RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 GCSAMLQ5JQS6 135 aa2.23□□□□□ -2.05
HMGN1P28-201ENST00000521340 FAM173BQ6P4H8 233 aa2.23□□□□□ -2.05
HMGN1P28-201ENST00000521340 C16orf87Q6PH81 154 aa2.23□□□□□ -2.05
HMGN1P28-201ENST00000521340 LINC00523Q86TU6 105 aa2.23□□□□□ -2.05
HMGN1P28-201ENST00000521340 TMEM183AQ8IXX5 376 aa2.23□□□□□ -2.05
HMGN1P28-201ENST00000521340 PDCL2Q8N4E4 241 aa2.23□□□□□ -2.05
HMGN1P28-201ENST00000521340 ZNF433Q8N7K0 673 aaPredicted RBP2.23□□□□□ -2.05
HMGN1P28-201ENST00000521340 Q8N976 141 aa2.23□□□□□ -2.05
HMGN1P28-201ENST00000521340 PROKR2Q8NFJ6 384 aa2.23□□□□□ -2.05
HMGN1P28-201ENST00000521340 OR51F2Q8NH61 342 aa2.23□□□□□ -2.05
HMGN1P28-201ENST00000521340 OR6X1Q8NH79 312 aa2.23□□□□□ -2.05
HMGN1P28-201ENST00000521340 RAB1CQ92928 201 aa2.23□□□□□ -2.05
HMGN1P28-201ENST00000521340 MRGPRFQ96AM1 343 aa2.23□□□□□ -2.05
HMGN1P28-201ENST00000521340 RPEQ96AT9 228 aa2.23□□□□□ -2.05
HMGN1P28-201ENST00000521340 ELSPBP1Q96BH3 223 aa2.23□□□□□ -2.05
HMGN1P28-201ENST00000521340 FAM3DQ96BQ1 224 aa2.23□□□□□ -2.05
HMGN1P28-201ENST00000521340 ECHDC3Q96DC8 303 aa2.23□□□□□ -2.05
HMGN1P28-201ENST00000521340 C9orf72Q96LT7 481 aa2.23□□□□□ -2.05
HMGN1P28-201ENST00000521340 RNF145Q96MT1 663 aa2.23□□□□□ -2.05
HMGN1P28-201ENST00000521340 CSPG4P5Q96PW8 444 aa2.23□□□□□ -2.05
HMGN1P28-201ENST00000521340 LLPHQ9BRT6 129 aaKnown RBP2.23□□□□□ -2.05
HMGN1P28-201ENST00000521340 AGMATQ9BSE5 352 aa2.23□□□□□ -2.05
HMGN1P28-201ENST00000521340 IL22Q9GZX6 179 aa2.23□□□□□ -2.05
HMGN1P28-201ENST00000521340 CHRNA10Q9GZZ6 450 aa2.23□□□□□ -2.05
HMGN1P28-201ENST00000521340 CDC42EP4Q9H3Q1 356 aaKnown RBP2.23□□□□□ -2.05
HMGN1P28-201ENST00000521340 PDFQ9HBH1 243 aa2.23□□□□□ -2.05
HMGN1P28-201ENST00000521340 KCNJ16Q9NPI9 418 aa2.23□□□□□ -2.05
HMGN1P28-201ENST00000521340 YARS2Q9Y2Z4 477 aaKnown RBP2.23□□□□□ -2.05
HMGN1P28-201ENST00000521340 CACNG2Q9Y698 323 aa2.23□□□□□ -2.05
HMGN1P28-201ENST00000521340 DISP2A7MBM2 1401 aa2.23□□□□□ -2.05
HMGN1P28-201ENST00000521340 FER1L6Q2WGJ9 1857 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 THSD7AQ9UPZ6 1657 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 SIP14410 1827 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 A0A0J9YYE9 177 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 A0A1B0GVX0 72 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 A0A1W2PPV4 95 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 NKX2-6A6NCS4 301 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 SLC22A20A6NK97 555 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 FAM166BA8MTA8 275 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 SERPINE3A8MV23 424 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 NME4O00746 187 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 XKRYO14609 159 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 KMOO15229 486 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 RAD51CO43502 376 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 KDELR3O43731 214 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 NEMFO60524 1076 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 GMDSO60547 372 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 RP2O75695 350 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 CTDNEP1O95476 244 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 TRBC1P01850 177 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 HOXC4P09017 264 aaPredicted RBP2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 NR2C1P13056 603 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 CSNK2A2P19784 350 aaPredicted RBP2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 USF1P22415 310 aaPredicted RBP2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 BMI1P35226 326 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 RFC3P40938 356 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 CDKN2BP42772 138 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 CSNK1DP48730 415 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 WNT4P56705 351 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 CARD18P57730 90 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 ZNF121P58317 390 aaPredicted RBP2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 XIAPP98170 497 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 RCAN2Q14206 197 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 GABRA6Q16445 453 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 COA6Q5JTJ3 125 aaKnown RBP2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 CCNJQ5T5M9 372 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 GPR107Q5VW38 600 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 TMEM205Q6UW68 189 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 H2AFVQ71UI9 128 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 C6orf120Q7Z4R8 191 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 CAMK2N1Q7Z7J9 78 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 ZNF429Q86V71 674 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 MREGQ8N565 214 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 OR52E2Q8NGJ4 325 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 BLOC1S5Q8TDH9 187 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 SRSF12Q8WXF0 261 aaKnown RBP2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 EEF1AKMT3Q96AZ1 226 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 GALNT14Q96FL9 552 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 CERS2Q96G23 380 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 DNAJC1Q96KC8 554 aaKnown RBP2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 ZNF681Q96N22 645 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 ZNF317Q96PQ6 595 aaPredicted RBP2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 CHID1Q9BWS9 393 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 SAMD10Q9BYL1 202 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 DEFB129Q9H1M3 183 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 ZNF442Q9H7R0 627 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 ANAPC11Q9NYG5 84 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 ZNF629Q9UEG4 869 aaPredicted RBP2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 COMMD3-BMI1R4GMX3 469 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 LOC285556D6RIA3 1793 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 DOCK5Q9H7D0 1870 aa2.22□□□□□ -2.05
HMGN1P28-201ENST00000521340 GAKO14976 1311 aa2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 COL1A1P02452 1464 aaPredicted RBP2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 IGKV1-8A0A0C4DH67 115 aa2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 A0A1B0GUA9 196 aa2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 TMEM120BA0PK00 339 aa2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 LAD1O00515 517 aa2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 MGAMO43451 1857 aa2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 CIAO1O76071 339 aa2.21□□□□□ -2.06
HMGN1P28-201ENST00000521340 YEATS4O95619 227 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms