RNA–Protein interactions for RNA: ENST00000524646.1

PKP3-202, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 312 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-202ENST00000524646 OR51E1Q8TCB6 317 aa7.9□□□□□ -1.14
PKP3-202ENST00000524646 THAP3Q8WTV1 239 aaPredicted RBP7.9□□□□□ -1.14
PKP3-202ENST00000524646 CASTOR1Q8WTX7 329 aa7.9□□□□□ -1.14
PKP3-202ENST00000524646 DNASE2BQ8WZ79 361 aa7.9□□□□□ -1.14
PKP3-202ENST00000524646 ZNF75AQ96N20 296 aa7.9□□□□□ -1.14
PKP3-202ENST00000524646 NICN1Q9BSH3 213 aa7.9□□□□□ -1.14
PKP3-202ENST00000524646 PHF7Q9BWX1 381 aaPredicted RBP7.9□□□□□ -1.14
PKP3-202ENST00000524646 TMEM59Q9BXS4 323 aa7.9□□□□□ -1.14
PKP3-202ENST00000524646 SELENOIQ9C0D9 397 aa7.9□□□□□ -1.14
PKP3-202ENST00000524646 GAREM1Q9H706 876 aa7.9□□□□□ -1.14
PKP3-202ENST00000524646 PTGES2Q9H7Z7 377 aa7.9□□□□□ -1.14
PKP3-202ENST00000524646 FN3KRPQ9HA64 309 aa7.9□□□□□ -1.14
PKP3-202ENST00000524646 PNRC2Q9NPJ4 139 aaKnown RBP7.9□□□□□ -1.14
PKP3-202ENST00000524646 C12orf4Q9NQ89 552 aa7.9□□□□□ -1.14
PKP3-202ENST00000524646 SHPKQ9UHJ6 478 aa7.9□□□□□ -1.14
PKP3-202ENST00000524646 MKI67P46013 3256 aaKnown RBP7.9□□□□□ -1.14
PKP3-202ENST00000524646 CEP290O15078 2479 aa7.9□□□□□ -1.15
PKP3-202ENST00000524646 PI4KAP42356 2102 aa7.9□□□□□ -1.15
PKP3-202ENST00000524646 LOC100509620A0A075B734 347 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 TRBV6-7A0A0A0MS04 114 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 FAM25EA8MYX2 175 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 F8VVB4 439 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 F8VWA3 439 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 CDK2AP1O14519 115 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 BCAT2O15382 392 aaPredicted RBP7.89□□□□□ -1.15
PKP3-202ENST00000524646 EFSO43281 561 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 EFNA2O43921 213 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 ZFAND5O76080 213 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 ONECUT2O95948 504 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 PMP2P02689 132 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 GP1BAP07359 652 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 HCKP08631 526 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 MYF5P13349 255 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 CTRB1P17538 263 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 CNR1P21554 472 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 THBS4P35443 961 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 SERPINF1P36955 418 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 OR3A4PP47883 348 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 MICBQ29980 383 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 ZNF385CQ66K41 422 aaPredicted RBP7.89□□□□□ -1.15
PKP3-202ENST00000524646 CTRB2Q6GPI1 263 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 FAM122CQ6P4D5 195 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 TMEM71Q6P5X7 295 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 CPEB2Q7Z5Q1 589 aaKnown RBP7.89□□□□□ -1.15
PKP3-202ENST00000524646 RTN4RL2Q86UN3 420 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 ANGPTL5Q86XS5 388 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 SLC25A45Q8N413 288 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 FADS6Q8N9I5 356 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 INO80EQ8NBZ0 244 aaPredicted RBP7.89□□□□□ -1.15
PKP3-202ENST00000524646 OR10G3Q8NGC4 313 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 OR4K17Q8NGC6 315 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 OR56B1Q8NGI3 324 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 OR5H2Q8NGV7 314 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 MARCH1Q8TCQ1 289 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 SSC4DQ8WTU2 575 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 RAB3CQ96E17 227 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 SPACA9Q96E40 222 aaPredicted RBP7.89□□□□□ -1.15
PKP3-202ENST00000524646 OXGR1Q96P68 337 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 MESP1Q9BRJ9 268 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 URM1Q9BTM9 101 aaKnown RBP7.89□□□□□ -1.15
PKP3-202ENST00000524646 NMES1Q9C002 83 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 PIGMQ9H3S5 423 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 ZNF576Q9H609 170 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 CHMP1AQ9HD42 196 aaPredicted RBP7.89□□□□□ -1.15
PKP3-202ENST00000524646 GPR84Q9NQS5 396 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.89□□□□□ -1.15
PKP3-202ENST00000524646 ASF1BQ9NVP2 202 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 C19orf25Q9UFG5 118 aaPredicted RBP7.89□□□□□ -1.15
PKP3-202ENST00000524646 ATXN7L1Q9ULK2 861 aaPredicted RBP7.89□□□□□ -1.15
PKP3-202ENST00000524646 KCNK7Q9Y2U2 307 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 HDGFL3Q9Y3E1 203 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 FLVCR1Q9Y5Y0 555 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 CACNA1EQ15878 2313 aa7.89□□□□□ -1.15
PKP3-202ENST00000524646 ASCC3Q8N3C0 2202 aaKnown RBP7.88□□□□□ -1.15
PKP3-202ENST00000524646 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.88□□□□□ -1.15
PKP3-202ENST00000524646 TEX13DA0A0J9YY54 714 aaPredicted RBP7.88□□□□□ -1.15
PKP3-202ENST00000524646 LOC102725191A0A1B0GVB3 256 aa7.88□□□□□ -1.15
PKP3-202ENST00000524646 RAB19A4D1S5 217 aa7.88□□□□□ -1.15
PKP3-202ENST00000524646 AQP7P3A6NL99 342 aa7.88□□□□□ -1.15
PKP3-202ENST00000524646 MPTX1A8MV57 137 aa7.88□□□□□ -1.15
PKP3-202ENST00000524646 EEF1E1-BLOC1S5C9J1V9 151 aa7.88□□□□□ -1.15
PKP3-202ENST00000524646 F5H0A9 414 aaPredicted RBP7.88□□□□□ -1.15
PKP3-202ENST00000524646 SCRG1O75711 98 aa7.88□□□□□ -1.15
PKP3-202ENST00000524646 DKK1O94907 266 aa7.88□□□□□ -1.15
PKP3-202ENST00000524646 TIAF1O95411 115 aa7.88□□□□□ -1.15
PKP3-202ENST00000524646 SFT2D2O95562 160 aa7.88□□□□□ -1.15
PKP3-202ENST00000524646 IGLV3-1P01715 115 aa7.88□□□□□ -1.15
PKP3-202ENST00000524646 TPT1P13693 172 aaKnown RBP7.88□□□□□ -1.15
PKP3-202ENST00000524646 PRF1P14222 555 aa7.88□□□□□ -1.15
PKP3-202ENST00000524646 ABOP16442 354 aa7.88□□□□□ -1.15
PKP3-202ENST00000524646 AKR1C4P17516 323 aa7.88□□□□□ -1.15
PKP3-202ENST00000524646 AMY2BP19961 511 aa7.88□□□□□ -1.15
PKP3-202ENST00000524646 EIF1P41567 113 aaKnown RBP7.88□□□□□ -1.15
PKP3-202ENST00000524646 TAS2R46P59540 309 aa7.88□□□□□ -1.15
PKP3-202ENST00000524646 GABREP78334 506 aa7.88□□□□□ -1.15
PKP3-202ENST00000524646 DCDP81605 110 aaKnown RBP7.88□□□□□ -1.15
PKP3-202ENST00000524646 CYCSP99999 105 aaKnown RBP7.88□□□□□ -1.15
PKP3-202ENST00000524646 MC2RQ01718 297 aa7.88□□□□□ -1.15
PKP3-202ENST00000524646 NAAAQ02083 359 aa7.88□□□□□ -1.15
PKP3-202ENST00000524646 SHBQ15464 509 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms