RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 PGAP1Q75T13 922 aa8.78□□□□□ -1
CPSF1-203ENST00000527916 C1orf87Q8N0U7 546 aa8.78□□□□□ -1
CPSF1-203ENST00000527916 TMEM86BQ8N661 226 aa8.78□□□□□ -1
CPSF1-203ENST00000527916 CYB561A3Q8NBI2 242 aa8.78□□□□□ -1
CPSF1-203ENST00000527916 PROKR2Q8NFJ6 384 aa8.78□□□□□ -1
CPSF1-203ENST00000527916 OR2T33Q8NG76 320 aa8.78□□□□□ -1
CPSF1-203ENST00000527916 OR10S1Q8NGN2 331 aa8.78□□□□□ -1
CPSF1-203ENST00000527916 FAM110DQ8TAY7 271 aaPredicted RBP8.78□□□□□ -1
CPSF1-203ENST00000527916 UPRTQ96BW1 309 aa8.78□□□□□ -1
CPSF1-203ENST00000527916 ZNF799Q96GE5 643 aa8.78□□□□□ -1
CPSF1-203ENST00000527916 TSSK6Q9BXA6 273 aa8.78□□□□□ -1
CPSF1-203ENST00000527916 TMEM165Q9HC07 324 aa8.78□□□□□ -1
CPSF1-203ENST00000527916 NOX4Q9NPH5 578 aa8.78□□□□□ -1
CPSF1-203ENST00000527916 TNFRSF19Q9NS68 423 aa8.78□□□□□ -1
CPSF1-203ENST00000527916 TBC1D23Q9NUY8 699 aa8.78□□□□□ -1
CPSF1-203ENST00000527916 LRCH1Q9Y2L9 728 aa8.78□□□□□ -1
CPSF1-203ENST00000527916 NOP16Q9Y3C1 178 aaKnown RBP8.78□□□□□ -1
CPSF1-203ENST00000527916 SAMHD1Q9Y3Z3 626 aaKnown RBP8.78□□□□□ -1
CPSF1-203ENST00000527916 TRAV40A0A0B4J280 105 aa8.77□□□□□ -1.01
CPSF1-203ENST00000527916 MDFIC2A0A1B0GVS7 189 aa8.77□□□□□ -1.01
CPSF1-203ENST00000527916 AQP12BA6NM10 295 aa8.77□□□□□ -1.01
CPSF1-203ENST00000527916 LRRC30A6NM36 301 aa8.77□□□□□ -1.01
CPSF1-203ENST00000527916 ZNF593O00488 134 aaPredicted RBP8.77□□□□□ -1.01
CPSF1-203ENST00000527916 DYNC1I1O14576 645 aa8.77□□□□□ -1.01
CPSF1-203ENST00000527916 GMDSO60547 372 aa8.77□□□□□ -1.01
CPSF1-203ENST00000527916 IFNGP01579 166 aa8.77□□□□□ -1.01
CPSF1-203ENST00000527916 CD200P41217 278 aa8.77□□□□□ -1.01
CPSF1-203ENST00000527916 ENTPD1P49961 510 aa8.77□□□□□ -1.01
CPSF1-203ENST00000527916 RELBQ01201 579 aa8.77□□□□□ -1.01
CPSF1-203ENST00000527916 DBPQ10586 325 aaPredicted RBP8.77□□□□□ -1.01
CPSF1-203ENST00000527916 PPP1R8Q12972 351 aaKnown RBP8.77□□□□□ -1.01
CPSF1-203ENST00000527916 MAB21L1Q13394 359 aa8.77□□□□□ -1.01
CPSF1-203ENST00000527916 CRMP1Q14194 572 aa8.77□□□□□ -1.01
CPSF1-203ENST00000527916 DEFB112Q30KQ8 113 aa8.77□□□□□ -1.01
CPSF1-203ENST00000527916 Q6ZPA2 131 aa8.77□□□□□ -1.01
CPSF1-203ENST00000527916 DCXRQ7Z4W1 244 aa8.77□□□□□ -1.01
CPSF1-203ENST00000527916 AQP12AQ8IXF9 295 aa8.77□□□□□ -1.01
CPSF1-203ENST00000527916 PLPP7Q8NBV4 271 aa8.77□□□□□ -1.01
CPSF1-203ENST00000527916 OR10AD1Q8NGE0 317 aa8.77□□□□□ -1.01
CPSF1-203ENST00000527916 OR4Q3Q8NH05 313 aa8.77□□□□□ -1.01
CPSF1-203ENST00000527916 ZNF420Q8TAQ5 688 aaPredicted RBP8.77□□□□□ -1.01
CPSF1-203ENST00000527916 Q8TCH9 128 aa8.77□□□□□ -1.01
CPSF1-203ENST00000527916 ZNRF4Q8WWF5 429 aa8.77□□□□□ -1.01
CPSF1-203ENST00000527916 SLCO4A1Q96BD0 722 aa8.77□□□□□ -1.01
CPSF1-203ENST00000527916 LRGUKQ96M69 825 aa8.77□□□□□ -1.01
CPSF1-203ENST00000527916 KCNJ15Q99712 375 aa8.77□□□□□ -1.01
CPSF1-203ENST00000527916 CHID1Q9BWS9 393 aa8.77□□□□□ -1.01
CPSF1-203ENST00000527916 PRDM13Q9H4Q3 707 aa8.77□□□□□ -1.01
CPSF1-203ENST00000527916 OPA3Q9H6K4 179 aa8.77□□□□□ -1.01
CPSF1-203ENST00000527916 WDR76Q9H967 626 aa8.77□□□□□ -1.01
CPSF1-203ENST00000527916 MARCH7Q9H992 704 aa8.77□□□□□ -1.01
CPSF1-203ENST00000527916 CMC2Q9NRP2 79 aa8.77□□□□□ -1.01
CPSF1-203ENST00000527916 VNN3Q9NY84 501 aa8.77□□□□□ -1.01
CPSF1-203ENST00000527916 MIOXQ9UGB7 285 aa8.77□□□□□ -1.01
CPSF1-203ENST00000527916 SOX21Q9Y651 276 aaPredicted RBP8.77□□□□□ -1.01
CPSF1-203ENST00000527916 POMT1Q9Y6A1 747 aa8.77□□□□□ -1.01
CPSF1-203ENST00000527916 COMMD3-BMI1R4GMX3 469 aa8.77□□□□□ -1.01
CPSF1-203ENST00000527916 U3KQV3 271 aa8.77□□□□□ -1.01
CPSF1-203ENST00000527916 C5orf63A6NC05 138 aa8.76□□□□□ -1.01
CPSF1-203ENST00000527916 TVP23AA6NH52 213 aa8.76□□□□□ -1.01
CPSF1-203ENST00000527916 CD300LBA8K4G0 201 aa8.76□□□□□ -1.01
CPSF1-203ENST00000527916 CEACAM18A8MTB9 384 aa8.76□□□□□ -1.01
CPSF1-203ENST00000527916 F5H5P2 479 aa8.76□□□□□ -1.01
CPSF1-203ENST00000527916 CLPXO76031 633 aa8.76□□□□□ -1.01
CPSF1-203ENST00000527916 PTBP3O95758 552 aaKnown RBP8.76□□□□□ -1.01
CPSF1-203ENST00000527916 CST1P01037 141 aa8.76□□□□□ -1.01
CPSF1-203ENST00000527916 SPI1P17947 270 aa8.76□□□□□ -1.01
CPSF1-203ENST00000527916 PMELP40967 661 aa8.76□□□□□ -1.01
CPSF1-203ENST00000527916 SLC15A1P46059 708 aa8.76□□□□□ -1.01
CPSF1-203ENST00000527916 RAD23AP54725 363 aa8.76□□□□□ -1.01
CPSF1-203ENST00000527916 SEC61A1P61619 476 aaKnown RBP8.76□□□□□ -1.01
CPSF1-203ENST00000527916 BEAN1Q3B7T3 259 aa8.76□□□□□ -1.01
CPSF1-203ENST00000527916 ZNF404Q494X3 552 aa8.76□□□□□ -1.01
CPSF1-203ENST00000527916 LINC01590Q5TEZ4 76 aa8.76□□□□□ -1.01
CPSF1-203ENST00000527916 MRPL21Q7Z2W9 205 aaKnown RBP8.76□□□□□ -1.01
CPSF1-203ENST00000527916 KLBQ86Z14 1044 aa8.76□□□□□ -1.01
CPSF1-203ENST00000527916 ADGRG5Q8IZF4 528 aa8.76□□□□□ -1.01
CPSF1-203ENST00000527916 SPERTQ8NA61 448 aa8.76□□□□□ -1.01
CPSF1-203ENST00000527916 ZNF511Q8NB15 262 aa8.76□□□□□ -1.01
CPSF1-203ENST00000527916 BHLHE23Q8NDY6 225 aa8.76□□□□□ -1.01
CPSF1-203ENST00000527916 OR10G2Q8NGC3 310 aa8.76□□□□□ -1.01
CPSF1-203ENST00000527916 OR51L1Q8NGJ5 315 aa8.76□□□□□ -1.01
CPSF1-203ENST00000527916 OR9Q1Q8NGQ5 310 aa8.76□□□□□ -1.01
CPSF1-203ENST00000527916 GIPC3Q8TF64 312 aa8.76□□□□□ -1.01
CPSF1-203ENST00000527916 SPRYD4Q8WW59 207 aaPredicted RBP8.76□□□□□ -1.01
CPSF1-203ENST00000527916 PLEKHA8Q96JA3 519 aa8.76□□□□□ -1.01
CPSF1-203ENST00000527916 FAM71F1Q96KD3 344 aaPredicted RBP8.76□□□□□ -1.01
CPSF1-203ENST00000527916 FEVQ99581 238 aa8.76□□□□□ -1.01
CPSF1-203ENST00000527916 NIPSNAP1Q9BPW8 284 aa8.76□□□□□ -1.01
CPSF1-203ENST00000527916 THTPAQ9BU02 230 aa8.76□□□□□ -1.01
CPSF1-203ENST00000527916 CHIAQ9BZP6 476 aa8.76□□□□□ -1.01
CPSF1-203ENST00000527916 TOR3AQ9H497 397 aa8.76□□□□□ -1.01
CPSF1-203ENST00000527916 ARMC1Q9NVT9 282 aa8.76□□□□□ -1.01
CPSF1-203ENST00000527916 MRPL15Q9P015 296 aaKnown RBP8.76□□□□□ -1.01
CPSF1-203ENST00000527916 RIIAD1A6NNX1 92 aa8.75□□□□□ -1.01
CPSF1-203ENST00000527916 ZNF878C9JN71 531 aa8.75□□□□□ -1.01
CPSF1-203ENST00000527916 XRCC2O43543 280 aa8.75□□□□□ -1.01
CPSF1-203ENST00000527916 CYB5R3P00387 301 aaPredicted RBP8.75□□□□□ -1.01
CPSF1-203ENST00000527916 APOC1P02654 83 aa8.75□□□□□ -1.01
CPSF1-203ENST00000527916 HLA-DPB1P04440 258 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms