RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 HCCSP53701 268 aa11.96□□□□□ -0.49
VEGFA-221ENST00000520265 LCN2P80188 198 aa11.96□□□□□ -0.49
VEGFA-221ENST00000520265 BCDIN3DQ7Z5W3 292 aaKnown RBP11.96□□□□□ -0.49
VEGFA-221ENST00000520265 OTOSQ8NHW6 89 aa11.96□□□□□ -0.49
VEGFA-221ENST00000520265 IL4I1Q96RQ9 567 aa11.96□□□□□ -0.49
VEGFA-221ENST00000520265 GABARAPL1Q9H0R8 117 aa11.96□□□□□ -0.49
VEGFA-221ENST00000520265 OPA3Q9H6K4 179 aa11.96□□□□□ -0.49
VEGFA-221ENST00000520265 IKZF2Q9UKS7 526 aa11.96□□□□□ -0.49
VEGFA-221ENST00000520265 KLHDC2Q9Y2U9 406 aa11.96□□□□□ -0.49
VEGFA-221ENST00000520265 JMJD1CQ15652 2540 aa11.95□□□□□ -0.5
VEGFA-221ENST00000520265 TRAV20A0A0B4J274 112 aa11.95□□□□□ -0.5
VEGFA-221ENST00000520265 hCG_1807616A0A1W2PRN6 198 aa11.95□□□□□ -0.5
VEGFA-221ENST00000520265 IGHV2-70P01814 119 aa11.95□□□□□ -0.5
VEGFA-221ENST00000520265 GRPP07492 148 aa11.95□□□□□ -0.5
VEGFA-221ENST00000520265 ANOS1P23352 680 aa11.95□□□□□ -0.5
VEGFA-221ENST00000520265 OTX1P32242 354 aaPredicted RBP11.95□□□□□ -0.5
VEGFA-221ENST00000520265 GNALP38405 381 aa11.95□□□□□ -0.5
VEGFA-221ENST00000520265 OPRL1P41146 370 aa11.95□□□□□ -0.5
VEGFA-221ENST00000520265 ZMYND11Q15326 602 aa11.95□□□□□ -0.5
VEGFA-221ENST00000520265 DCAF12L2Q5VW00 463 aa11.95□□□□□ -0.5
VEGFA-221ENST00000520265 SLC16A9Q7RTY1 509 aa11.95□□□□□ -0.5
VEGFA-221ENST00000520265 C1orf87Q8N0U7 546 aa11.95□□□□□ -0.5
VEGFA-221ENST00000520265 FAM81AQ8TBF8 368 aa11.95□□□□□ -0.5
VEGFA-221ENST00000520265 DUS3LQ96G46 650 aaKnown RBP11.95□□□□□ -0.5
VEGFA-221ENST00000520265 RAB3IPQ96QF0 476 aaPredicted RBP11.95□□□□□ -0.5
VEGFA-221ENST00000520265 CNN2Q99439 309 aaKnown RBP11.95□□□□□ -0.5
VEGFA-221ENST00000520265 PKP2Q99959 881 aa11.95□□□□□ -0.5
VEGFA-221ENST00000520265 SLC22A4Q9H015 551 aa11.95□□□□□ -0.5
VEGFA-221ENST00000520265 MARCH7Q9H992 704 aa11.95□□□□□ -0.5
VEGFA-221ENST00000520265 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.94□□□□□ -0.52e-8■■■□□ 14.7
VEGFA-221ENST00000520265 A0A0G2JMP0 313 aa11.94□□□□□ -0.5
VEGFA-221ENST00000520265 A0A0X1KG70 313 aa11.94□□□□□ -0.5
VEGFA-221ENST00000520265 CCDC182A6NF36 153 aa11.94□□□□□ -0.5
VEGFA-221ENST00000520265 TMEM178BH3BS89 294 aa11.94□□□□□ -0.5
VEGFA-221ENST00000520265 IFNL4K9M1U5 179 aa11.94□□□□□ -0.5
VEGFA-221ENST00000520265 PLPP2O43688 288 aa11.94□□□□□ -0.5
VEGFA-221ENST00000520265 RPS2P15880 293 aaKnown RBP11.94□□□□□ -0.5
VEGFA-221ENST00000520265 SLC2A5P22732 501 aa11.94□□□□□ -0.5
VEGFA-221ENST00000520265 CFL1P23528 166 aaKnown RBP11.94□□□□□ -0.5
VEGFA-221ENST00000520265 EPHA2P29317 976 aa11.94□□□□□ -0.5
VEGFA-221ENST00000520265 MDH2P40926 338 aaKnown RBP11.94□□□□□ -0.5
VEGFA-221ENST00000520265 ACTR3P61158 418 aa11.94□□□□□ -0.5
VEGFA-221ENST00000520265 SLX4IPQ5VYV7 408 aa11.94□□□□□ -0.5
VEGFA-221ENST00000520265 KDM4DQ6B0I6 523 aa11.94□□□□□ -0.5
VEGFA-221ENST00000520265 ZFP1Q6P2D0 407 aa11.94□□□□□ -0.5
VEGFA-221ENST00000520265 KCTD18Q6PI47 426 aaPredicted RBP11.94□□□□□ -0.5
VEGFA-221ENST00000520265 MUC20Q8N307 709 aaPredicted RBP11.94□□□□□ -0.5
VEGFA-221ENST00000520265 OR4M2Q8NGB6 313 aa11.94□□□□□ -0.5
VEGFA-221ENST00000520265 OR52H1Q8NGJ2 320 aa11.94□□□□□ -0.5
VEGFA-221ENST00000520265 TMEM163Q8TC26 289 aa11.94□□□□□ -0.5
VEGFA-221ENST00000520265 TEAD3Q99594 435 aa11.94□□□□□ -0.5
VEGFA-221ENST00000520265 RBM4BQ9BQ04 359 aaKnown RBP11.94□□□□□ -0.5
VEGFA-221ENST00000520265 REPIN1Q9BWE0 567 aaKnown RBP11.94□□□□□ -0.5
VEGFA-221ENST00000520265 PAPOLGQ9BWT3 736 aaKnown RBP11.94□□□□□ -0.5
VEGFA-221ENST00000520265 FN3KRPQ9HA64 309 aa11.94□□□□□ -0.5
VEGFA-221ENST00000520265 IMPAD1Q9NX62 359 aa11.94□□□□□ -0.5
VEGFA-221ENST00000520265 LRP12Q9Y561 859 aa11.94□□□□□ -0.5
VEGFA-221ENST00000520265 SLC22A31A6NKX4 558 aa11.93□□□□□ -0.5
VEGFA-221ENST00000520265 ZAR1LA6NP61 321 aa11.93□□□□□ -0.5
VEGFA-221ENST00000520265 FAM20BO75063 409 aa11.93□□□□□ -0.5
VEGFA-221ENST00000520265 PNPP00491 289 aa11.93□□□□□ -0.5
VEGFA-221ENST00000520265 ATP6V1E1P36543 226 aa11.93□□□□□ -0.5
VEGFA-221ENST00000520265 PSMA6P60900 246 aaKnown RBP11.93□□□□□ -0.5
VEGFA-221ENST00000520265 MZT1Q08AG7 82 aa11.93□□□□□ -0.5
VEGFA-221ENST00000520265 ESCO2Q56NI9 601 aa11.93□□□□□ -0.5
VEGFA-221ENST00000520265 FAM201AQ5SY85 155 aa11.93□□□□□ -0.5
VEGFA-221ENST00000520265 KCTD8Q6ZWB6 473 aa11.93□□□□□ -0.5
VEGFA-221ENST00000520265 MEPCEQ7L2J0 689 aaKnown RBP11.93□□□□□ -0.5
VEGFA-221ENST00000520265 GID4Q8IVV7 300 aa11.93□□□□□ -0.5
VEGFA-221ENST00000520265 C10orf67Q8IYJ2 551 aa11.93□□□□□ -0.5
VEGFA-221ENST00000520265 C19orf18Q8NEA5 215 aa11.93□□□□□ -0.5
VEGFA-221ENST00000520265 DEFB108BQ8NET1 73 aa11.93□□□□□ -0.5
VEGFA-221ENST00000520265 SGK3Q96BR1 496 aa11.93□□□□□ -0.5
VEGFA-221ENST00000520265 C1orf159Q96HA4 380 aa11.93□□□□□ -0.5
VEGFA-221ENST00000520265 TBX5Q99593 518 aa11.93□□□□□ -0.5
VEGFA-221ENST00000520265 MROQ9BYG7 248 aa11.93□□□□□ -0.5
VEGFA-221ENST00000520265 YIPF3Q9GZM5 350 aa11.93□□□□□ -0.5
VEGFA-221ENST00000520265 OCEL1Q9H607 264 aa11.93□□□□□ -0.5
VEGFA-221ENST00000520265 METTL17Q9H7H0 456 aaPredicted RBP11.93□□□□□ -0.5
VEGFA-221ENST00000520265 MRPL15Q9P015 296 aaKnown RBP11.93□□□□□ -0.5
VEGFA-221ENST00000520265 TMEM14AQ9Y6G1 99 aa11.93□□□□□ -0.5
VEGFA-221ENST00000520265 RNF212BA8MTL3 300 aa11.92□□□□□ -0.5
VEGFA-221ENST00000520265 EI24O14681 340 aa11.92□□□□□ -0.5
VEGFA-221ENST00000520265 GMDSO60547 372 aa11.92□□□□□ -0.5
VEGFA-221ENST00000520265 FOXH1O75593 365 aa11.92□□□□□ -0.5
VEGFA-221ENST00000520265 APOL3O95236 402 aa11.92□□□□□ -0.5
VEGFA-221ENST00000520265 POLR2IP36954 125 aaKnown RBP11.92□□□□□ -0.5
VEGFA-221ENST00000520265 CD200P41217 278 aa11.92□□□□□ -0.5
VEGFA-221ENST00000520265 FAM3AP98173 230 aa11.92□□□□□ -0.5
VEGFA-221ENST00000520265 MAB21L1Q13394 359 aa11.92□□□□□ -0.5
VEGFA-221ENST00000520265 OR8B8Q15620 311 aa11.92□□□□□ -0.5
VEGFA-221ENST00000520265 MPPED2Q15777 294 aa11.92□□□□□ -0.5
VEGFA-221ENST00000520265 ZIK1Q3SY52 487 aaPredicted RBP11.92□□□□□ -0.5
VEGFA-221ENST00000520265 TMEM155Q4W5P6 130 aa11.92□□□□□ -0.5
VEGFA-221ENST00000520265 NXNL2Q5VZ03 156 aa11.92□□□□□ -0.5
VEGFA-221ENST00000520265 C12orf73Q69YU5 71 aa11.92□□□□□ -0.5
VEGFA-221ENST00000520265 SLC35F2Q8IXU6 374 aa11.92□□□□□ -0.5
VEGFA-221ENST00000520265 FTMTQ8N4E7 242 aa11.92□□□□□ -0.5
VEGFA-221ENST00000520265 OR8B12Q8NGG6 310 aa11.92□□□□□ -0.5
VEGFA-221ENST00000520265 OR51G2Q8NGK0 314 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms