RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 DMRTC1Q5HYR2 192 aa8.5□□□□□ -1.05
CLDND1-227ENST00000513452 CASC10Q5T4H9 136 aa8.5□□□□□ -1.05
CLDND1-227ENST00000513452 HCP5Q6MZN7 132 aa8.5□□□□□ -1.05
CLDND1-227ENST00000513452 OAFQ86UD1 273 aa8.5□□□□□ -1.05
CLDND1-227ENST00000513452 ANKRD42Q8N9B4 389 aa8.5□□□□□ -1.05
CLDND1-227ENST00000513452 GJC3Q8NFK1 279 aa8.5□□□□□ -1.05
CLDND1-227ENST00000513452 C8orf46Q8TAG6 207 aa8.5□□□□□ -1.05
CLDND1-227ENST00000513452 LRRC29Q8WV35 223 aa8.5□□□□□ -1.05
CLDND1-227ENST00000513452 DPF1Q92782 380 aa8.5□□□□□ -1.05
CLDND1-227ENST00000513452 SEH1LQ96EE3 360 aa8.5□□□□□ -1.05
CLDND1-227ENST00000513452 AJUBAQ96IF1 538 aa8.5□□□□□ -1.05
CLDND1-227ENST00000513452 ZNF570Q96NI8 536 aa8.5□□□□□ -1.05
CLDND1-227ENST00000513452 CDCA4Q9BXL8 241 aa8.5□□□□□ -1.05
CLDND1-227ENST00000513452 WNT10AQ9GZT5 417 aa8.5□□□□□ -1.05
CLDND1-227ENST00000513452 CCDC167Q9P0B6 97 aa8.5□□□□□ -1.05
CLDND1-227ENST00000513452 NDUFAF1Q9Y375 327 aa8.5□□□□□ -1.05
CLDND1-227ENST00000513452 SF3B6Q9Y3B4 125 aaKnown RBP8.5□□□□□ -1.05
CLDND1-227ENST00000513452 LHFPL6Q9Y693 200 aa8.5□□□□□ -1.05
CLDND1-227ENST00000513452 RYR2Q92736 4967 aa8.5□□□□□ -1.05
CLDND1-227ENST00000513452 A0A1W2PQ09 198 aa8.49□□□□□ -1.05
CLDND1-227ENST00000513452 M0R1W7 72 aa8.49□□□□□ -1.05
CLDND1-227ENST00000513452 IMPA2O14732 288 aa8.49□□□□□ -1.05
CLDND1-227ENST00000513452 RGS16O15492 202 aaPredicted RBP8.49□□□□□ -1.05
CLDND1-227ENST00000513452 KHDRBS3O75525 346 aaKnown RBP8.49□□□□□ -1.05
CLDND1-227ENST00000513452 MUC1P15941 1255 aaPredicted RBP8.49□□□□□ -1.05
CLDND1-227ENST00000513452 GGT2P36268 569 aa8.49□□□□□ -1.05
CLDND1-227ENST00000513452 CENPAP49450 140 aa8.49□□□□□ -1.05
CLDND1-227ENST00000513452 HIST1H3AP68431 136 aa8.49□□□□□ -1.05
CLDND1-227ENST00000513452 KRR1Q13601 381 aaKnown RBP8.49□□□□□ -1.05
CLDND1-227ENST00000513452 AANATQ16613 207 aa8.49□□□□□ -1.05
CLDND1-227ENST00000513452 TMEM95Q3KNT9 176 aa8.49□□□□□ -1.05
CLDND1-227ENST00000513452 HIST2H3PS2Q5TEC6 136 aa8.49□□□□□ -1.05
CLDND1-227ENST00000513452 DLEU7Q6UYE1 221 aa8.49□□□□□ -1.05
CLDND1-227ENST00000513452 CCDC121Q6ZUS5 278 aa8.49□□□□□ -1.05
CLDND1-227ENST00000513452 HIST2H3AQ71DI3 136 aa8.49□□□□□ -1.05
CLDND1-227ENST00000513452 NAA40Q86UY6 237 aa8.49□□□□□ -1.05
CLDND1-227ENST00000513452 LNX2Q8N448 690 aa8.49□□□□□ -1.05
CLDND1-227ENST00000513452 RASSF5Q8WWW0 418 aa8.49□□□□□ -1.05
CLDND1-227ENST00000513452 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.49□□□□□ -1.05
CLDND1-227ENST00000513452 CHID1Q9BWS9 393 aa8.49□□□□□ -1.05
CLDND1-227ENST00000513452 POLR2J2Q9GZM3 115 aaKnown RBP8.49□□□□□ -1.05
CLDND1-227ENST00000513452 POLR2J3Q9H1A7 115 aaKnown RBP8.49□□□□□ -1.05
CLDND1-227ENST00000513452 MEGF9Q9H1U4 602 aa8.49□□□□□ -1.05
CLDND1-227ENST00000513452 INPP5EQ9NRR6 644 aa8.49□□□□□ -1.05
CLDND1-227ENST00000513452 ADA2Q9NZK5 511 aa8.49□□□□□ -1.05
CLDND1-227ENST00000513452 TRBV23-1A0A0A0MS06 115 aa8.48□□□□□ -1.05
CLDND1-227ENST00000513452 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.48□□□□□ -1.05
CLDND1-227ENST00000513452 GGT3PA6NGU5 568 aa8.48□□□□□ -1.05
CLDND1-227ENST00000513452 EFCAB9A8MZ26 197 aa8.48□□□□□ -1.05
CLDND1-227ENST00000513452 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.48□□□□□ -1.05
CLDND1-227ENST00000513452 AHCYL1O43865 530 aa8.48□□□□□ -1.05
CLDND1-227ENST00000513452 CHRM2P08172 466 aa8.48□□□□□ -1.05
CLDND1-227ENST00000513452 CD14P08571 375 aa8.48□□□□□ -1.05
CLDND1-227ENST00000513452 VDAC2P45880 294 aaPredicted RBP8.48□□□□□ -1.05
CLDND1-227ENST00000513452 OR1E2P47887 323 aa8.48□□□□□ -1.05
CLDND1-227ENST00000513452 MRPL19P49406 292 aaKnown RBP8.48□□□□□ -1.05
CLDND1-227ENST00000513452 GSK3BP49841 420 aa8.48□□□□□ -1.05
CLDND1-227ENST00000513452 GMFBP60983 142 aa8.48□□□□□ -1.05
CLDND1-227ENST00000513452 CSNK2BP67870 215 aa8.48□□□□□ -1.05
CLDND1-227ENST00000513452 CD83Q01151 205 aa8.48□□□□□ -1.05
CLDND1-227ENST00000513452 TRAP1Q12931 704 aaKnown RBP8.48□□□□□ -1.05
CLDND1-227ENST00000513452 BLMHQ13867 455 aa8.48□□□□□ -1.05
CLDND1-227ENST00000513452 CNN3Q15417 329 aaKnown RBP8.48□□□□□ -1.05
CLDND1-227ENST00000513452 KCNMB1Q16558 191 aa8.48□□□□□ -1.05
CLDND1-227ENST00000513452 KRTAP27-1Q3LI81 207 aa8.48□□□□□ -1.05
CLDND1-227ENST00000513452 PLA1AQ53H76 456 aa8.48□□□□□ -1.05
CLDND1-227ENST00000513452 CFAP77Q6ZQR2 320 aa8.48□□□□□ -1.05
CLDND1-227ENST00000513452 FAM122BQ7Z309 247 aa8.48□□□□□ -1.05
CLDND1-227ENST00000513452 DHDDSQ86SQ9 333 aa8.48□□□□□ -1.05
CLDND1-227ENST00000513452 TMEM219Q86XT9 240 aa8.48□□□□□ -1.05
CLDND1-227ENST00000513452 LINC00346Q8IVM7 164 aa8.48□□□□□ -1.05
CLDND1-227ENST00000513452 NRMQ8IXM6 262 aa8.48□□□□□ -1.05
CLDND1-227ENST00000513452 OR5AU1Q8NGC0 362 aa8.48□□□□□ -1.05
CLDND1-227ENST00000513452 OR5T2Q8NGG2 359 aa8.48□□□□□ -1.05
CLDND1-227ENST00000513452 OR2AE1Q8NHA4 323 aa8.48□□□□□ -1.05
CLDND1-227ENST00000513452 MUC7Q8TAX7 377 aa8.48□□□□□ -1.05
CLDND1-227ENST00000513452 PIFOQ8TCI5 191 aa8.48□□□□□ -1.05
CLDND1-227ENST00000513452 DUS3LQ96G46 650 aaKnown RBP8.48□□□□□ -1.05
CLDND1-227ENST00000513452 PITX2Q99697 317 aa8.48□□□□□ -1.05
CLDND1-227ENST00000513452 PRSS22Q9GZN4 317 aa8.48□□□□□ -1.05
CLDND1-227ENST00000513452 MUC13Q9H3R2 512 aa8.48□□□□□ -1.05
CLDND1-227ENST00000513452 C14orf119Q9NWQ9 140 aa8.48□□□□□ -1.05
CLDND1-227ENST00000513452 LCE6AA0A183 80 aa8.47□□□□□ -1.05
CLDND1-227ENST00000513452 NKX6-3A6NJ46 265 aa8.47□□□□□ -1.05
CLDND1-227ENST00000513452 H0YAE9 185 aa8.47□□□□□ -1.05
CLDND1-227ENST00000513452 BHLHE40O14503 412 aa8.47□□□□□ -1.05
CLDND1-227ENST00000513452 TFF1P04155 84 aa8.47□□□□□ -1.05
CLDND1-227ENST00000513452 CCDC159P0C7I6 412 aa8.47□□□□□ -1.05
CLDND1-227ENST00000513452 AMY2BP19961 511 aa8.47□□□□□ -1.05
CLDND1-227ENST00000513452 PAICSP22234 425 aaKnown RBP8.47□□□□□ -1.05
CLDND1-227ENST00000513452 ANOS1P23352 680 aa8.47□□□□□ -1.05
CLDND1-227ENST00000513452 LMO1P25800 156 aa8.47□□□□□ -1.05
CLDND1-227ENST00000513452 POU1F1P28069 291 aa8.47□□□□□ -1.05
CLDND1-227ENST00000513452 GPR4P46093 362 aa8.47□□□□□ -1.05
CLDND1-227ENST00000513452 TGM4P49221 684 aa8.47□□□□□ -1.05
CLDND1-227ENST00000513452 ZNF92Q03936 586 aa8.47□□□□□ -1.05
CLDND1-227ENST00000513452 SNAI3Q3KNW1 292 aa8.47□□□□□ -1.05
CLDND1-227ENST00000513452 ANKDD1AQ495B1 522 aa8.47□□□□□ -1.05
CLDND1-227ENST00000513452 AGKQ53H12 422 aa8.47□□□□□ -1.05
CLDND1-227ENST00000513452 RABL3Q5HYI8 236 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms