3-212ENST00000528930 MSL2Q9HCI7 577 aa7.14□□□□□ -1.27
SSBP3-212ENST00000528930 CMC2Q9NRP2 79 aa7.14□□□□□ -1.27
SSBP3-212ENST00000528930 CYSLTR2Q9NS75 346 aa7.14□□□□□ -1.27
SSBP3-212ENST00000528930 PDP1Q9P0J1 537 aaPredicted RBP7.14□□□□□ -1.27
SSBP3-212ENST00000528930 DNAJB9Q9UBS3 223 aa7.14□□□□□ -1.27
SSBP3-212ENST00000528930 CGGBP1Q9UFW8 167 aaPredicted RBP7.14□□□□□ -1.27
SSBP3-212ENST00000528930 PURGQ9UJV8 347 aaKnown RBP7.14□□□□□ -1.27
SSBP3-212ENST00000528930 POLR1DQ9Y2S0 133 aa7.14□□□□□ -1.27
SSBP3-212ENST00000528930 CACNG2Q9Y698 323 aa7.14□□□□□ -1.27
SSBP3-212ENST00000528930 IGHV1-69-2A0A0G2JMI3 117 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 PLSCR5A0PG75 271 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 H3BN98 237 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 SLC22A1O15245 554 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 SPRY3O43610 288 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 HLA-DQA2P01906 255 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 MT-ND5P03915 603 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 GYPBP06028 91 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 CD55P08174 381 aa7.13□□□□□ -1.27
SSBP3-212ENST00000528930 ACSM4P0C7M7 580 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms