RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 PLEKHA8Q96JA3 519 aa8.17□□□□□ -1.1
RNF4-221ENST00000513643 HRASLS5Q96KN8 279 aa8.17□□□□□ -1.1
RNF4-221ENST00000513643 PRRG3Q9BZD7 231 aa8.17□□□□□ -1.1
RNF4-221ENST00000513643 RGCCQ9H4X1 137 aa8.17□□□□□ -1.1
RNF4-221ENST00000513643 NIPAL2Q9H841 368 aa8.17□□□□□ -1.1
RNF4-221ENST00000513643 ADGRL4Q9HBW9 690 aa8.17□□□□□ -1.1
RNF4-221ENST00000513643 S100A14Q9HCY8 104 aa8.17□□□□□ -1.1
RNF4-221ENST00000513643 G6PC2Q9NQR9 355 aa8.17□□□□□ -1.1
RNF4-221ENST00000513643 COPS3Q9UNS2 423 aa8.17□□□□□ -1.1
RNF4-221ENST00000513643 PPP1R3CQ9UQK1 317 aa8.17□□□□□ -1.1
RNF4-221ENST00000513643 DYSFO75923 2080 aa8.17□□□□□ -1.1
RNF4-221ENST00000513643 PPIAL4EA0A075B759 164 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 PPIAL4CA0A0B4J2A2 164 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 SAC3D1A6NKF1 404 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 SLC22A31A6NKX4 558 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 PPIAL4DF5H284 164 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 J3QRE1 110 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 M0R129 80 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 TPD52L2O43399 206 aaKnown RBP8.16□□□□□ -1.1
RNF4-221ENST00000513643 ZNF254O75437 659 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 HLA-DPB1P04440 258 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 MSMBP08118 114 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 FAM157CP0CG43 387 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 PPIAL4FP0DN26 164 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 HTR1FP30939 366 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 NAA10P41227 235 aaPredicted RBP8.16□□□□□ -1.1
RNF4-221ENST00000513643 SLC6A9P48067 706 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 SRP9P49458 86 aaKnown RBP8.16□□□□□ -1.1
RNF4-221ENST00000513643 ALDH3A2P51648 485 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 PSMA6P60900 246 aaKnown RBP8.16□□□□□ -1.1
RNF4-221ENST00000513643 TMED1Q13445 227 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 ZMYND11Q15326 602 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 TAF13Q15543 124 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 CHRFAM7AQ494W8 412 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 FAM120AOSQ5T036 256 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 ZNF684Q5T5D7 378 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 Q6ZSR3 168 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 SPATC1Q76KD6 591 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 MRPL21Q7Z2W9 205 aaKnown RBP8.16□□□□□ -1.1
RNF4-221ENST00000513643 C11orf53Q8IXP5 236 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 ZNF679Q8IYX0 411 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 BHLHE23Q8NDY6 225 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 THEM6Q8WUY1 208 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 ASB17Q8WXJ9 295 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 TIMD4Q96H15 378 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 LYZL4Q96KX0 146 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 OR8B4Q96RC9 309 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 IL4I1Q96RQ9 567 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 MNTQ99583 582 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 SLC29A1Q99808 456 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 SP140LQ9H930 580 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 TMEM165Q9HC07 324 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 FAM206AQ9NX38 181 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 LPAR3Q9UBY5 353 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 WARS2Q9UGM6 360 aaKnown RBP8.16□□□□□ -1.1
RNF4-221ENST00000513643 KCNS2Q9ULS6 477 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 LRP12Q9Y561 859 aa8.16□□□□□ -1.1
RNF4-221ENST00000513643 ANK2Q01484 3957 aa8.15□□□□□ -1.1
RNF4-221ENST00000513643 TRAV20A0A0B4J274 112 aa8.15□□□□□ -1.1
RNF4-221ENST00000513643 A0A0U1RQV5 110 aa8.15□□□□□ -1.1
RNF4-221ENST00000513643 KIAA1324LA8MWY0 1029 aaPredicted RBP8.15□□□□□ -1.1
RNF4-221ENST00000513643 EI24O14681 340 aa8.15□□□□□ -1.1
RNF4-221ENST00000513643 PLPP2O43688 288 aa8.15□□□□□ -1.1
RNF4-221ENST00000513643 CST4P01036 141 aa8.15□□□□□ -1.1
RNF4-221ENST00000513643 LHBP01229 141 aa8.15□□□□□ -1.1
RNF4-221ENST00000513643 WNT2P09544 360 aa8.15□□□□□ -1.1
RNF4-221ENST00000513643 H2BFMP0C1H6 154 aa8.15□□□□□ -1.1
RNF4-221ENST00000513643 SBK2P0C263 348 aa8.15□□□□□ -1.1
RNF4-221ENST00000513643 GABRB1P18505 474 aa8.15□□□□□ -1.1
RNF4-221ENST00000513643 CA6P23280 308 aa8.15□□□□□ -1.1
RNF4-221ENST00000513643 CFL1P23528 166 aaKnown RBP8.15□□□□□ -1.1
RNF4-221ENST00000513643 ACKR3P25106 362 aa8.15□□□□□ -1.1
RNF4-221ENST00000513643 ZFP36P26651 326 aaKnown RBP8.15□□□□□ -1.1
RNF4-221ENST00000513643 HSD11B1P28845 292 aa8.15□□□□□ -1.1
RNF4-221ENST00000513643 CFHR2P36980 270 aa8.15□□□□□ -1.1
RNF4-221ENST00000513643 GSK3AP49840 483 aa8.15□□□□□ -1.1
RNF4-221ENST00000513643 SNRPGP62308 76 aaKnown RBP8.15□□□□□ -1.1
RNF4-221ENST00000513643 BTG1P62324 171 aa8.15□□□□□ -1.1
RNF4-221ENST00000513643 TUSC1Q2TAM9 212 aa8.15□□□□□ -1.1
RNF4-221ENST00000513643 CR1LQ2VPA4 569 aa8.15□□□□□ -1.1
RNF4-221ENST00000513643 FAM76BQ5HYJ3 339 aa8.15□□□□□ -1.1
RNF4-221ENST00000513643 LCN1P1Q5VSP4 162 aa8.15□□□□□ -1.1
RNF4-221ENST00000513643 LRRN1Q6UXK5 716 aa8.15□□□□□ -1.1
RNF4-221ENST00000513643 C1orf229Q6ZS94 237 aaPredicted RBP8.15□□□□□ -1.1
RNF4-221ENST00000513643 FAM57BQ71RH2 274 aa8.15□□□□□ -1.1
RNF4-221ENST00000513643 GID4Q8IVV7 300 aa8.15□□□□□ -1.1
RNF4-221ENST00000513643 CBR4Q8N4T8 237 aa8.15□□□□□ -1.1
RNF4-221ENST00000513643 RFLNBQ8N5W9 214 aa8.15□□□□□ -1.1
RNF4-221ENST00000513643 SPERTQ8NA61 448 aa8.15□□□□□ -1.1
RNF4-221ENST00000513643 OR56B2PQ8NGI1 322 aa8.15□□□□□ -1.1
RNF4-221ENST00000513643 SPRYD4Q8WW59 207 aaPredicted RBP8.15□□□□□ -1.1
RNF4-221ENST00000513643 UBE2FQ969M7 185 aa8.15□□□□□ -1.1
RNF4-221ENST00000513643 RNF166Q96A37 237 aaPredicted RBP8.15□□□□□ -1.1
RNF4-221ENST00000513643 EME1Q96AY2 570 aa8.15□□□□□ -1.1
RNF4-221ENST00000513643 DACT3Q96B18 629 aaPredicted RBP8.15□□□□□ -1.1
RNF4-221ENST00000513643 TMEM186Q96B77 213 aa8.15□□□□□ -1.1
RNF4-221ENST00000513643 REEP6Q96HR9 211 aa8.15□□□□□ -1.1
RNF4-221ENST00000513643 MBOAT4Q96T53 435 aa8.15□□□□□ -1.1
RNF4-221ENST00000513643 CNN2Q99439 309 aaKnown RBP8.15□□□□□ -1.1
RNF4-221ENST00000513643 OR10A2Q9H208 303 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms