RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 NRN1LQ496H8 165 aa8.78□□□□□ -1
SPARC-202ENST00000520687 RNASE12Q5GAN4 147 aaKnown RBP8.78□□□□□ -1
SPARC-202ENST00000520687 ZNF767PQ75MW2 155 aa8.78□□□□□ -1
SPARC-202ENST00000520687 SPICQ8N5J4 248 aa8.78□□□□□ -1
SPARC-202ENST00000520687 ZIC4Q8N9L1 334 aa8.78□□□□□ -1
SPARC-202ENST00000520687 PSMF1Q92530 271 aa8.78□□□□□ -1
SPARC-202ENST00000520687 FAM46BQ96A09 425 aa8.78□□□□□ -1
SPARC-202ENST00000520687 CPNE4Q96A23 557 aaPredicted RBP8.78□□□□□ -1
SPARC-202ENST00000520687 FER1L6-AS2Q96M78 137 aa8.78□□□□□ -1
SPARC-202ENST00000520687 SFXN2Q96NB2 322 aa8.78□□□□□ -1
SPARC-202ENST00000520687 ULBP2Q9BZM5 246 aa8.78□□□□□ -1
SPARC-202ENST00000520687 ALX4Q9H161 411 aaPredicted RBP8.78□□□□□ -1
SPARC-202ENST00000520687 KLK11Q9UBX7 282 aa8.78□□□□□ -1
SPARC-202ENST00000520687 MRPS18BQ9Y676 258 aaKnown RBP8.78□□□□□ -1
SPARC-202ENST00000520687 KIF26BQ2KJY2 2108 aa8.78□□□□□ -1
SPARC-202ENST00000520687 UBR5O95071 2799 aaPredicted RBP8.78□□□□□ -1
SPARC-202ENST00000520687 MEIKINA0A087WXM9 373 aa8.78□□□□□ -1
SPARC-202ENST00000520687 LRRC3CA6NJW4 275 aa8.78□□□□□ -1
SPARC-202ENST00000520687 RAD1O60671 282 aa8.78□□□□□ -1
SPARC-202ENST00000520687 RAMP1O60894 148 aa8.78□□□□□ -1
SPARC-202ENST00000520687 IGLV3-1P01715 115 aa8.78□□□□□ -1
SPARC-202ENST00000520687 C4BPBP20851 252 aa8.78□□□□□ -1
SPARC-202ENST00000520687 OTX1P32242 354 aaPredicted RBP8.78□□□□□ -1
SPARC-202ENST00000520687 THBS4P35443 961 aa8.78□□□□□ -1
SPARC-202ENST00000520687 DLSTP36957 453 aa8.78□□□□□ -1
SPARC-202ENST00000520687 EIF1AXP47813 144 aaKnown RBP8.78□□□□□ -1
SPARC-202ENST00000520687 OC90Q02509 493 aaPredicted RBP8.78□□□□□ -1
SPARC-202ENST00000520687 SPOCK1Q08629 439 aa8.78□□□□□ -1
SPARC-202ENST00000520687 MFAP5Q13361 173 aa8.78□□□□□ -1
SPARC-202ENST00000520687 MEF2DQ14814 521 aa8.78□□□□□ -1
SPARC-202ENST00000520687 ARL6IP1Q15041 203 aa8.78□□□□□ -1
SPARC-202ENST00000520687 FCN2Q15485 313 aa8.78□□□□□ -1
SPARC-202ENST00000520687 PCGF3Q3KNV8 242 aa8.78□□□□□ -1
SPARC-202ENST00000520687 ZNF468Q5VIY5 522 aaPredicted RBP8.78□□□□□ -1
SPARC-202ENST00000520687 ABLIM2Q6H8Q1 611 aa8.78□□□□□ -1
SPARC-202ENST00000520687 GLRX5Q86SX6 157 aa8.78□□□□□ -1
SPARC-202ENST00000520687 GPR137CQ8N3F9 429 aa8.78□□□□□ -1
SPARC-202ENST00000520687 ZNF283Q8N7M2 679 aa8.78□□□□□ -1
SPARC-202ENST00000520687 OR52H1Q8NGJ2 320 aa8.78□□□□□ -1
SPARC-202ENST00000520687 OR1J2Q8NGS2 313 aa8.78□□□□□ -1
SPARC-202ENST00000520687 KCNG3Q8TAE7 436 aa8.78□□□□□ -1
SPARC-202ENST00000520687 OR51E1Q8TCB6 317 aa8.78□□□□□ -1
SPARC-202ENST00000520687 GIMAP1Q8WWP7 306 aa8.78□□□□□ -1
SPARC-202ENST00000520687 PP6455Q8WZ26 134 aa8.78□□□□□ -1
SPARC-202ENST00000520687 TMEM45BQ96B21 275 aa8.78□□□□□ -1
SPARC-202ENST00000520687 CPNE2Q96FN4 548 aaPredicted RBP8.78□□□□□ -1
SPARC-202ENST00000520687 THOC3Q96J01 351 aaKnown RBP8.78□□□□□ -1
SPARC-202ENST00000520687 ADGRG7Q96K78 797 aa8.78□□□□□ -1
SPARC-202ENST00000520687 SLC25A21Q9BQT8 299 aaPredicted RBP8.78□□□□□ -1
SPARC-202ENST00000520687 ZNF416Q9BWM5 594 aa8.78□□□□□ -1
SPARC-202ENST00000520687 MYOZ1Q9NP98 299 aaPredicted RBP8.78□□□□□ -1
SPARC-202ENST00000520687 SCP2D1Q9UJQ7 156 aa8.78□□□□□ -1
SPARC-202ENST00000520687 NPTNQ9Y639 398 aa8.78□□□□□ -1
SPARC-202ENST00000520687 PTPRBP23467 1997 aa8.77□□□□□ -1.01
SPARC-202ENST00000520687 UBE2QL1A1L167 161 aa8.77□□□□□ -1.01
SPARC-202ENST00000520687 TNFSF11O14788 317 aa8.77□□□□□ -1.01
SPARC-202ENST00000520687 SMAD9O15198 467 aaKnown RBP8.77□□□□□ -1.01
SPARC-202ENST00000520687 RER1O15258 196 aa8.77□□□□□ -1.01
SPARC-202ENST00000520687 SSNA1O43805 119 aa8.77□□□□□ -1.01
SPARC-202ENST00000520687 CREBL2O60519 120 aaPredicted RBP8.77□□□□□ -1.01
SPARC-202ENST00000520687 GMDSO60547 372 aa8.77□□□□□ -1.01
SPARC-202ENST00000520687 CYTIPO60759 359 aa8.77□□□□□ -1.01
SPARC-202ENST00000520687 WDPCPO95876 746 aa8.77□□□□□ -1.01
SPARC-202ENST00000520687 HPNP05981 417 aa8.77□□□□□ -1.01
SPARC-202ENST00000520687 GTF2F2P13984 249 aa8.77□□□□□ -1.01
SPARC-202ENST00000520687 POU3F2P20265 443 aaPredicted RBP8.77□□□□□ -1.01
SPARC-202ENST00000520687 MPZP25189 248 aa8.77□□□□□ -1.01
SPARC-202ENST00000520687 CDAP32320 146 aa8.77□□□□□ -1.01
SPARC-202ENST00000520687 ZNF93P35789 620 aaPredicted RBP8.77□□□□□ -1.01
SPARC-202ENST00000520687 ALDH3B1P43353 468 aa8.77□□□□□ -1.01
SPARC-202ENST00000520687 PRKXP51817 358 aa8.77□□□□□ -1.01
SPARC-202ENST00000520687 EFNB2P52799 333 aa8.77□□□□□ -1.01
SPARC-202ENST00000520687 ARPC4P59998 168 aa8.77□□□□□ -1.01
SPARC-202ENST00000520687 RPS18P62269 152 aaKnown RBP8.77□□□□□ -1.01
SPARC-202ENST00000520687 SCRN3Q0VDG4 424 aa8.77□□□□□ -1.01
SPARC-202ENST00000520687 ENDOGQ14249 297 aaKnown RBP8.77□□□□□ -1.01
SPARC-202ENST00000520687 RAB35Q15286 201 aa8.77□□□□□ -1.01
SPARC-202ENST00000520687 OTPQ5XKR4 325 aa8.77□□□□□ -1.01
SPARC-202ENST00000520687 SFRP4Q6FHJ7 346 aaPredicted RBP8.77□□□□□ -1.01
SPARC-202ENST00000520687 DRAM2Q6UX65 266 aa8.77□□□□□ -1.01
SPARC-202ENST00000520687 GLDNQ6ZMI3 551 aaPredicted RBP8.77□□□□□ -1.01
SPARC-202ENST00000520687 ZNF782Q6ZMW2 699 aaPredicted RBP8.77□□□□□ -1.01
SPARC-202ENST00000520687 UTS2BQ765I0 119 aa8.77□□□□□ -1.01
SPARC-202ENST00000520687 GGNQ86UU5 652 aa8.77□□□□□ -1.01
SPARC-202ENST00000520687 CLEC1AQ8NC01 280 aa8.77□□□□□ -1.01
SPARC-202ENST00000520687 OR8B12Q8NGG6 310 aa8.77□□□□□ -1.01
SPARC-202ENST00000520687 CCDC107Q8WV48 283 aa8.77□□□□□ -1.01
SPARC-202ENST00000520687 RELTQ969Z4 430 aa8.77□□□□□ -1.01
SPARC-202ENST00000520687 NABP1Q96AH0 204 aa8.77□□□□□ -1.01
SPARC-202ENST00000520687 SEH1LQ96EE3 360 aa8.77□□□□□ -1.01
SPARC-202ENST00000520687 PGAM5Q96HS1 289 aa8.77□□□□□ -1.01
SPARC-202ENST00000520687 ZNF385AQ96PM9 386 aaKnown RBP8.77□□□□□ -1.01
SPARC-202ENST00000520687 OR10A2Q9H208 303 aa8.77□□□□□ -1.01
SPARC-202ENST00000520687 GPR84Q9NQS5 396 aa8.77□□□□□ -1.01
SPARC-202ENST00000520687 NPDC1Q9NQX5 325 aaPredicted RBP8.77□□□□□ -1.01
SPARC-202ENST00000520687 PARPBPQ9NWS1 579 aa8.77□□□□□ -1.01
SPARC-202ENST00000520687 LRFN1Q9P244 771 aa8.77□□□□□ -1.01
SPARC-202ENST00000520687 RHBDD3Q9Y3P4 386 aa8.77□□□□□ -1.01
SPARC-202ENST00000520687 IGKV3D-15A0A087WSY6 115 aa8.76□□□□□ -1.01
SPARC-202ENST00000520687 ZNF716A6NP11 495 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms