RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	PTCRA	Q6ISU1	281 aa	Predicted RBP	20.71	■□□□□ 0.91
GSDMD-208	ENST00000528475	ARRDC1	Q8N5I2	433 aa		20.71	■□□□□ 0.91
GSDMD-208	ENST00000528475	OR8B12	Q8NGG6	310 aa		20.71	■□□□□ 0.91
GSDMD-208	ENST00000528475	OR6X1	Q8NH79	312 aa		20.71	■□□□□ 0.91
GSDMD-208	ENST00000528475	CASTOR1	Q8WTX7	329 aa		20.71	■□□□□ 0.91
GSDMD-208	ENST00000528475	PHF7	Q9BWX1	381 aa	Predicted RBP	20.71	■□□□□ 0.91
GSDMD-208	ENST00000528475	NMES1	Q9C002	83 aa		20.71	■□□□□ 0.91
GSDMD-208	ENST00000528475	MBD2	Q9UBB5	411 aa		20.71	■□□□□ 0.91
GSDMD-208	ENST00000528475	POLR1D	Q9Y2S0	133 aa		20.71	■□□□□ 0.91
GSDMD-208	ENST00000528475	TMEM265	A0A087WTH1	108 aa		20.7	■□□□□ 0.9
GSDMD-208	ENST00000528475	FAM25E	A8MYX2	175 aa		20.7	■□□□□ 0.9
GSDMD-208	ENST00000528475	APOC3	P02656	99 aa		20.7	■□□□□ 0.9
GSDMD-208	ENST00000528475	PMP2	P02689	132 aa		20.7	■□□□□ 0.9
GSDMD-208	ENST00000528475	MYF5	P13349	255 aa		20.7	■□□□□ 0.9
GSDMD-208	ENST00000528475	HIST1H1D	P16402	221 aa	Known RBP	20.7	■□□□□ 0.9
GSDMD-208	ENST00000528475	AKR1C4	P17516	323 aa		20.7	■□□□□ 0.9
GSDMD-208	ENST00000528475	PSMB6	P28072	239 aa		20.7	■□□□□ 0.9
GSDMD-208	ENST00000528475	ATXN7L3	Q14CW9	347 aa	Predicted RBP	20.7	■□□□□ 0.9
GSDMD-208	ENST00000528475	UQCC3	Q6UW78	93 aa		20.7	■□□□□ 0.9
GSDMD-208	ENST00000528475	CCDC36	Q8IYA8	594 aa		20.7	■□□□□ 0.9
GSDMD-208	ENST00000528475	TERB2	Q8NHR7	220 aa		20.7	■□□□□ 0.9
GSDMD-208	ENST00000528475	STOML3	Q8TAV4	291 aa		20.7	■□□□□ 0.9
GSDMD-208	ENST00000528475	PIGM	Q9H3S5	423 aa		20.7	■□□□□ 0.9
GSDMD-208	ENST00000528475	CA14	Q9ULX7	337 aa		20.7	■□□□□ 0.9
GSDMD-208	ENST00000528475	PRELID1	Q9Y255	219 aa		20.7	■□□□□ 0.9
GSDMD-208	ENST00000528475	WIF1	Q9Y5W5	379 aa		20.7	■□□□□ 0.9
GSDMD-208	ENST00000528475	CDC14B	O60729	498 aa		20.69	■□□□□ 0.9
GSDMD-208	ENST00000528475	ABO	P16442	354 aa		20.69	■□□□□ 0.9
GSDMD-208	ENST00000528475	GABRE	P78334	506 aa		20.69	■□□□□ 0.9
GSDMD-208	ENST00000528475	CYCS	P99999	105 aa	Known RBP	20.69	■□□□□ 0.9
GSDMD-208	ENST00000528475	ACY1	Q03154	408 aa		20.69	■□□□□ 0.9
GSDMD-208	ENST00000528475	EIF3I	Q13347	325 aa	Known RBP	20.69	■□□□□ 0.9
GSDMD-208	ENST00000528475	BEX5	Q5H9J7	111 aa		20.69	■□□□□ 0.9
GSDMD-208	ENST00000528475	KCTD9	Q7L273	389 aa		20.69	■□□□□ 0.9
GSDMD-208	ENST00000528475	SLC38A9	Q8NBW4	561 aa		20.69	■□□□□ 0.9
GSDMD-208	ENST00000528475	TMEM185A	Q8NFB2	350 aa		20.69	■□□□□ 0.9
GSDMD-208	ENST00000528475	MARCH1	Q8TCQ1	289 aa		20.69	■□□□□ 0.9
GSDMD-208	ENST00000528475	RAB3C	Q96E17	227 aa		20.69	■□□□□ 0.9
GSDMD-208	ENST00000528475	CDC6	Q99741	560 aa		20.69	■□□□□ 0.9
GSDMD-208	ENST00000528475	SEC61A2	Q9H9S3	476 aa		20.69	■□□□□ 0.9
GSDMD-208	ENST00000528475	PNRC2	Q9NPJ4	139 aa	Known RBP	20.69	■□□□□ 0.9
GSDMD-208	ENST00000528475	PHF3	Q92576	2039 aa	Known RBP	20.69	■□□□□ 0.9
GSDMD-208	ENST00000528475		A0A0B4J2A0	478 aa		20.69	■□□□□ 0.9
GSDMD-208	ENST00000528475		F8VVB4	439 aa		20.69	■□□□□ 0.9
GSDMD-208	ENST00000528475		F8VWA3	439 aa		20.69	■□□□□ 0.9
GSDMD-208	ENST00000528475	TOR1A	O14656	332 aa		20.69	■□□□□ 0.9
GSDMD-208	ENST00000528475	BCKDHB	P21953	392 aa		20.69	■□□□□ 0.9
GSDMD-208	ENST00000528475	ZNF121	P58317	390 aa	Predicted RBP	20.69	■□□□□ 0.9
GSDMD-208	ENST00000528475	HIST3H3	Q16695	136 aa		20.69	■□□□□ 0.9
GSDMD-208	ENST00000528475	MICB	Q29980	383 aa		20.69	■□□□□ 0.9
GSDMD-208	ENST00000528475	TMEM128	Q5BJH2	165 aa		20.69	■□□□□ 0.9
GSDMD-208	ENST00000528475	PLAC9	Q5JTB6	97 aa		20.69	■□□□□ 0.9
GSDMD-208	ENST00000528475	TMEM71	Q6P5X7	295 aa		20.69	■□□□□ 0.9
GSDMD-208	ENST00000528475	DNASE2B	Q8WZ79	361 aa		20.69	■□□□□ 0.9
GSDMD-208	ENST00000528475	AIFM2	Q9BRQ8	373 aa		20.69	■□□□□ 0.9
GSDMD-208	ENST00000528475	FAM117A	Q9C073	453 aa		20.69	■□□□□ 0.9
GSDMD-208	ENST00000528475	UBE2Z	Q9H832	354 aa	Predicted RBP	20.69	■□□□□ 0.9
GSDMD-208	ENST00000528475	CHMP1A	Q9HD42	196 aa	Predicted RBP	20.69	■□□□□ 0.9
GSDMD-208	ENST00000528475	SHPK	Q9UHJ6	478 aa		20.69	■□□□□ 0.9
GSDMD-208	ENST00000528475	GPR132	Q9UNW8	380 aa		20.69	■□□□□ 0.9
GSDMD-208	ENST00000528475	MPTX1	A8MV57	137 aa		20.68	■□□□□ 0.9
GSDMD-208	ENST00000528475		F5H0A9	414 aa	Predicted RBP	20.68	■□□□□ 0.9
GSDMD-208	ENST00000528475	ELP2	Q6IA86	826 aa		20.68	■□□□□ 0.9
GSDMD-208	ENST00000528475	ATRAID	Q6UW56	229 aa		20.68	■□□□□ 0.9
GSDMD-208	ENST00000528475	RNF144B	Q7Z419	303 aa		20.68	■□□□□ 0.9
GSDMD-208	ENST00000528475	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	20.68	■□□□□ 0.9
GSDMD-208	ENST00000528475	RTN4RL2	Q86UN3	420 aa		20.68	■□□□□ 0.9
GSDMD-208	ENST00000528475	TMEM104	Q8NE00	496 aa		20.68	■□□□□ 0.9
GSDMD-208	ENST00000528475	SSC4D	Q8WTU2	575 aa		20.68	■□□□□ 0.9
GSDMD-208	ENST00000528475	OXGR1	Q96P68	337 aa		20.68	■□□□□ 0.9
GSDMD-208	ENST00000528475	OCSTAMP	Q9BR26	566 aa		20.68	■□□□□ 0.9
GSDMD-208	ENST00000528475	GPR84	Q9NQS5	396 aa		20.68	■□□□□ 0.9
GSDMD-208	ENST00000528475	ZC4H2	Q9NQZ6	224 aa		20.68	■□□□□ 0.9
GSDMD-208	ENST00000528475	RAB19	A4D1S5	217 aa		20.68	■□□□□ 0.9
GSDMD-208	ENST00000528475	EEF1E1-BLOC1S5	C9J1V9	151 aa		20.68	■□□□□ 0.9
GSDMD-208	ENST00000528475	ZFAND5	O76080	213 aa		20.68	■□□□□ 0.9
GSDMD-208	ENST00000528475	MPIG6B	O95866	241 aa		20.68	■□□□□ 0.9
GSDMD-208	ENST00000528475	ZNF17	P17021	662 aa		20.68	■□□□□ 0.9
GSDMD-208	ENST00000528475	SERPINF1	P36955	418 aa		20.68	■□□□□ 0.9
GSDMD-208	ENST00000528475	MFAP5	Q13361	173 aa		20.68	■□□□□ 0.9
GSDMD-208	ENST00000528475	DOK3	Q7L591	496 aa		20.68	■□□□□ 0.9
GSDMD-208	ENST00000528475	BPIFC	Q8NFQ6	507 aa		20.68	■□□□□ 0.9
GSDMD-208	ENST00000528475	OR2M3	Q8NG83	312 aa		20.68	■□□□□ 0.9
GSDMD-208	ENST00000528475	OR2I1P	Q8NGU4	316 aa		20.68	■□□□□ 0.9
GSDMD-208	ENST00000528475	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	20.68	■□□□□ 0.9
GSDMD-208	ENST00000528475	SPAG17	Q6Q759	2223 aa		20.68	■□□□□ 0.9
GSDMD-208	ENST00000528475	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	20.67	■□□□□ 0.9
GSDMD-208	ENST00000528475	LOC102725191	A0A1B0GVB3	256 aa		20.67	■□□□□ 0.9
GSDMD-208	ENST00000528475	DNASE2	O00115	360 aa	Predicted RBP	20.67	■□□□□ 0.9
GSDMD-208	ENST00000528475	SOCS1	O15524	211 aa		20.67	■□□□□ 0.9
GSDMD-208	ENST00000528475	FGF16	O43320	207 aa		20.67	■□□□□ 0.9
GSDMD-208	ENST00000528475	ONECUT2	O95948	504 aa		20.67	■□□□□ 0.9
GSDMD-208	ENST00000528475	CBX5	P45973	191 aa		20.67	■□□□□ 0.9
GSDMD-208	ENST00000528475	OR3A4P	P47883	348 aa		20.67	■□□□□ 0.9
GSDMD-208	ENST00000528475	AFF3	P51826	1226 aa	Known RBP	20.67	■□□□□ 0.9
GSDMD-208	ENST00000528475	TMEM50B	P56557	158 aa		20.67	■□□□□ 0.9
GSDMD-208	ENST00000528475	NAAA	Q02083	359 aa		20.67	■□□□□ 0.9
GSDMD-208	ENST00000528475	OR4K17	Q8NGC6	315 aa		20.67	■□□□□ 0.9
GSDMD-208	ENST00000528475	OR5AP2	Q8NGF4	316 aa		20.67	■□□□□ 0.9
GSDMD-208	ENST00000528475	OR56B1	Q8NGI3	324 aa		20.67	■□□□□ 0.9

Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms