RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 CD300LBA8K4G0 201 aa9.17□□□□□ -0.94
NEDD8-205ENST00000527046 LOC110117498-PIK3R3F6TDL0 507 aa9.17□□□□□ -0.94
NEDD8-205ENST00000527046 H0YL77 283 aa9.17□□□□□ -0.94
NEDD8-205ENST00000527046 H7C417 338 aa9.17□□□□□ -0.94
NEDD8-205ENST00000527046 MLNRO43193 412 aa9.17□□□□□ -0.94
NEDD8-205ENST00000527046 XRCC2O43543 280 aa9.17□□□□□ -0.94
NEDD8-205ENST00000527046 LMX1BO60663 402 aa9.17□□□□□ -0.94
NEDD8-205ENST00000527046 APOC1P02654 83 aa9.17□□□□□ -0.94
NEDD8-205ENST00000527046 MT-ND2P03891 347 aa9.17□□□□□ -0.94
NEDD8-205ENST00000527046 NAT2P11245 290 aa9.17□□□□□ -0.94
NEDD8-205ENST00000527046 CCL1P22362 96 aa9.17□□□□□ -0.94
NEDD8-205ENST00000527046 GSK3AP49840 483 aa9.17□□□□□ -0.94
NEDD8-205ENST00000527046 KLF3P57682 345 aaPredicted RBP9.17□□□□□ -0.94
NEDD8-205ENST00000527046 RPS23P62266 143 aaKnown RBP9.17□□□□□ -0.94
NEDD8-205ENST00000527046 OR8B8Q15620 311 aa9.17□□□□□ -0.94
NEDD8-205ENST00000527046 RBM48Q5RL73 367 aaKnown RBP9.17□□□□□ -0.94
NEDD8-205ENST00000527046 DNM1P46Q6ZS02 220 aa9.17□□□□□ -0.94
NEDD8-205ENST00000527046 ZNF786Q8N393 782 aa9.17□□□□□ -0.94
NEDD8-205ENST00000527046 OR52H1Q8NGJ2 320 aa9.17□□□□□ -0.94
NEDD8-205ENST00000527046 OR14K1Q8NGZ2 314 aa9.17□□□□□ -0.94
NEDD8-205ENST00000527046 OR10AC1Q8NH08 325 aa9.17□□□□□ -0.94
NEDD8-205ENST00000527046 OR52N1Q8NH53 320 aa9.17□□□□□ -0.94
NEDD8-205ENST00000527046 OR51E1Q8TCB6 317 aa9.17□□□□□ -0.94
NEDD8-205ENST00000527046 GATAD2BQ8WXI9 593 aa9.17□□□□□ -0.94
NEDD8-205ENST00000527046 REEP6Q96HR9 211 aa9.17□□□□□ -0.94
NEDD8-205ENST00000527046 PGAM5Q96HS1 289 aa9.17□□□□□ -0.94
NEDD8-205ENST00000527046 COG8Q96MW5 612 aa9.17□□□□□ -0.94
NEDD8-205ENST00000527046 SORCS2Q96PQ0 1159 aa9.17□□□□□ -0.94
NEDD8-205ENST00000527046 OR5M11Q96RB7 305 aa9.17□□□□□ -0.94
NEDD8-205ENST00000527046 SLC30A2Q9BRI3 323 aa9.17□□□□□ -0.94
NEDD8-205ENST00000527046 CACNG6Q9BXT2 260 aa9.17□□□□□ -0.94
NEDD8-205ENST00000527046 FGF23Q9GZV9 251 aaPredicted RBP9.17□□□□□ -0.94
NEDD8-205ENST00000527046 MSL2Q9HCI7 577 aa9.17□□□□□ -0.94
NEDD8-205ENST00000527046 BABAM2Q9NXR7 383 aa9.17□□□□□ -0.94
NEDD8-205ENST00000527046 TPRKBQ9Y3C4 175 aa9.17□□□□□ -0.94
NEDD8-205ENST00000527046 SNX5Q9Y5X3 404 aa9.17□□□□□ -0.94
NEDD8-205ENST00000527046 PRRC2AP48634 2157 aaKnown RBP9.16□□□□□ -0.94
NEDD8-205ENST00000527046 IRGMA1A4Y4 181 aa9.16□□□□□ -0.94
NEDD8-205ENST00000527046 P2RY10O00398 339 aa9.16□□□□□ -0.94
NEDD8-205ENST00000527046 TBX1O43435 398 aa9.16□□□□□ -0.94
NEDD8-205ENST00000527046 NCR1O76036 304 aa9.16□□□□□ -0.94
NEDD8-205ENST00000527046 LY6HO94772 140 aa9.16□□□□□ -0.94
NEDD8-205ENST00000527046 IGHV1-46P01743 117 aa9.16□□□□□ -0.94
NEDD8-205ENST00000527046 IGHV4-39P01824 125 aa9.16□□□□□ -0.94
NEDD8-205ENST00000527046 ADH4P08319 380 aa9.16□□□□□ -0.94
NEDD8-205ENST00000527046 GCH1P30793 250 aa9.16□□□□□ -0.94
NEDD8-205ENST00000527046 MAGEB1P43366 347 aa9.16□□□□□ -0.94
NEDD8-205ENST00000527046 TGM4P49221 684 aa9.16□□□□□ -0.94
NEDD8-205ENST00000527046 PPOXP50336 477 aa9.16□□□□□ -0.94
NEDD8-205ENST00000527046 CCR9P51686 369 aa9.16□□□□□ -0.94
NEDD8-205ENST00000527046 CDH15P55291 814 aa9.16□□□□□ -0.94
NEDD8-205ENST00000527046 MED21Q13503 144 aa9.16□□□□□ -0.94
NEDD8-205ENST00000527046 ALKBH1Q13686 389 aaKnown RBP9.16□□□□□ -0.94
NEDD8-205ENST00000527046 DEFB113Q30KQ7 82 aa9.16□□□□□ -0.94
NEDD8-205ENST00000527046 ZNF829Q3KNS6 432 aaPredicted RBP9.16□□□□□ -0.94
NEDD8-205ENST00000527046 DMKNQ6E0U4 476 aaPredicted RBP9.16□□□□□ -0.94
NEDD8-205ENST00000527046 UNQ6126/PRO20091Q6UXV3 157 aa9.16□□□□□ -0.94
NEDD8-205ENST00000527046 PGAP1Q75T13 922 aa9.16□□□□□ -0.94
NEDD8-205ENST00000527046 PRSS48Q7RTY5 328 aa9.16□□□□□ -0.94
NEDD8-205ENST00000527046 TGIF2LYQ8IUE0 185 aa9.16□□□□□ -0.94
NEDD8-205ENST00000527046 OR5AS1Q8N127 324 aa9.16□□□□□ -0.94
NEDD8-205ENST00000527046 STX19Q8N4C7 294 aa9.16□□□□□ -0.94
NEDD8-205ENST00000527046 OR8G5Q8NG78 346 aa9.16□□□□□ -0.94
NEDD8-205ENST00000527046 OR56B2PQ8NGI1 322 aa9.16□□□□□ -0.94
NEDD8-205ENST00000527046 RGP1Q92546 391 aaPredicted RBP9.16□□□□□ -0.94
NEDD8-205ENST00000527046 NINJ1Q92982 152 aa9.16□□□□□ -0.94
NEDD8-205ENST00000527046 PIGTQ969N2 578 aa9.16□□□□□ -0.94
NEDD8-205ENST00000527046 CCL19Q99731 98 aa9.16□□□□□ -0.94
NEDD8-205ENST00000527046 YTHDF1Q9BYJ9 559 aaKnown RBP9.16□□□□□ -0.94
NEDD8-205ENST00000527046 GSX2Q9BZM3 304 aa9.16□□□□□ -0.94
NEDD8-205ENST00000527046 GPR84Q9NQS5 396 aa9.16□□□□□ -0.94
NEDD8-205ENST00000527046 FAIMQ9NVQ4 179 aa9.16□□□□□ -0.94
NEDD8-205ENST00000527046 SCN3BQ9NY72 215 aa9.16□□□□□ -0.94
NEDD8-205ENST00000527046 V9GYS6 101 aa9.16□□□□□ -0.94
NEDD8-205ENST00000527046 NAV2Q8IVL1 2488 aa9.16□□□□□ -0.94
NEDD8-205ENST00000527046 TACC2O95359 2948 aa9.16□□□□□ -0.94
NEDD8-205ENST00000527046 LOC390937A0A1W2PQ73 354 aa9.15□□□□□ -0.94
NEDD8-205ENST00000527046 C17orf100A8MU93 164 aa9.15□□□□□ -0.94
NEDD8-205ENST00000527046 VSTM5A8MXK1 200 aa9.15□□□□□ -0.94
NEDD8-205ENST00000527046 ZFPL1O95159 310 aa9.15□□□□□ -0.94
NEDD8-205ENST00000527046 HLA-DPB1P04440 258 aa9.15□□□□□ -0.94
NEDD8-205ENST00000527046 ISG15P05161 165 aa9.15□□□□□ -0.94
NEDD8-205ENST00000527046 TACSTD2P09758 323 aa9.15□□□□□ -0.94
NEDD8-205ENST00000527046 PCMT1P22061 227 aa9.15□□□□□ -0.94
NEDD8-205ENST00000527046 MAP2K4P45985 399 aa9.15□□□□□ -0.94
NEDD8-205ENST00000527046 PTH2RP49190 550 aa9.15□□□□□ -0.94
NEDD8-205ENST00000527046 RPS11P62280 158 aaKnown RBP eCLIP9.15□□□□□ -0.94
NEDD8-205ENST00000527046 ACTA2P62736 377 aa9.15□□□□□ -0.94
NEDD8-205ENST00000527046 ACTG2P63267 376 aa9.15□□□□□ -0.94
NEDD8-205ENST00000527046 ACSM1Q08AH1 577 aa9.15□□□□□ -0.94
NEDD8-205ENST00000527046 MAB21L1Q13394 359 aa9.15□□□□□ -0.94
NEDD8-205ENST00000527046 TESK1Q15569 626 aa9.15□□□□□ -0.94
NEDD8-205ENST00000527046 ASPHD2Q6ICH7 369 aa9.15□□□□□ -0.94
NEDD8-205ENST00000527046 KLBQ86Z14 1044 aa9.15□□□□□ -0.94
NEDD8-205ENST00000527046 KLHL36Q8N4N3 616 aa9.15□□□□□ -0.94
NEDD8-205ENST00000527046 MYDGFQ969H8 173 aa9.15□□□□□ -0.94
NEDD8-205ENST00000527046 PGLYRP3Q96LB9 341 aa9.15□□□□□ -0.94
NEDD8-205ENST00000527046 PDCD1LG2Q9BQ51 273 aa9.15□□□□□ -0.94
NEDD8-205ENST00000527046 OR10A2Q9H208 303 aa9.15□□□□□ -0.94
NEDD8-205ENST00000527046 CXXC4Q9H2H0 198 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms