RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 ZNF732B4DXR9 585 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 GNB3P16520 340 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 GPNMBQ14956 572 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 TMEM81Q6P7N7 255 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 D2HGDHQ8N465 521 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 EMG1Q92979 244 aaKnown RBP14.6□□□□□ -0.07
USP42-207ENST00000521713 PLA2G3Q9NZ20 509 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 SHROOM3Q8TF72 1996 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 TRIOBPQ9H2D6 2365 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 LOC107986453A0A1B0GWG9 222 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 GALP22466 123 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 OMGP23515 440 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 YBX1P67809 324 aaKnown RBP14.6□□□□□ -0.07
USP42-207ENST00000521713 MYBPHQ13203 477 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 LTC4SQ16873 150 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 AADACL3Q5VUY0 350 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 OR51A4Q8NGJ6 313 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 OIT3Q8WWZ8 545 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 KISS1RQ969F8 398 aaPredicted RBP14.6□□□□□ -0.07
USP42-207ENST00000521713 TMPRSS5Q9H3S3 457 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 PLXNB2O15031 1838 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 A0A087WUJ7 227 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 CD82P27701 267 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 S100A7P31151 101 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 RAE1P78406 368 aaKnown RBP14.6□□□□□ -0.07
USP42-207ENST00000521713 ZNF718Q3SXZ3 478 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 PMS2CLQ68D20 193 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 SYT9Q86SS6 491 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 MFSD4AQ8N468 514 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 SEH1LQ96EE3 360 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 KCNJ15Q99712 375 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 VPS25Q9BRG1 176 aa14.6□□□□□ -0.07
USP42-207ENST00000521713 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.59□□□□□ -0.07
USP42-207ENST00000521713 C21orf140B9A014 251 aa14.59□□□□□ -0.07
USP42-207ENST00000521713 F6UZH7 168 aa14.59□□□□□ -0.07
USP42-207ENST00000521713 TNFSF12O43508 249 aa14.59□□□□□ -0.07
USP42-207ENST00000521713 SPNP16150 400 aa14.59□□□□□ -0.07
USP42-207ENST00000521713 ZNF92Q03936 586 aa14.59□□□□□ -0.07
USP42-207ENST00000521713 CLINT1Q14677 625 aa14.59□□□□□ -0.07
USP42-207ENST00000521713 ZIC1Q15915 447 aa14.59□□□□□ -0.07
USP42-207ENST00000521713 PHYHD1Q5SRE7 291 aa14.59□□□□□ -0.07
USP42-207ENST00000521713 Q6ZRG5 221 aa14.59□□□□□ -0.07
USP42-207ENST00000521713 GALNT16Q8N428 558 aa14.59□□□□□ -0.07
USP42-207ENST00000521713 TMEM99Q8N816 258 aa14.59□□□□□ -0.07
USP42-207ENST00000521713 ARHGDIGQ99819 225 aa14.59□□□□□ -0.07
USP42-207ENST00000521713 FAM60AQ9NP50 221 aa14.59□□□□□ -0.07
USP42-207ENST00000521713 SOD1P00441 154 aa14.59□□□□□ -0.07
USP42-207ENST00000521713 GUSBP08236 651 aa14.59□□□□□ -0.07
USP42-207ENST00000521713 DUSP1P28562 367 aa14.59□□□□□ -0.07
USP42-207ENST00000521713 ABHD6Q9BV23 337 aa14.59□□□□□ -0.07
USP42-207ENST00000521713 NRXN2Q9P2S2 1712 aa14.59□□□□□ -0.07
USP42-207ENST00000521713 AVPR2P30518 371 aa14.59□□□□□ -0.07
USP42-207ENST00000521713 PTGER4P35408 488 aa14.59□□□□□ -0.07
USP42-207ENST00000521713 WIPI1Q5MNZ9 446 aaPredicted RBP14.59□□□□□ -0.07
USP42-207ENST00000521713 FAM162BQ5T6X4 162 aa14.59□□□□□ -0.07
USP42-207ENST00000521713 SFT2D1Q8WV19 159 aa14.59□□□□□ -0.07
USP42-207ENST00000521713 UBL7Q96S82 380 aaPredicted RBP14.59□□□□□ -0.07
USP42-207ENST00000521713 PDCD1LG2Q9BQ51 273 aa14.59□□□□□ -0.07
USP42-207ENST00000521713 ARV1Q9H2C2 271 aa14.59□□□□□ -0.07
USP42-207ENST00000521713 ZNF724A8MTY0 619 aa14.59□□□□□ -0.07
USP42-207ENST00000521713 DEGS1O15121 323 aa14.59□□□□□ -0.07
USP42-207ENST00000521713 APOA2P02652 100 aa14.59□□□□□ -0.07
USP42-207ENST00000521713 FABP1P07148 127 aa14.59□□□□□ -0.07
USP42-207ENST00000521713 HYAL4Q2M3T9 481 aa14.59□□□□□ -0.07
USP42-207ENST00000521713 PRICKLE4Q2TBC4 344 aa14.59□□□□□ -0.07
USP42-207ENST00000521713 OGFOD3Q6PK18 319 aa14.59□□□□□ -0.07
USP42-207ENST00000521713 CORO6Q6QEF8 472 aa14.59□□□□□ -0.07
USP42-207ENST00000521713 CD37P11049 281 aa14.58□□□□□ -0.07
USP42-207ENST00000521713 RAB11AP62491 216 aa14.58□□□□□ -0.07
USP42-207ENST00000521713 FABP5Q01469 135 aa14.58□□□□□ -0.07
USP42-207ENST00000521713 PMPCAQ10713 525 aa14.58□□□□□ -0.07
USP42-207ENST00000521713 XAF1Q6GPH4 301 aa14.58□□□□□ -0.07
USP42-207ENST00000521713 DBX2Q6ZNG2 339 aa14.58□□□□□ -0.07
USP42-207ENST00000521713 PRSS41Q7RTY9 318 aa14.58□□□□□ -0.07
USP42-207ENST00000521713 HPSE2Q8WWQ2 592 aa14.58□□□□□ -0.07
USP42-207ENST00000521713 JAM3Q9BX67 310 aa14.58□□□□□ -0.07
USP42-207ENST00000521713 ACOXLQ9NUZ1 547 aa14.58□□□□□ -0.07
USP42-207ENST00000521713 NEU3Q9UQ49 428 aa14.58□□□□□ -0.07
USP42-207ENST00000521713 A0A096LPE4 126 aa14.58□□□□□ -0.08
USP42-207ENST00000521713 KIR2DS1A0A191URI9 304 aa14.58□□□□□ -0.08
USP42-207ENST00000521713 A0A1W2PPZ6 126 aa14.58□□□□□ -0.08
USP42-207ENST00000521713 C5orf49A4QMS7 147 aa14.58□□□□□ -0.08
USP42-207ENST00000521713 ALG1L2C9J202 215 aa14.58□□□□□ -0.08
USP42-207ENST00000521713 HSPB6O14558 160 aa14.58□□□□□ -0.08
USP42-207ENST00000521713 FGF7P21781 194 aa14.58□□□□□ -0.08
USP42-207ENST00000521713 KIR2DS4P43632 304 aa14.58□□□□□ -0.08
USP42-207ENST00000521713 KIR2DS1Q14954 304 aa14.58□□□□□ -0.08
USP42-207ENST00000521713 RNPS1Q15287 305 aaKnown RBP14.58□□□□□ -0.08
USP42-207ENST00000521713 C1QTNF12Q5T7M4 302 aa14.58□□□□□ -0.08
USP42-207ENST00000521713 RNLSQ5VYX0 342 aa14.58□□□□□ -0.08
USP42-207ENST00000521713 CALHM3Q86XJ0 350 aa14.58□□□□□ -0.08
USP42-207ENST00000521713 ZNF485Q8NCK3 441 aa14.58□□□□□ -0.08
USP42-207ENST00000521713 OR10G3Q8NGC4 313 aa14.58□□□□□ -0.08
USP42-207ENST00000521713 ROBO4Q8WZ75 1007 aa14.58□□□□□ -0.08
USP42-207ENST00000521713 TRAV1-2A0A0B4J238 106 aa14.58□□□□□ -0.08
USP42-207ENST00000521713 TMEM235A6NFC5 223 aa14.58□□□□□ -0.08
USP42-207ENST00000521713 GSTP1P09211 210 aaKnown RBP14.58□□□□□ -0.08
USP42-207ENST00000521713 AGERQ15109 404 aa14.58□□□□□ -0.08
USP42-207ENST00000521713 PLPP7Q8NBV4 271 aa14.58□□□□□ -0.08
USP42-207ENST00000521713 URGCP-MRPS24S4R325 110 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms