RNA–Protein interactions for RNA: ENST00000520946.1

MRPS28-206, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 5

Gene MRPS28, Length 411 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-206ENST00000520946 PGBD2Q6P3X8 592 aa9.47□□□□□ -0.89
MRPS28-206ENST00000520946 Q6ZPA2 131 aa9.47□□□□□ -0.89
MRPS28-206ENST00000520946 COLCA1Q6ZS62 124 aa9.47□□□□□ -0.89
MRPS28-206ENST00000520946 ZNF826PQ6ZT77 177 aa9.47□□□□□ -0.89
MRPS28-206ENST00000520946 TSEN54Q7Z6J9 526 aaKnown RBP9.47□□□□□ -0.89
MRPS28-206ENST00000520946 CPLX4Q7Z7G2 160 aa9.47□□□□□ -0.89
MRPS28-206ENST00000520946 NAA40Q86UY6 237 aa9.47□□□□□ -0.89
MRPS28-206ENST00000520946 FAM90A1Q86YD7 464 aa9.47□□□□□ -0.89
MRPS28-206ENST00000520946 OR4S1Q8NGB4 309 aa9.47□□□□□ -0.89
MRPS28-206ENST00000520946 OR4C15Q8NGM1 316 aa9.47□□□□□ -0.89
MRPS28-206ENST00000520946 ZNF799Q96GE5 643 aa9.47□□□□□ -0.89
MRPS28-206ENST00000520946 RSRC1Q96IZ7 334 aaKnown RBP9.47□□□□□ -0.89
MRPS28-206ENST00000520946 CCL13Q99616 98 aa9.47□□□□□ -0.89
MRPS28-206ENST00000520946 SIKE1Q9BRV8 207 aa9.47□□□□□ -0.89
MRPS28-206ENST00000520946 SEMA6AQ9H2E6 1030 aa9.47□□□□□ -0.89
MRPS28-206ENST00000520946 MRPL15Q9P015 296 aaKnown RBP9.47□□□□□ -0.89
MRPS28-206ENST00000520946 ZNRD1Q9P1U0 126 aa9.47□□□□□ -0.89
MRPS28-206ENST00000520946 FBLN5Q9UBX5 448 aa9.47□□□□□ -0.89
MRPS28-206ENST00000520946 B9D1Q9UPM9 204 aa9.47□□□□□ -0.89
MRPS28-206ENST00000520946 AP3M1Q9Y2T2 418 aa9.47□□□□□ -0.89
MRPS28-206ENST00000520946 SNX13Q9Y5W8 968 aa9.47□□□□□ -0.89
MRPS28-206ENST00000520946 LOC100653049A0A140TA62 436 aa9.46□□□□□ -0.9
MRPS28-206ENST00000520946 A0A1B0GWJ7 208 aa9.46□□□□□ -0.9
MRPS28-206ENST00000520946 RNASEK-C17orf49H0YIS7 233 aa9.46□□□□□ -0.9
MRPS28-206ENST00000520946 IMPA2O14732 288 aa9.46□□□□□ -0.9
MRPS28-206ENST00000520946 PEX14O75381 377 aa9.46□□□□□ -0.9
MRPS28-206ENST00000520946 KRT34O76011 436 aa9.46□□□□□ -0.9
MRPS28-206ENST00000520946 PPP1R3DO95685 299 aa9.46□□□□□ -0.9
MRPS28-206ENST00000520946 H1F0P07305 194 aaKnown RBP9.46□□□□□ -0.9
MRPS28-206ENST00000520946 VSIG10L2P0DP72 767 aa9.46□□□□□ -0.9
MRPS28-206ENST00000520946 MUC1P15941 1255 aaPredicted RBP9.46□□□□□ -0.9
MRPS28-206ENST00000520946 NAA10P41227 235 aaPredicted RBP9.46□□□□□ -0.9
MRPS28-206ENST00000520946 HIST1H3AP68431 136 aa9.46□□□□□ -0.9
MRPS28-206ENST00000520946 COQ5Q5HYK3 327 aa9.46□□□□□ -0.9
MRPS28-206ENST00000520946 HIST2H3PS2Q5TEC6 136 aa9.46□□□□□ -0.9
MRPS28-206ENST00000520946 SAMD5Q5TGI4 173 aa9.46□□□□□ -0.9
MRPS28-206ENST00000520946 SMARCD3Q6STE5 483 aa9.46□□□□□ -0.9
MRPS28-206ENST00000520946 CFAP77Q6ZQR2 320 aa9.46□□□□□ -0.9
MRPS28-206ENST00000520946 C1orf122Q6ZSJ8 110 aa9.46□□□□□ -0.9
MRPS28-206ENST00000520946 PTCHD4Q6ZW05 846 aa9.46□□□□□ -0.9
MRPS28-206ENST00000520946 HIST2H3AQ71DI3 136 aa9.46□□□□□ -0.9
MRPS28-206ENST00000520946 OR51G2Q8NGK0 314 aa9.46□□□□□ -0.9
MRPS28-206ENST00000520946 LRRC29Q8WV35 223 aa9.46□□□□□ -0.9
MRPS28-206ENST00000520946 STON2Q8WXE9 905 aa9.46□□□□□ -0.9
MRPS28-206ENST00000520946 ANKRD19PQ9H560 264 aa9.46□□□□□ -0.9
MRPS28-206ENST00000520946 RAB18Q9NP72 206 aa9.46□□□□□ -0.9
MRPS28-206ENST00000520946 RPRD1BQ9NQG5 326 aaKnown RBP9.46□□□□□ -0.9
MRPS28-206ENST00000520946 KAAG1Q9UBP8 84 aa9.46□□□□□ -0.9
MRPS28-206ENST00000520946 SIGLEC7Q9Y286 467 aa9.46□□□□□ -0.9
MRPS28-206ENST00000520946 A0A1W2PQ09 198 aa9.45□□□□□ -0.9
MRPS28-206ENST00000520946 NKX6-3A6NJ46 265 aa9.45□□□□□ -0.9
MRPS28-206ENST00000520946 H3BUX3 64 aa9.45□□□□□ -0.9
MRPS28-206ENST00000520946 FFAR1O14842 300 aa9.45□□□□□ -0.9
MRPS28-206ENST00000520946 PTP4A3O75365 173 aa9.45□□□□□ -0.9
MRPS28-206ENST00000520946 ZNF26P17031 533 aaPredicted RBP9.45□□□□□ -0.9
MRPS28-206ENST00000520946 SLC6A6P31641 620 aa9.45□□□□□ -0.9
MRPS28-206ENST00000520946 ZNF92Q03936 586 aa9.45□□□□□ -0.9
MRPS28-206ENST00000520946 PRB3Q04118 309 aaPredicted RBP9.45□□□□□ -0.9
MRPS28-206ENST00000520946 EMX1Q04741 257 aaPredicted RBP9.45□□□□□ -0.9
MRPS28-206ENST00000520946 LY6EQ16553 131 aa9.45□□□□□ -0.9
MRPS28-206ENST00000520946 RFX4Q33E94 735 aa9.45□□□□□ -0.9
MRPS28-206ENST00000520946 NSUN5P1Q3KNT7 163 aa9.45□□□□□ -0.9
MRPS28-206ENST00000520946 NCR3LG1Q68D85 454 aa9.45□□□□□ -0.9
MRPS28-206ENST00000520946 SLC18B1Q6NT16 456 aa9.45□□□□□ -0.9
MRPS28-206ENST00000520946 METAP1DQ6UB28 335 aaPredicted RBP9.45□□□□□ -0.9
MRPS28-206ENST00000520946 DPY19L4Q7Z388 723 aa9.45□□□□□ -0.9
MRPS28-206ENST00000520946 OR6V1Q8N148 313 aa9.45□□□□□ -0.9
MRPS28-206ENST00000520946 GCSAMQ8N6F7 178 aa9.45□□□□□ -0.9
MRPS28-206ENST00000520946 KLHDC1Q8N7A1 406 aa9.45□□□□□ -0.9
MRPS28-206ENST00000520946 OR9Q1Q8NGQ5 310 aa9.45□□□□□ -0.9
MRPS28-206ENST00000520946 OR4K13Q8NH42 304 aa9.45□□□□□ -0.9
MRPS28-206ENST00000520946 OR2AE1Q8NHA4 323 aa9.45□□□□□ -0.9
MRPS28-206ENST00000520946 FAM162AQ96A26 154 aa9.45□□□□□ -0.9
MRPS28-206ENST00000520946 ATP6V1G3Q96LB4 118 aa9.45□□□□□ -0.9
MRPS28-206ENST00000520946 GPX7Q96SL4 187 aaPredicted RBP9.45□□□□□ -0.9
MRPS28-206ENST00000520946 NMNAT3Q96T66 252 aa9.45□□□□□ -0.9
MRPS28-206ENST00000520946 COPS4Q9BT78 406 aa9.45□□□□□ -0.9
MRPS28-206ENST00000520946 IFT27Q9BW83 186 aa9.45□□□□□ -0.9
MRPS28-206ENST00000520946 NECAP2Q9NVZ3 263 aa9.45□□□□□ -0.9
MRPS28-206ENST00000520946 FOXJ3Q9UPW0 622 aa9.45□□□□□ -0.9
MRPS28-206ENST00000520946 SIGLEC9Q9Y336 463 aa9.45□□□□□ -0.9
MRPS28-206ENST00000520946 CXCR6O00574 342 aa9.44□□□□□ -0.9
MRPS28-206ENST00000520946 TBX1O43435 398 aa9.44□□□□□ -0.9
MRPS28-206ENST00000520946 SERPINA1P01009 418 aa9.44□□□□□ -0.9
MRPS28-206ENST00000520946 SAA4P35542 130 aa9.44□□□□□ -0.9
MRPS28-206ENST00000520946 GNALP38405 381 aa9.44□□□□□ -0.9
MRPS28-206ENST00000520946 GSK3BP49841 420 aa9.44□□□□□ -0.9
MRPS28-206ENST00000520946 GMFBP60983 142 aa9.44□□□□□ -0.9
MRPS28-206ENST00000520946 DBPQ10586 325 aaPredicted RBP9.44□□□□□ -0.9
MRPS28-206ENST00000520946 KLRD1Q13241 179 aa9.44□□□□□ -0.9
MRPS28-206ENST00000520946 RSPO1Q2MKA7 263 aaPredicted RBP9.44□□□□□ -0.9
MRPS28-206ENST00000520946 ARSJQ5FYB0 599 aaPredicted RBP9.44□□□□□ -0.9
MRPS28-206ENST00000520946 VAX1Q5SQQ9 334 aa9.44□□□□□ -0.9
MRPS28-206ENST00000520946 GLYATL3Q5SZD4 288 aa9.44□□□□□ -0.9
MRPS28-206ENST00000520946 KPRPQ5T749 579 aaPredicted RBP9.44□□□□□ -0.9
MRPS28-206ENST00000520946 TEX36Q5VZQ5 186 aa9.44□□□□□ -0.9
MRPS28-206ENST00000520946 DRAM2Q6UX65 266 aa9.44□□□□□ -0.9
MRPS28-206ENST00000520946 ARPINQ7Z6K5 226 aa9.44□□□□□ -0.9
MRPS28-206ENST00000520946 SLC26A10Q8NG04 563 aa9.44□□□□□ -0.9
MRPS28-206ENST00000520946 OR56B2PQ8NGI1 322 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms