RNA–Protein interactions for RNA: ENST00000517239.1

RNU4-60P-201, Transcript of RNA, U4 small nuclear 60, pseudogene, humanhuman

BASIC

Gene RNU4-60P, Length 135 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-60P-201ENST00000517239 LMO4P61968 165 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 RPL32P62910 135 aaKnown RBP3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 SLC35A1P78382 337 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 FAM3AP98173 230 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 FKBP3Q00688 224 aaKnown RBP3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 MXD1Q05195 221 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 ZNF146Q15072 292 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 SRSF7Q16629 238 aaKnown RBP eCLIP3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 NRF1Q16656 503 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 TTLL9Q3SXZ7 439 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 YIF1BQ5BJH7 314 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 SAXO2Q658L1 398 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 UFSP1Q6NVU6 142 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 FAM131AQ6UXB0 335 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 Q6ZRP5 223 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 P2RY8Q86VZ1 359 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 THOC6Q86W42 341 aaKnown RBP3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 SLC30A8Q8IWU4 369 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 C9orf40Q8IXQ3 194 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 NUP37Q8NFH4 326 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 PXT1Q8NFP0 134 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 BEST4Q8NFU0 473 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 OR1M1Q8NGA1 313 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 SSC4DQ8WTU2 575 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 ZBTB9Q96C00 473 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 PSMB7Q99436 277 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 CLEC7AQ9BXN2 247 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 COA1Q9GZY4 146 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 ARV1Q9H2C2 271 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 PRORYQ9H606 182 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 RPF2Q9H7B2 306 aaKnown RBP3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 C19orf12Q9NSK7 152 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 PLCXD1Q9NUJ7 323 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 IL17CQ9P0M4 197 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 OR1A1Q9P1Q5 309 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 ALG5Q9Y673 324 aa3.17□□□□□ -1.9
RNU4-60P-201ENST00000517239 FLT4P35916 1363 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 EIF3AQ14152 1382 aaKnown RBP3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 CEMIPQ8WUJ3 1361 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 A0A087WW49 117 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 A6NDN8 102 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 DNAJC9-AS1A6NH13 148 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 SYCE1LA8MT33 242 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 AZIN1O14977 448 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 FADS1O60427 444 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 RAMP2O60895 175 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 GLSO94925 669 aaPredicted RBP3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 SEMA4FO95754 770 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 CT45A10P0DMU9 189 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 HIST1H1EP10412 219 aaKnown RBP3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 PAX1P15863 534 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 MARK3P27448 753 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 IFNGR2P38484 337 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 CYB561P49447 251 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 KLK7P49862 253 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 DLX1P56177 255 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 RWDD2BP57060 319 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 RAB38P57729 211 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 ARG2P78540 354 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 FCHO2Q0JRZ9 810 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 ATP6AP1Q15904 470 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 CCL14Q16627 93 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 MICAQ29983 383 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 HLA-DRB5Q30154 266 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 CEACAM21Q3KPI0 293 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 METTL21CQ5VZV1 264 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 CST9Q5W186 159 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 REG3GQ6UW15 175 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 DNM1P46Q6ZS02 220 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 PPP1R27Q86WC6 154 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 C6orf223Q8N319 242 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 CIARTQ8N365 385 aaPredicted RBP3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 PNKDQ8N490 385 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 SPICQ8N5J4 248 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 ACBD4Q8NC06 268 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 CHCHD10Q8WYQ3 142 aaPredicted RBP3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 DDIT4LQ96D03 193 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 PGLYRP3Q96LB9 341 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 P2RX4Q99571 388 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 PHB2Q99623 299 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 HOPXQ9BPY8 73 aaPredicted RBP3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 KRTAP3-1Q9BYR8 98 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 SELENOIQ9C0D9 397 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 OR51B5Q9H339 312 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 SH2D2AQ9NP31 389 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 TAS2R7Q9NYW3 318 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 TMEM9Q9P0T7 183 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 VWA8A3KMH1 1905 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 CAMTA1Q9Y6Y1 1673 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 MAPK8IP3Q9UPT6 1336 aa3.16□□□□□ -1.9
RNU4-60P-201ENST00000517239 PHF3Q92576 2039 aaKnown RBP3.15□□□□□ -1.9
RNU4-60P-201ENST00000517239 DAPL1A0PJW8 107 aa3.15□□□□□ -1.91
RNU4-60P-201ENST00000517239 FUOMA2VDF0 154 aa3.15□□□□□ -1.91
RNU4-60P-201ENST00000517239 DHRS7CA6NNS2 312 aa3.15□□□□□ -1.91
RNU4-60P-201ENST00000517239 C12orf77C9JDV5 145 aa3.15□□□□□ -1.91
RNU4-60P-201ENST00000517239 KCNK1O00180 336 aa3.15□□□□□ -1.91
RNU4-60P-201ENST00000517239 PSMD12O00232 456 aaPredicted RBP3.15□□□□□ -1.91
RNU4-60P-201ENST00000517239 SLC17A2O00624 439 aa3.15□□□□□ -1.91
RNU4-60P-201ENST00000517239 CDX4O14627 284 aaPredicted RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms